RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 TMEM260Q9NX78 707 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 MSRAQ9UJ68 235 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 ZDHHC9Q9Y397 364 aa17.74■□□□□ 0.43
CPSF3-203ENST00000475482 NFASCO94856 1347 aa17.73■□□□□ 0.43
CPSF3-203ENST00000475482 ADAMTS3O15072 1205 aa17.73■□□□□ 0.43
CPSF3-203ENST00000475482 TREHO43280 583 aa17.73■□□□□ 0.43
CPSF3-203ENST00000475482 CYP3A4P08684 503 aa17.73■□□□□ 0.43
CPSF3-203ENST00000475482 FDPSP14324 419 aaKnown RBP17.73■□□□□ 0.43
CPSF3-203ENST00000475482 ATP2A2P16615 1042 aaKnown RBP17.73■□□□□ 0.43
CPSF3-203ENST00000475482 TCF7P36402 384 aaPredicted RBP17.73■□□□□ 0.43
CPSF3-203ENST00000475482 CEP55Q53EZ4 464 aa17.73■□□□□ 0.43
CPSF3-203ENST00000475482 NIPA1Q7RTP0 329 aa17.73■□□□□ 0.43
CPSF3-203ENST00000475482 ATP6V0A1Q93050 837 aa17.73■□□□□ 0.43
CPSF3-203ENST00000475482 PHKBQ93100 1093 aa17.73■□□□□ 0.43
CPSF3-203ENST00000475482 PGBD1Q96JS3 809 aa17.73■□□□□ 0.43
CPSF3-203ENST00000475482 ZNF215Q9UL58 517 aaPredicted RBP17.73■□□□□ 0.43
CPSF3-203ENST00000475482 PCDHA11Q9Y5I1 949 aa17.73■□□□□ 0.43
CPSF3-203ENST00000475482 PRUNE2Q8WUY3 3088 aa17.73■□□□□ 0.43
CPSF3-203ENST00000475482 ZBBXA8MT70 800 aa17.72■□□□□ 0.43
CPSF3-203ENST00000475482 LGR5O75473 907 aa17.72■□□□□ 0.43
CPSF3-203ENST00000475482 ARP10275 920 aa17.72■□□□□ 0.43
CPSF3-203ENST00000475482 NFKBIBQ15653 356 aa17.72■□□□□ 0.43
CPSF3-203ENST00000475482 UTP14CQ5TAP6 766 aaKnown RBP17.72■□□□□ 0.43
CPSF3-203ENST00000475482 MCTP2Q6DN12 878 aa17.72■□□□□ 0.43
CPSF3-203ENST00000475482 SLC9A7Q96T83 725 aa17.72■□□□□ 0.43
CPSF3-203ENST00000475482 FTOQ9C0B1 505 aaKnown RBP eCLIP17.72■□□□□ 0.43
CPSF3-203ENST00000475482 UNC80Q8N2C7 3258 aa17.72■□□□□ 0.43
CPSF3-203ENST00000475482 EMSYQ7Z589 1322 aa17.72■□□□□ 0.43
CPSF3-203ENST00000475482 NRCAMQ92823 1304 aa17.72■□□□□ 0.43
CPSF3-203ENST00000475482 MICAL3Q7RTP6 2002 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 CAND2O75155 1236 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 BAG4O95429 457 aaKnown RBP17.71■□□□□ 0.43
CPSF3-203ENST00000475482 GNAT1P11488 350 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 RABGGTBP53611 331 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 ARHGAP4P98171 946 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 SP4Q02446 784 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 MKRN4PQ13434 485 aaPredicted RBP17.71■□□□□ 0.43
CPSF3-203ENST00000475482 SAFBQ15424 915 aaKnown RBP eCLIP17.71■□□□□ 0.43
CPSF3-203ENST00000475482 TCTN1Q2MV58 587 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 FOXD4L5Q5VV16 416 aaPredicted RBP17.71■□□□□ 0.43
CPSF3-203ENST00000475482 CNKSR3Q6P9H4 555 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 RPAINQ86UA6 219 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 FAM177A1Q8N128 213 aaPredicted RBP17.71■□□□□ 0.43
CPSF3-203ENST00000475482 SLC17A8Q8NDX2 589 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 FBXO18Q8NFZ0 1043 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 CCDC12Q8WUD4 166 aaPredicted RBP17.71■□□□□ 0.43
CPSF3-203ENST00000475482 FOXD4L4Q8WXT5 416 aaPredicted RBP17.71■□□□□ 0.43
CPSF3-203ENST00000475482 PCYT2Q99447 389 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 NKX2-4Q9H2Z4 354 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 AGO4Q9HCK5 861 aaKnown RBP17.71■□□□□ 0.43
CPSF3-203ENST00000475482 C6orf50Q9HD87 102 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 JPH1Q9HDC5 661 aaPredicted RBP17.71■□□□□ 0.43
CPSF3-203ENST00000475482 SETD4Q9NVD3 440 aa17.71■□□□□ 0.43
CPSF3-203ENST00000475482 IGLV3-22A0A075B6J6 115 aa17.7■□□□□ 0.42
CPSF3-203ENST00000475482 ATG7O95352 703 aa17.7■□□□□ 0.42
CPSF3-203ENST00000475482 GNA11P29992 359 aa17.7■□□□□ 0.42
CPSF3-203ENST00000475482 MCM4P33991 863 aa17.7■□□□□ 0.42
CPSF3-203ENST00000475482 ITGB3BPQ13352 177 aaPredicted RBP17.7■□□□□ 0.42
CPSF3-203ENST00000475482 CSPP1Q1MSJ5 1256 aa17.7■□□□□ 0.42
CPSF3-203ENST00000475482 JAKMIP3Q5VZ66 844 aa17.7■□□□□ 0.42
CPSF3-203ENST00000475482 LMBR1Q8WVP7 490 aa17.7■□□□□ 0.42
CPSF3-203ENST00000475482 SMARCAD1Q9H4L7 1026 aa17.7■□□□□ 0.42
CPSF3-203ENST00000475482 SH3GLB2Q9NR46 395 aa17.7■□□□□ 0.42
CPSF3-203ENST00000475482 ERAP1Q9NZ08 941 aa17.7■□□□□ 0.42
CPSF3-203ENST00000475482 SLC9A2Q9UBY0 812 aa17.7■□□□□ 0.42
CPSF3-203ENST00000475482 ABHD14A-ACY1A0A1B0GW23 586 aa17.69■□□□□ 0.42
CPSF3-203ENST00000475482 MBLAC1A4D2B0 266 aaPredicted RBP17.69■□□□□ 0.42
CPSF3-203ENST00000475482 RSPH10B2B2RC85 870 aa17.69■□□□□ 0.42
CPSF3-203ENST00000475482 FAM86B1E9PN63 330 aa17.69■□□□□ 0.42
CPSF3-203ENST00000475482 FAM86B2P0C5J1 330 aa17.69■□□□□ 0.42
CPSF3-203ENST00000475482 RSPH10BP0C881 870 aa17.69■□□□□ 0.42
CPSF3-203ENST00000475482 MYOGP15173 224 aa17.69■□□□□ 0.42
CPSF3-203ENST00000475482 FOSL2P15408 326 aa17.69■□□□□ 0.42
CPSF3-203ENST00000475482 THPOP40225 353 aa17.69■□□□□ 0.42
CPSF3-203ENST00000475482 WDR5P61964 334 aaKnown RBP17.69■□□□□ 0.42
CPSF3-203ENST00000475482 FAM26DQ5JW98 314 aa17.69■□□□□ 0.42
CPSF3-203ENST00000475482 MCTP1Q6DN14 999 aa17.69■□□□□ 0.42
CPSF3-203ENST00000475482 HERC6Q8IVU3 1022 aa17.69■□□□□ 0.42
CPSF3-203ENST00000475482 REXO1Q8N1G1 1221 aaKnown RBP17.69■□□□□ 0.42
CPSF3-203ENST00000475482 MAFAQ8NHW3 353 aaPredicted RBP17.69■□□□□ 0.42
CPSF3-203ENST00000475482 SLC28A3Q9HAS3 691 aa17.69■□□□□ 0.42
CPSF3-203ENST00000475482 PKD2L1Q9P0L9 805 aa17.69■□□□□ 0.42
CPSF3-203ENST00000475482 WDR81Q562E7 1941 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 CUL9Q8IWT3 2517 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 IGKV6D-21A0A0A0MT36 114 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 DHX15O43143 795 aaKnown RBP17.68■□□□□ 0.42
CPSF3-203ENST00000475482 EDIL3O43854 480 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 EFCAB14O75071 495 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 PPFIA3O75145 1194 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 CIITAP33076 1130 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 ACTR2P61160 394 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 GNL2Q13823 731 aaKnown RBP17.68■□□□□ 0.42
CPSF3-203ENST00000475482 PLEKHG4Q58EX7 1191 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 ATL3Q6DD88 541 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 BRAPQ7Z569 592 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 SDF4Q9BRK5 362 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 BRMS1Q9HCU9 246 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 TRANK1O15050 2925 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 SIP14410 1827 aa17.68■□□□□ 0.42
CPSF3-203ENST00000475482 DTNBO60941 627 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms