RNA–Protein interactions for RNA: ENST00000479295.1

PTPN18-210, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-210ENST00000479295 CCDC60Q8IWA6 550 aaPredicted RBP11.02□□□□□ -0.65
PTPN18-210ENST00000479295 DIS3L2Q8IYB7 885 aaKnown RBP11.02□□□□□ -0.65
PTPN18-210ENST00000479295 CCDC155Q8N6L0 562 aa11.02□□□□□ -0.65
PTPN18-210ENST00000479295 RDM1Q8NG50 284 aa11.02□□□□□ -0.65
PTPN18-210ENST00000479295 LMBR1Q8WVP7 490 aa11.02□□□□□ -0.65
PTPN18-210ENST00000479295 HERVK_113Q902F9 699 aa11.02□□□□□ -0.65
PTPN18-210ENST00000479295 NAP1L4Q99733 375 aaKnown RBP11.02□□□□□ -0.65
PTPN18-210ENST00000479295 PCDHA10Q9Y5I2 948 aa11.02□□□□□ -0.65
PTPN18-210ENST00000479295 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 TREHO43280 583 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 SLC37A4O43826 429 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 GNAT1P11488 350 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 CKBP12277 381 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 SELPP16109 830 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 SFNP31947 248 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 CCL23P55773 120 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 SP4Q02446 784 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 MKRN4PQ13434 485 aaPredicted RBP11.01□□□□□ -0.65
PTPN18-210ENST00000479295 CUL4AQ13619 759 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 MBTPS1Q14703 1052 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 PLCB4Q15147 1175 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 FAM26DQ5JW98 314 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 PIK3AP1Q6ZUJ8 805 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 ZNF365Q70YC5 407 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 RPUSD2Q8IZ73 545 aaKnown RBP11.01□□□□□ -0.65
PTPN18-210ENST00000479295 ATP6V0A1Q93050 837 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 FAM20AQ96MK3 541 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 FOXP1Q9H334 677 aaPredicted RBP11.01□□□□□ -0.65
PTPN18-210ENST00000479295 BRMS1Q9HCU9 246 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 SETD4Q9NVD3 440 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 LAMA3Q16787 3333 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 IGSF9BQ9UPX0 1349 aa11.01□□□□□ -0.65
PTPN18-210ENST00000479295 TRIP12Q14669 1992 aaPredicted RBP11□□□□□ -0.65
PTPN18-210ENST00000479295 RRN3P2A6NIE6 340 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 WDR64B1ANS9 1081 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 STBD1O95210 358 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 RPLP2P05387 115 aaKnown RBP11□□□□□ -0.65
PTPN18-210ENST00000479295 INSRRP14616 1297 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 SMAD3P84022 425 aaKnown RBP11□□□□□ -0.65
PTPN18-210ENST00000479295 PPFIA1Q13136 1202 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 PPP2R5CQ13362 524 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 GRIK4Q16099 956 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 LRCH2Q5VUJ6 765 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 FAM160B1Q5W0V3 765 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 FAM109BQ6ICB4 259 aaPredicted RBP11□□□□□ -0.65
PTPN18-210ENST00000479295 MIS18BP1Q6P0N0 1132 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 TAF2Q6P1X5 1199 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 LRRC8DQ7L1W4 858 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 RETREG2Q8NC44 543 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 ATP8B4Q8TF62 1192 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 HAS1Q92839 578 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 GLG1Q92896 1179 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 TNPO1Q92973 898 aaKnown RBP11□□□□□ -0.65
PTPN18-210ENST00000479295 SCLYQ96I15 445 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 C8orf76Q96K31 380 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 TEKT3Q9BXF9 490 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 AZI2Q9H6S1 392 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 ZNF302Q9NR11 478 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 DDX25Q9UHL0 483 aaKnown RBP11□□□□□ -0.65
PTPN18-210ENST00000479295 VAV3Q9UKW4 847 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 NOD1Q9Y239 953 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 COL1A2P08123 1366 aa11□□□□□ -0.65
PTPN18-210ENST00000479295 POTEB3A0JP26 581 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 ZBTB42B2RXF5 422 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 DDX39AO00148 427 aaKnown RBP10.99□□□□□ -0.65
PTPN18-210ENST00000479295 WNT7AO00755 349 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 HBP1O60381 514 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 GAS7O60861 476 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 NBNO60934 754 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 FGBP02675 491 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 PSAPP07602 524 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 ACRP10323 421 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 U2AF2P26368 475 aaKnown RBP eCLIP10.99□□□□□ -0.65
PTPN18-210ENST00000479295 JAK3P52333 1124 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 SPIRE1Q08AE8 756 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 MGAT3Q09327 533 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 ORC2Q13416 577 aaPredicted RBP10.99□□□□□ -0.65
PTPN18-210ENST00000479295 TRIM29Q14134 588 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 LETM2Q2VYF4 491 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 ZNF618Q5T7W0 954 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 SWSAP1Q6NVH7 229 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 POTEBQ6S5H4 581 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 BBXQ8WY36 941 aaPredicted RBP10.99□□□□□ -0.65
PTPN18-210ENST00000479295 MTMR9Q96QG7 549 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 UNC45AQ9H3U1 944 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 DISC1Q9NRI5 854 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 PCDHA2Q9Y5H9 948 aa10.99□□□□□ -0.65
PTPN18-210ENST00000479295 SCN5AQ14524 2016 aa10.98□□□□□ -0.65
PTPN18-210ENST00000479295 SMIM35A0A1B0GVV1 85 aa10.98□□□□□ -0.65
PTPN18-210ENST00000479295 ZNF862O60290 1169 aa10.98□□□□□ -0.65
PTPN18-210ENST00000479295 BAIAP3O94812 1187 aa10.98□□□□□ -0.65
PTPN18-210ENST00000479295 SLC34A2O95436 690 aa10.98□□□□□ -0.65
PTPN18-210ENST00000479295 TRAPPC10P48553 1259 aa10.98□□□□□ -0.65
PTPN18-210ENST00000479295 CHMP4BP1P59074 171 aa10.98□□□□□ -0.65
PTPN18-210ENST00000479295 TARBP2Q15633 366 aaKnown RBP10.98□□□□□ -0.65
PTPN18-210ENST00000479295 ZNF484Q5JVG2 852 aa10.98□□□□□ -0.65
PTPN18-210ENST00000479295 RUFY4Q6ZNE9 571 aa10.98□□□□□ -0.65
PTPN18-210ENST00000479295 FAM43BQ6ZT52 329 aaPredicted RBP10.98□□□□□ -0.65
PTPN18-210ENST00000479295 LINC01465Q8N7H1 131 aa10.98□□□□□ -0.65
PTPN18-210ENST00000479295 GJA10Q969M2 543 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms