RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 NELFBQ8WX92 580 aa15.29■□□□□ 0.04
TRAF4-210ENST00000475329 CCDC102AQ96A19 550 aa15.29■□□□□ 0.04
TRAF4-210ENST00000475329 BHMT2Q9H2M3 363 aa15.29■□□□□ 0.04
TRAF4-210ENST00000475329 ZSWIM4Q9H7M6 989 aa15.29■□□□□ 0.04
TRAF4-210ENST00000475329 JPH1Q9HDC5 661 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-210ENST00000475329 PANK4Q9NVE7 773 aa15.29■□□□□ 0.04
TRAF4-210ENST00000475329 SLC9A2Q9UBY0 812 aa15.29■□□□□ 0.04
TRAF4-210ENST00000475329 RWDD2AQ9UIY3 292 aa15.29■□□□□ 0.04
TRAF4-210ENST00000475329 ABT1Q9ULW3 272 aaKnown RBP15.29■□□□□ 0.04
TRAF4-210ENST00000475329 NFE2L3Q9Y4A8 694 aa15.29■□□□□ 0.04
TRAF4-210ENST00000475329 ASB14A6NK59 587 aa15.28■□□□□ 0.04
TRAF4-210ENST00000475329 IGF2BP3O00425 579 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRAF4-210ENST00000475329 STRNO43815 780 aa15.28■□□□□ 0.04
TRAF4-210ENST00000475329 LYPLA2O95372 231 aa15.28■□□□□ 0.04
TRAF4-210ENST00000475329 MAPK4P31152 587 aa15.28■□□□□ 0.04
TRAF4-210ENST00000475329 INHBEP58166 350 aa15.28■□□□□ 0.04
TRAF4-210ENST00000475329 EHHADHQ08426 723 aa15.28■□□□□ 0.04
TRAF4-210ENST00000475329 TAF1CQ15572 869 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-210ENST00000475329 MORC4Q8TE76 937 aa15.28■□□□□ 0.04
TRAF4-210ENST00000475329 PIGOQ8TEQ8 1089 aa15.28■□□□□ 0.04
TRAF4-210ENST00000475329 DHTKD1Q96HY7 919 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-210ENST00000475329 FANCLQ9NW38 375 aa15.28■□□□□ 0.04
TRAF4-210ENST00000475329 WRAP73Q9P2S5 460 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-210ENST00000475329 NPHP3-ACAD11A0A0J9YXS1 232 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 FRMD3A2A2Y4 597 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 ARHGEF35A5YM69 484 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 TMEM88BA6NKF7 163 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 FAM155AB1AL88 458 aaPredicted RBP15.27■□□□□ 0.04
TRAF4-210ENST00000475329 DKC1O60832 514 aaKnown RBP eCLIP15.27■□□□□ 0.04
TRAF4-210ENST00000475329 TBCAO75347 108 aaKnown RBP15.27■□□□□ 0.04
TRAF4-210ENST00000475329 PSAPP07602 524 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 ADORA2AP29274 412 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 STX17P56962 302 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 PSMC5P62195 406 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 SREBF2Q12772 1141 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 STK4Q13043 487 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 TPD52L1Q16890 204 aaPredicted RBP15.27■□□□□ 0.04
TRAF4-210ENST00000475329 ARSHQ5FYA8 562 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 FAM26FQ5R3K3 315 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 KCNV1Q6PIU1 500 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.27■□□□□ 0.04
TRAF4-210ENST00000475329 KIAA0895Q8NCT3 520 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 HHIPL1Q96JK4 782 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 MED15Q96RN5 788 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 REEP2Q9BRK0 252 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 RUSC1Q9BVN2 902 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 HSD3B7Q9H2F3 369 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 KCND2Q9NZV8 630 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 DBR1Q9UK59 544 aaKnown RBP15.27■□□□□ 0.04
TRAF4-210ENST00000475329 MAPK8IP1Q9UQF2 711 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 PCDHA10Q9Y5I2 948 aa15.27■□□□□ 0.04
TRAF4-210ENST00000475329 BICDL2A1A5D9 508 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 TGFB3P10600 412 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 UBA1P22314 1058 aaKnown RBP15.26■□□□□ 0.03
TRAF4-210ENST00000475329 CDC25BP30305 580 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 ACTR2P61160 394 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 GIT2Q14161 759 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 NEDD9Q14511 834 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 UGCGQ16739 394 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 ZNF792Q3KQV3 632 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 RINT1Q6NUQ1 792 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 MIS18BP1Q6P0N0 1132 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 GPR142Q7Z601 462 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 PLEKHH3Q7Z736 793 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 ZNF467Q7Z7K2 595 aaPredicted RBP15.26■□□□□ 0.03
TRAF4-210ENST00000475329 IFNL1Q8IU54 200 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 C4orf19Q8IY42 314 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 ATP6V0A1Q93050 837 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 MRFAP1L1Q96HT8 127 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 CCDC43Q96MW1 224 aaKnown RBP15.26■□□□□ 0.03
TRAF4-210ENST00000475329 SLC39A2Q9NP94 309 aa15.26■□□□□ 0.03
TRAF4-210ENST00000475329 PTMAP06454 111 aaKnown RBP15.25■□□□□ 0.03
TRAF4-210ENST00000475329 ATP1A3P13637 1013 aa15.25■□□□□ 0.03
TRAF4-210ENST00000475329 ZNF18P17022 549 aa15.25■□□□□ 0.03
TRAF4-210ENST00000475329 GAP43P17677 238 aa15.25■□□□□ 0.03
TRAF4-210ENST00000475329 FANCCQ00597 558 aa15.25■□□□□ 0.03
TRAF4-210ENST00000475329 SP2Q02086 613 aa15.25■□□□□ 0.03
TRAF4-210ENST00000475329 CACNB1Q02641 598 aaPredicted RBP15.25■□□□□ 0.03
TRAF4-210ENST00000475329 RAD51AP2Q09MP3 1159 aa15.25■□□□□ 0.03
TRAF4-210ENST00000475329 GRB14Q14449 540 aa15.25■□□□□ 0.03
TRAF4-210ENST00000475329 HERC4Q5GLZ8 1057 aaPredicted RBP15.25■□□□□ 0.03
TRAF4-210ENST00000475329 GUF1Q8N442 669 aaKnown RBP15.25■□□□□ 0.03
TRAF4-210ENST00000475329 P2RX5Q93086 422 aa15.25■□□□□ 0.03
TRAF4-210ENST00000475329 HPS3Q969F9 1004 aa15.25■□□□□ 0.03
TRAF4-210ENST00000475329 TRIM44Q96DX7 344 aaPredicted RBP15.25■□□□□ 0.03
TRAF4-210ENST00000475329 ZHX3Q9H4I2 956 aa15.25■□□□□ 0.03
TRAF4-210ENST00000475329 CPA4Q9UI42 421 aa15.25■□□□□ 0.03
TRAF4-210ENST00000475329 DOCK3Q8IZD9 2030 aa15.25■□□□□ 0.03
TRAF4-210ENST00000475329 SLC15A5A6NIM6 579 aa15.24■□□□□ 0.03
TRAF4-210ENST00000475329 ZBTB39O15060 712 aa15.24■□□□□ 0.03
TRAF4-210ENST00000475329 CBFA2T2O43439 604 aa15.24■□□□□ 0.03
TRAF4-210ENST00000475329 COBLO75128 1261 aa15.24■□□□□ 0.03
TRAF4-210ENST00000475329 FAM13AO94988 1023 aa15.24■□□□□ 0.03
TRAF4-210ENST00000475329 SERPINC1P01008 464 aa15.24■□□□□ 0.03
TRAF4-210ENST00000475329 SUPT20HL2P0C7V6 817 aa15.24■□□□□ 0.03
TRAF4-210ENST00000475329 CCNE1P24864 410 aa15.24■□□□□ 0.03
TRAF4-210ENST00000475329 YWHABP31946 246 aaKnown RBP15.24■□□□□ 0.03
TRAF4-210ENST00000475329 SP4Q02446 784 aa15.24■□□□□ 0.03
TRAF4-210ENST00000475329 CDKAL1Q5VV42 579 aa15.24■□□□□ 0.03
TRAF4-210ENST00000475329 ABHD15Q6UXT9 468 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms