RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 KCTD1Q719H9 257 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 NECAB2Q7Z6G3 386 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 SIRT2Q8IXJ6 389 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 NXPE1Q8N323 547 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 WDR66Q8TBY9 1149 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 SH3RF2Q8TEC5 729 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 TSPAN17Q96FV3 270 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 HOMER2Q9NSB8 354 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 MYOTQ9UBF9 498 aa6.83□□□□□ -1.32
RFC4-212ENST00000479307 EFCAB5A4FU69 1503 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 H7C1D1 291 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 MAN2B1O00754 1011 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 SGSM2O43147 1006 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 GPR39O43194 453 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 FKBP9O95302 570 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 GLI1P08151 1106 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 YBX3P16989 372 aaKnown RBP eCLIP6.82□□□□□ -1.329e-8■■□□□ 13
RFC4-212ENST00000479307 GJA4P35212 333 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 ADCYAP1R1P41586 468 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 MAPKAPK2P49137 400 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 GALK1P51570 392 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 KPNA1P52294 538 aaPredicted RBP6.82□□□□□ -1.32
RFC4-212ENST00000479307 IRF9Q00978 393 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 STAT4Q14765 748 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 ADGRF1Q5T601 910 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 FKBP9P1Q75LS8 142 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 C11orf74Q86VG3 221 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 ZSWIM9Q86XI8 627 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 SPATS2Q86XZ4 545 aaKnown RBP6.82□□□□□ -1.32
RFC4-212ENST00000479307 PTRH1Q86Y79 214 aaKnown RBP6.82□□□□□ -1.32
RFC4-212ENST00000479307 NOSTRINQ8IVI9 506 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 ASH2LQ9UBL3 628 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 DBR1Q9UK59 544 aaKnown RBP6.82□□□□□ -1.32
RFC4-212ENST00000479307 PCDHB4Q9Y5E5 795 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 ATP23Q9Y6H3 246 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 AKNAQ7Z591 1439 aa6.82□□□□□ -1.32
RFC4-212ENST00000479307 ZFYVE16Q7Z3T8 1539 aa6.81□□□□□ -1.32
RFC4-212ENST00000479307 OR14I1A6ND48 311 aa6.81□□□□□ -1.32
RFC4-212ENST00000479307 F8W031 263 aaPredicted RBP6.81□□□□□ -1.32
RFC4-212ENST00000479307 HRKO00198 91 aa6.81□□□□□ -1.32
RFC4-212ENST00000479307 ZBTB48P10074 688 aaPredicted RBP6.81□□□□□ -1.32
RFC4-212ENST00000479307 ATP2A2P16615 1042 aaKnown RBP6.81□□□□□ -1.32
RFC4-212ENST00000479307 RAB3GAP1Q15042 981 aa6.81□□□□□ -1.32
RFC4-212ENST00000479307 ZNF174Q15697 407 aa6.81□□□□□ -1.32
RFC4-212ENST00000479307 KCNMB1Q16558 191 aa6.81□□□□□ -1.32
RFC4-212ENST00000479307 SKOR2Q2VWA4 1001 aaPredicted RBP6.81□□□□□ -1.32
RFC4-212ENST00000479307 FYB2Q5VWT5 728 aa6.81□□□□□ -1.32
RFC4-212ENST00000479307 RPTNQ6XPR3 784 aa6.81□□□□□ -1.32
RFC4-212ENST00000479307 MILR1Q7Z6M3 343 aa6.81□□□□□ -1.32
RFC4-212ENST00000479307 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.81□□□□□ -1.32
RFC4-212ENST00000479307 EFHBQ8N7U6 833 aa6.81□□□□□ -1.32
RFC4-212ENST00000479307 TTLL11Q8NHH1 800 aa6.81□□□□□ -1.32
RFC4-212ENST00000479307 DDX56Q9NY93 547 aaKnown RBP6.81□□□□□ -1.32
RFC4-212ENST00000479307 PALD1Q9ULE6 856 aa6.81□□□□□ -1.32
RFC4-212ENST00000479307 NCOA1Q15788 1441 aa6.81□□□□□ -1.32
RFC4-212ENST00000479307 ZC3H12DA2A288 527 aaKnown RBP6.8□□□□□ -1.32
RFC4-212ENST00000479307 NUDT19A8MXV4 375 aa6.8□□□□□ -1.32
RFC4-212ENST00000479307 NEMP1O14524 444 aa6.8□□□□□ -1.32
RFC4-212ENST00000479307 SLC27A2O14975 620 aa6.8□□□□□ -1.32
RFC4-212ENST00000479307 ULK1O75385 1050 aa6.8□□□□□ -1.32
RFC4-212ENST00000479307 FAPQ12884 760 aa6.8□□□□□ -1.32
RFC4-212ENST00000479307 FHOD3Q2V2M9 1422 aa6.8□□□□□ -1.32
RFC4-212ENST00000479307 CREB3L3Q68CJ9 461 aa6.8□□□□□ -1.32
RFC4-212ENST00000479307 ZC3H14Q6PJT7 736 aaKnown RBP6.8□□□□□ -1.32
RFC4-212ENST00000479307 PASD1Q8IV76 773 aa6.8□□□□□ -1.32
RFC4-212ENST00000479307 CHTF18Q8WVB6 975 aa6.8□□□□□ -1.32
RFC4-212ENST00000479307 EMC7Q9NPA0 242 aa6.8□□□□□ -1.32
RFC4-212ENST00000479307 THG1LQ9NWX6 298 aaKnown RBP6.8□□□□□ -1.32
RFC4-212ENST00000479307 SIT1Q9Y3P8 196 aa6.8□□□□□ -1.32
RFC4-212ENST00000479307 SPO11Q9Y5K1 396 aa6.8□□□□□ -1.32
RFC4-212ENST00000479307 B3GALT1Q9Y5Z6 326 aa6.8□□□□□ -1.32
RFC4-212ENST00000479307 CFAP74Q9C0B2 1584 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 TCRBV5S2A0A599 114 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 PDGFRBP09619 1106 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 JUNBP17275 347 aaPredicted RBP6.79□□□□□ -1.32
RFC4-212ENST00000479307 PTPN1P18031 435 aaKnown RBP6.79□□□□□ -1.32
RFC4-212ENST00000479307 PDE6BP35913 854 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 YBX1P67809 324 aaKnown RBP6.79□□□□□ -1.32
RFC4-212ENST00000479307 EXOSC10Q01780 885 aaKnown RBP6.79□□□□□ -1.32
RFC4-212ENST00000479307 TUSC3Q13454 348 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 PLEKHN1Q494U1 663 aaPredicted RBP6.79□□□□□ -1.32
RFC4-212ENST00000479307 FERMT3Q86UX7 667 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 KRTAP19-1Q8IUB9 90 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 DLG3Q92796 817 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 GPR101Q96P66 508 aaPredicted RBP6.79□□□□□ -1.32
RFC4-212ENST00000479307 CD244Q9BZW8 370 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 PUS7LQ9H0K6 701 aaKnown RBP6.79□□□□□ -1.32
RFC4-212ENST00000479307 PCIF1Q9H4Z3 704 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 ACSS2Q9NR19 701 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 KCNH7Q9NS40 1196 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 OXSMQ9NWU1 459 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 KLHL14Q9P2G3 628 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 MAGI2Q86UL8 1455 aa6.79□□□□□ -1.32
RFC4-212ENST00000479307 C3P01024 1663 aa6.78□□□□□ -1.32
RFC4-212ENST00000479307 SCDO00767 359 aa6.78□□□□□ -1.32
RFC4-212ENST00000479307 KRT37O76014 449 aa6.78□□□□□ -1.32
RFC4-212ENST00000479307 CYP17A1P05093 508 aa6.78□□□□□ -1.32
RFC4-212ENST00000479307 ITGB5P18084 799 aa6.78□□□□□ -1.32
RFC4-212ENST00000479307 HSPA1LP34931 641 aa6.78□□□□□ -1.32
RFC4-212ENST00000479307 GUCY2FP51841 1108 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms