RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 ITIH4Q14624 930 aa19.39■□□□□ 0.69
CCM2-207ENST00000475551 LETM2Q2VYF4 491 aa19.39■□□□□ 0.69
CCM2-207ENST00000475551 ANKS4BQ8N8V4 417 aa19.39■□□□□ 0.69
CCM2-207ENST00000475551 PNMA1Q8ND90 353 aa19.39■□□□□ 0.69
CCM2-207ENST00000475551 ZNF384Q8TF68 577 aa19.39■□□□□ 0.69
CCM2-207ENST00000475551 DCP1AQ9NPI6 582 aaPredicted RBP19.39■□□□□ 0.69
CCM2-207ENST00000475551 BATF3Q9NR55 127 aa19.39■□□□□ 0.69
CCM2-207ENST00000475551 MAD2L2Q9UI95 211 aa19.39■□□□□ 0.69
CCM2-207ENST00000475551 SLC12A4Q9UP95 1085 aa19.39■□□□□ 0.69
CCM2-207ENST00000475551 ASAP2O43150 1006 aa19.39■□□□□ 0.69
CCM2-207ENST00000475551 FKBP3Q00688 224 aaKnown RBP19.39■□□□□ 0.69
CCM2-207ENST00000475551 PPP2R5AQ15172 486 aa19.39■□□□□ 0.69
CCM2-207ENST00000475551 NONOQ15233 471 aaKnown RBP eCLIP19.39■□□□□ 0.69
CCM2-207ENST00000475551 PPP1R7Q15435 360 aa19.39■□□□□ 0.69
CCM2-207ENST00000475551 SBK1Q52WX2 424 aa19.39■□□□□ 0.69
CCM2-207ENST00000475551 LARP4BQ92615 738 aaKnown RBP19.39■□□□□ 0.69
CCM2-207ENST00000475551 ZNF317Q96PQ6 595 aaPredicted RBP19.39■□□□□ 0.69
CCM2-207ENST00000475551 COL1A1P02452 1464 aaPredicted RBP19.38■□□□□ 0.69
CCM2-207ENST00000475551 DAPK3O43293 454 aa19.38■□□□□ 0.69
CCM2-207ENST00000475551 ORC2Q13416 577 aaPredicted RBP19.38■□□□□ 0.69
CCM2-207ENST00000475551 SLC35G1Q2M3R5 365 aa19.38■□□□□ 0.69
CCM2-207ENST00000475551 CCDC152Q4G0S7 254 aa19.38■□□□□ 0.69
CCM2-207ENST00000475551 ZCWPW2Q504Y3 356 aa19.38■□□□□ 0.69
CCM2-207ENST00000475551 DZIP3Q86Y13 1208 aaKnown RBP19.38■□□□□ 0.69
CCM2-207ENST00000475551 LRRC57Q8N9N7 239 aa19.38■□□□□ 0.69
CCM2-207ENST00000475551 CCDC26Q8TAB7 109 aa19.38■□□□□ 0.69
CCM2-207ENST00000475551 CCHCR1Q8TD31 782 aa19.38■□□□□ 0.69
CCM2-207ENST00000475551 AP1M1Q9BXS5 423 aa19.38■□□□□ 0.69
CCM2-207ENST00000475551 ZMYND12Q9H0C1 365 aa19.38■□□□□ 0.69
CCM2-207ENST00000475551 FAM114A2Q9NRY5 505 aa19.38■□□□□ 0.69
CCM2-207ENST00000475551 BAIAP2L1Q9UHR4 511 aa19.38■□□□□ 0.69
CCM2-207ENST00000475551 ZBTB1Q9Y2K1 713 aa19.38■□□□□ 0.69
CCM2-207ENST00000475551 NOC2LQ9Y3T9 749 aaKnown RBP19.38■□□□□ 0.69
CCM2-207ENST00000475551 KIF3CO14782 793 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 RAPGEF1Q13905 1077 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 ASIC2Q16515 512 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 RASGEF1CQ8N431 466 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 CCDC63Q8NA47 563 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 DDX47Q9H0S4 455 aaKnown RBP19.37■□□□□ 0.69
CCM2-207ENST00000475551 ATP8A2Q9NTI2 1148 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 ARPP21Q9UBL0 812 aaPredicted RBP19.37■□□□□ 0.69
CCM2-207ENST00000475551 CFAP73A6NFT4 308 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 CYTH3O43739 400 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 RPSAP08865 295 aaKnown RBP19.37■□□□□ 0.69
CCM2-207ENST00000475551 NT5C2P49902 561 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 DHX9Q08211 1270 aaKnown RBP19.37■□□□□ 0.69
CCM2-207ENST00000475551 ITPK1Q13572 414 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 NAA25Q14CX7 972 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 DYMQ7RTS9 669 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 NEK8Q86SG6 692 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 PNMA5Q96PV4 448 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 LAMB1P07942 1786 aa19.37■□□□□ 0.69
CCM2-207ENST00000475551 KRIT1O00522 736 aa19.36■□□□□ 0.69
CCM2-207ENST00000475551 PPP1R12BO60237 982 aaPredicted RBP19.36■□□□□ 0.69
CCM2-207ENST00000475551 CTNND1O60716 968 aaKnown RBP19.36■□□□□ 0.69
CCM2-207ENST00000475551 ACCSLQ4AC99 568 aa19.36■□□□□ 0.69
CCM2-207ENST00000475551 SUSD4Q5VX71 490 aa19.36■□□□□ 0.69
CCM2-207ENST00000475551 PIGWQ7Z7B1 504 aa19.36■□□□□ 0.69
CCM2-207ENST00000475551 METTL13Q8N6R0 699 aa19.36■□□□□ 0.69
CCM2-207ENST00000475551 FAM133AQ8N9E0 248 aa19.36■□□□□ 0.69
CCM2-207ENST00000475551 CRNKL1Q9BZJ0 848 aaKnown RBP19.36■□□□□ 0.69
CCM2-207ENST00000475551 LRRC27Q9C0I9 530 aa19.36■□□□□ 0.69
CCM2-207ENST00000475551 BUB1BO60566 1050 aaPredicted RBP19.36■□□□□ 0.69
CCM2-207ENST00000475551 PPFIA2O75334 1257 aa19.36■□□□□ 0.69
CCM2-207ENST00000475551 GYG1P46976 350 aa19.36■□□□□ 0.69
CCM2-207ENST00000475551 IRX1P78414 480 aaPredicted RBP19.36■□□□□ 0.69
CCM2-207ENST00000475551 HOOK3Q86VS8 718 aa19.36■□□□□ 0.69
CCM2-207ENST00000475551 CEP63Q96MT8 703 aa19.36■□□□□ 0.69
CCM2-207ENST00000475551 TXLNGYQ9BZA5 131 aa19.36■□□□□ 0.69
CCM2-207ENST00000475551 AMACRQ9UHK6 382 aa19.36■□□□□ 0.69
CCM2-207ENST00000475551 GNA14O95837 355 aa19.35■□□□□ 0.69
CCM2-207ENST00000475551 CYP2D6P10635 497 aa19.35■□□□□ 0.69
CCM2-207ENST00000475551 CALRP27797 417 aaKnown RBP19.35■□□□□ 0.69
CCM2-207ENST00000475551 MARSP56192 900 aaKnown RBP19.35■□□□□ 0.69
CCM2-207ENST00000475551 MYOCDQ8IZQ8 938 aa19.35■□□□□ 0.69
CCM2-207ENST00000475551 MDM1Q8TC05 714 aa19.35■□□□□ 0.69
CCM2-207ENST00000475551 TBC1D31Q96DN5 1066 aa19.35■□□□□ 0.69
CCM2-207ENST00000475551 IL17RBQ9NRM6 502 aa19.35■□□□□ 0.69
CCM2-207ENST00000475551 MYH7BA7E2Y1 1941 aa19.35■□□□□ 0.69
CCM2-207ENST00000475551 APBA3O96018 575 aa19.35■□□□□ 0.69
CCM2-207ENST00000475551 ARID5AQ03989 594 aa19.35■□□□□ 0.69
CCM2-207ENST00000475551 SLMAPQ14BN4 828 aa19.35■□□□□ 0.69
CCM2-207ENST00000475551 ZKSCAN8Q15776 578 aaPredicted RBP19.35■□□□□ 0.69
CCM2-207ENST00000475551 GANQ9H2C0 597 aa19.35■□□□□ 0.69
CCM2-207ENST00000475551 UTP11Q9Y3A2 253 aaKnown RBP19.35■□□□□ 0.69
CCM2-207ENST00000475551 ATP8B3O60423 1300 aa19.35■□□□□ 0.69
CCM2-207ENST00000475551 TRAF5O00463 557 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 ECM2O94769 699 aaPredicted RBP19.34■□□□□ 0.69
CCM2-207ENST00000475551 TRIM59Q8IWR1 403 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 PROCA1Q8NCQ7 364 aaPredicted RBP19.34■□□□□ 0.69
CCM2-207ENST00000475551 RAD54LQ92698 747 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 STAMBPL1Q96FJ0 436 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 FRMD3A2A2Y4 597 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 IL6STP40189 918 aaPredicted RBP19.34■□□□□ 0.69
CCM2-207ENST00000475551 FXR2P51116 673 aaKnown RBP eCLIP19.34■□□□□ 0.69
CCM2-207ENST00000475551 TFAP4Q01664 338 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 LRRC41Q15345 812 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 CEP120Q8N960 986 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 GLIS3Q8NEA6 775 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 NSMCE1Q8WV22 266 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms