RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 KLHL18O94889 574 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 GDF5P43026 501 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 PFKPQ01813 784 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 NTRK3Q16288 839 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 KCTD1Q719H9 257 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 JAZF1Q86VZ6 243 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 IFNL3Q8IZI9 196 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 IFNL2Q8IZJ0 200 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 ZNF669Q96BR6 464 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 GNRHR2Q96P88 292 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 TACO1Q9BSH4 297 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 ALG1Q9BT22 464 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 MEGF9Q9H1U4 602 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 IPPKQ9H8X2 491 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 TELO2Q9Y4R8 837 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 FAM47E-STBD1D6RA91 191 aa5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 MUSKO15146 869 aa5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 PDPK1O15530 556 aa5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 ZNF623O75123 536 aa5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 CNOT4O95628 575 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 ENO2P09104 434 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 FGFR1P11362 822 aa5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 SELENOPP49908 381 aa5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 GPR85P60893 370 aa5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 YOD1Q5VVQ6 348 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 SDE2Q6IQ49 451 aa5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 DNERQ8NFT8 737 aa5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 OSBP2Q969R2 916 aa5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 CD244Q9BZW8 370 aa5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 VPS11Q9H270 941 aa5.94□□□□□ -1.46
CDC42BPA-212ENST00000478573 PATE3B3GLJ2 98 aa5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 H0Y858 1186 aa5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 KNG1P01042 644 aa5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 ZNF568Q3ZCX4 644 aa5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 SPDYAQ5MJ70 313 aa5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 ZFPM1Q8IX07 1006 aa5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 LRRC47Q8N1G4 583 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 GIMAP8Q8ND71 665 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 ST13P5Q8NFI4 369 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 LMF1Q96S06 567 aa5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 ZFYVE21Q9BQ24 234 aa5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 SLC39A2Q9NP94 309 aa5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 KCND1Q9NSA2 647 aa5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 TRAF6Q9Y4K3 522 aa5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 BICRAQ9NZM4 1560 aa5.93□□□□□ -1.46
CDC42BPA-212ENST00000478573 ZNF839A8K0R7 811 aa5.92□□□□□ -1.46
CDC42BPA-212ENST00000478573 AMHP03971 560 aa5.92□□□□□ -1.46
CDC42BPA-212ENST00000478573 CHGBP05060 677 aa5.92□□□□□ -1.46
CDC42BPA-212ENST00000478573 CSF2RBP32927 897 aa5.92□□□□□ -1.46
CDC42BPA-212ENST00000478573 STYK1Q6J9G0 422 aa5.92□□□□□ -1.46
CDC42BPA-212ENST00000478573 WWC2-AS2Q96NR7 200 aa5.92□□□□□ -1.46
CDC42BPA-212ENST00000478573 PTPN22Q9Y2R2 807 aa5.92□□□□□ -1.46
CDC42BPA-212ENST00000478573 MRPL42Q9Y6G3 142 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-212ENST00000478573 ASXL2Q76L83 1435 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 CCDC85CA6NKD9 419 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 ACOT7O00154 380 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 ENPP3O14638 875 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 IL18BPO95998 194 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 ZNF888P0CJ79 500 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 HMGA2P52926 109 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 HABP4Q5JVS0 413 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 CRIP3Q6Q6R5 217 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 MTDHQ86UE4 582 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 Q8N1X5 172 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 JMYQ8N9B5 988 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 Q8TCH9 128 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 AJUBAQ96IF1 538 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 RNPC3Q96LT9 517 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 SORCS2Q96PQ0 1159 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 ZNF747Q9BV97 191 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 RIC8BQ9NVN3 520 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 SLC4A7Q9Y6M7 1214 aa5.91□□□□□ -1.46
CDC42BPA-212ENST00000478573 SUV39H1O43463 412 aa5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 EPHA5P54756 1037 aa5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 RRADP55042 308 aa5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 USP10Q14694 798 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 HS1BP3Q53T59 392 aa5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 EGFLAMQ63HQ2 1017 aa5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 TCTN3Q6NUS6 607 aa5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 EP400NLQ6ZTU2 488 aa5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 USP51Q70EK9 711 aa5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 REXO1L1PQ8IX06 675 aa5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 DNAJC7Q99615 494 aa5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 CDC6Q99741 560 aa5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 SEC61A2Q9H9S3 476 aa5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 ARHGAP28Q9P2N2 729 aa5.9□□□□□ -1.46
CDC42BPA-212ENST00000478573 ESYT3A0FGR9 886 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 FOXS1O43638 330 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 FZD7O75084 574 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 SLPIP03973 132 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 KRT15P19012 456 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 HSD3B2P26439 372 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 R3HDM1Q15032 1099 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 MTERF2Q49AM1 385 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 BTBD8Q5XKL5 378 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 TAX1BP1Q86VP1 789 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 LILRB2Q8N423 598 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 SH3RF2Q8TEC5 729 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 ADOQ96SZ5 270 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms