RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TUBP50607 506 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 CFAP58Q5T655 872 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 TXNRD3Q86VQ6 643 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 ANKS4BQ8N8V4 417 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 STKLD1Q8NE28 680 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 IRGQQ8WZA9 623 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 ESR2Q92731 530 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 MAML3Q96JK9 1138 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 ATP8A2Q9NTI2 1148 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 PSMD14O00487 310 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 NQO1P15559 274 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 GSTT1P30711 240 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 PCK1P35558 622 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 ADD1P35611 737 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 ADKP55263 362 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 USP46P62068 366 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 GPSM2P81274 684 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 APOA5Q6Q788 366 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 RSPH3Q86UC2 560 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 SH2D3CQ8N5H7 860 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 ZIM3Q96PE6 472 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 CCDC28BQ9BUN5 200 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 TIPINQ9BVW5 301 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 MIS12Q9H081 205 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 LY9Q9HBG7 655 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 INTS13Q9NVM9 706 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 RHBDL2Q9NX52 303 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 SCOCQ9UIL1 159 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 SLC12A7Q9Y666 1083 aa13.79□□□□□ -0.2
RTFDC1-207ENST00000477573 MMEP08473 750 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 MYBL1P10243 752 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 FECHP22830 423 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 PRDX5P30044 214 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 CA8P35219 290 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 KRT9P35527 623 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 DYNLL1P63167 89 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 ATP11AP98196 1134 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 PAK2Q13177 524 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 ITIH4Q14624 930 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 RNF220Q5VTB9 566 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 PAPD7Q5XG87 772 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 ADALQ6DHV7 355 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 IQCKQ8N0W5 287 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 CCDC51Q96ER9 411 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 HAPLN3Q96S86 360 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 SAR1BQ9Y6B6 198 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 COMMD3-BMI1R4GMX3 469 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 SOWAHDA6NJG2 315 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 ABL1P00519 1130 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 TFRCP02786 760 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 LDHCP07864 332 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 WTAPQ15007 396 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 ZNF827Q17R98 1081 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 RAD9BQ6WBX8 426 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 COL23A1Q86Y22 540 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 GSPT2Q8IYD1 628 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 MMGT1Q8N4V1 131 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 ZNF384Q8TF68 577 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 FBXW7Q969H0 707 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 NR1H4Q96RI1 486 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 RPS6KC1Q96S38 1066 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 MMS19Q96T76 1030 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 UBAC1Q9BSL1 405 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 MAK16Q9BXY0 300 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 CARD9Q9H257 536 aa13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 TAF1DQ9H5J8 278 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 PPANQ9NQ55 473 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-207ENST00000477573 DUOX1Q9NRD9 1551 aa13.77□□□□□ -0.2
RTFDC1-207ENST00000477573 RCAN1P53805 252 aa13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 ARPC4P59998 168 aa13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 LACTBP83111 547 aaPredicted RBP13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 PLOD1Q02809 727 aaPredicted RBP13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 GSTM4Q03013 218 aa13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 MTF1Q14872 753 aa13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 RCN1Q15293 331 aa13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 SLC44A4Q53GD3 710 aa13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 CFAP157Q5JU67 520 aa13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 PACS1Q6VY07 963 aa13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 MICU3Q86XE3 530 aa13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 MREGQ8N565 214 aa13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 WDR60Q8WVS4 1066 aa13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 UBAP1Q9NZ09 502 aa13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 R3HDM2Q9Y2K5 976 aaKnown RBP13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 STK24Q9Y6E0 443 aa13.77□□□□□ -0.21
RTFDC1-207ENST00000477573 PRPF3O43395 683 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 HIP1RO75146 1068 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 HNRNPCP07910 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 FDPSP14324 419 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 GBP1P32455 592 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 ZNF131P52739 623 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 INAQ16352 499 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 GJC2Q5T442 439 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 KCTD16Q68DU8 428 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 TRIM68Q6AZZ1 485 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 RUFY4Q6ZNE9 571 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 TBC1D1Q86TI0 1168 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 SP8Q8IXZ3 490 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 CCDC197Q8NCU1 140 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 FBF1Q8TES7 1133 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms