RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 A0A087WWV3 80 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 SHTN1A0MZ66 631 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 GOLGA6L9A6NEM1 432 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 VWA5AO00534 786 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 LCE2BO14633 110 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 MSH4O15457 936 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 PSMD10O75832 226 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 FLOT1O75955 427 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 GNA14O95837 355 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 EGFRP00533 1210 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 ATP1A3P13637 1013 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 GAP43P17677 238 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 INPP5BP32019 993 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 NF2P35240 595 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 PRCPP42785 496 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 IREB2P48200 963 aaKnown RBP7.42□□□□□ -1.22
LDB3-206ENST00000477489 TBX2Q13207 712 aaPredicted RBP7.42□□□□□ -1.22
LDB3-206ENST00000477489 MTMR2Q13614 643 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 ISM2Q6H9L7 571 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 CENPPQ6IPU0 288 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 CCDC174Q6PII3 467 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 SYT2Q8N9I0 419 aaPredicted RBP7.42□□□□□ -1.22
LDB3-206ENST00000477489 RETREG2Q8NC44 543 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 PROCA1Q8NCQ7 364 aaPredicted RBP7.42□□□□□ -1.22
LDB3-206ENST00000477489 CLEC4DQ8WXI8 215 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 DCPSQ96C86 337 aaKnown RBP7.42□□□□□ -1.22
LDB3-206ENST00000477489 CDHR1Q96JP9 859 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 MED15Q96RN5 788 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 TSG101Q99816 390 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 MXRA8Q9BRK3 442 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 TIPINQ9BVW5 301 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 TANGO6Q9C0B7 1094 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 KCNF1Q9H3M0 494 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 RPAP3Q9H6T3 665 aaPredicted RBP7.42□□□□□ -1.22
LDB3-206ENST00000477489 TBC1D22BQ9NU19 505 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 VAV3Q9UKW4 847 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 CTNND2Q9UQB3 1225 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 AFG3L2Q9Y4W6 797 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 SSC5DA1L4H1 1573 aa7.42□□□□□ -1.22
LDB3-206ENST00000477489 POLR2AP24928 1970 aaKnown RBP7.41□□□□□ -1.22
LDB3-206ENST00000477489 OTOFQ9HC10 1997 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 SMCHD1A6NHR9 2005 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 LOC102724159A0A0B4J2E5 919 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 IQCA1LA6NCM1 817 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 MYMKA6NI61 221 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 KCNJ18B7U540 433 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 CXCL11O14625 94 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 ARHGAP6O43182 974 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 STX10O60499 249 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 DKC1O60832 514 aaKnown RBP eCLIP7.41□□□□□ -1.22
LDB3-206ENST00000477489 LYPLA2O95372 231 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 EYA4O95677 639 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 PLA2G4BP0C869 781 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 SKILP12757 684 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 SFNP31947 248 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 PBX1P40424 430 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 VEGFBP49765 207 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 DNM2P50570 870 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 PPATQ06203 517 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 SPP2Q13103 211 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 KCNJ12Q14500 433 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 PWP2Q15269 919 aaKnown RBP7.41□□□□□ -1.22
LDB3-206ENST00000477489 EPHA7Q15375 998 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 CCDC144BQ3MJ40 725 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 TCP11X2Q5H9J9 407 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 FIGNQ5HY92 759 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 LRCH2Q5VUJ6 765 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 SPRYD7Q5W111 196 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 KLHL10Q6JEL2 608 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 TTI2Q6NXR4 508 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 B3GNT9Q6UX72 402 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 LBX2Q6XYB7 198 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 LIAT1Q6ZQX7 453 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 CATSPERGQ6ZRH7 1159 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.41□□□□□ -1.22
LDB3-206ENST00000477489 OTOP1Q7RTM1 612 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 APTXQ7Z2E3 356 aaKnown RBP7.41□□□□□ -1.22
LDB3-206ENST00000477489 TMC6Q7Z403 805 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 FILIP1Q7Z7B0 1213 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 CNGA4Q8IV77 575 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 SLC17A8Q8NDX2 589 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 CHST13Q8NET6 341 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 REPS2Q8NFH8 660 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 TRPM4Q8TD43 1214 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 GTF3C2Q8WUA4 911 aaPredicted RBP7.41□□□□□ -1.22
LDB3-206ENST00000477489 CACTINQ8WUQ7 758 aaKnown RBP7.41□□□□□ -1.22
LDB3-206ENST00000477489 GPRASP2Q96D09 838 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 THAP11Q96EK4 314 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 TRIM47Q96LD4 638 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 PRIMPOLQ96LW4 560 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 CEP63Q96MT8 703 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 PANX2Q96RD6 677 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 NACC1Q96RE7 527 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 HSD17B14Q9BPX1 270 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 NUP58Q9BVL2 599 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 TEKT3Q9BXF9 490 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 TEX13BQ9BXU2 312 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 GLIS2Q9BZE0 524 aaPredicted RBP7.41□□□□□ -1.22
LDB3-206ENST00000477489 TMX1Q9H3N1 280 aa7.41□□□□□ -1.22
LDB3-206ENST00000477489 JADE2Q9NQC1 790 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms