RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 SWSAP1Q6NVH7 229 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 MIS18BP1Q6P0N0 1132 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 TMEM199Q8N511 208 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 AFAP1L1Q8TED9 768 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 UNC45AQ9H3U1 944 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 KCNMB3Q9NPA1 279 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 TCEAL9Q9UHQ7 104 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 SMC3Q9UQE7 1217 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 PCDHA10Q9Y5I2 948 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 NRCAMQ92823 1304 aa18.33■□□□□ 0.53
SRM-204ENST00000475189 KIF28PB7ZC32 967 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 PITPNM1O00562 1244 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 BACH1O14867 736 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 TREHO43280 583 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 CSF2RAP15509 400 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 BFSP2Q13515 415 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 PLCB4Q15147 1175 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 TRIM71Q2Q1W2 868 aaKnown RBP18.33■□□□□ 0.52
SRM-204ENST00000475189 FAM160B1Q5W0V3 765 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 B3GNT9Q6UX72 402 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 SERINC5Q86VE9 423 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 POTEDQ86YR6 584 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 LMBR1Q8WVP7 490 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 HAS1Q92839 578 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 ATP6V0A1Q93050 837 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 WNT8BQ93098 351 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 SCLYQ96I15 445 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 FAM20AQ96MK3 541 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 ZNF302Q9NR11 478 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 DISC1Q9NRI5 854 aa18.33■□□□□ 0.52
SRM-204ENST00000475189 WDR64B1ANS9 1081 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 TBX3O15119 743 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 CHMP2AO43633 222 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 PSAPP07602 524 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 GNAT1P11488 350 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 ATP4AP20648 1035 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 U2AF2P26368 475 aaKnown RBP eCLIP18.32■□□□□ 0.52
SRM-204ENST00000475189 SLC26A2P50443 739 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 RBL2Q08999 1139 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 PPFIA1Q13136 1202 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 PPIGQ13427 754 aaKnown RBP eCLIP18.32■□□□□ 0.52
SRM-204ENST00000475189 C16orf59Q7L2K0 433 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 NOSTRINQ8IVI9 506 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 TDHQ8IZJ6 230 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 CCDC155Q8N6L0 562 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 RETREG2Q8NC44 543 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 CAGE1Q8TC20 777 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 MAFBQ9Y5Q3 323 aaPredicted RBP18.32■□□□□ 0.52
SRM-204ENST00000475189 TET1Q8NFU7 2136 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 EVPLQ92817 2033 aa18.32■□□□□ 0.52
SRM-204ENST00000475189 INSRRP14616 1297 aa18.31■□□□□ 0.52
SRM-204ENST00000475189 SFNP31947 248 aa18.31■□□□□ 0.52
SRM-204ENST00000475189 JAK3P52333 1124 aa18.31■□□□□ 0.52
SRM-204ENST00000475189 GNL2Q13823 731 aaKnown RBP18.31■□□□□ 0.52
SRM-204ENST00000475189 GRIK4Q16099 956 aa18.31■□□□□ 0.52
SRM-204ENST00000475189 C9orf50Q5SZB4 431 aa18.31■□□□□ 0.52
SRM-204ENST00000475189 PDXDC2PQ6P474 469 aa18.31■□□□□ 0.52
SRM-204ENST00000475189 SNX21Q969T3 373 aa18.31■□□□□ 0.52
SRM-204ENST00000475189 GABBR1Q9UBS5 961 aa18.31■□□□□ 0.52
SRM-204ENST00000475189 SAMM50Q9Y512 469 aa18.31■□□□□ 0.52
SRM-204ENST00000475189 POTEB3A0JP26 581 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 K7ELQ4 463 aaPredicted RBP18.3■□□□□ 0.52
SRM-204ENST00000475189 IQCF3P0C7M6 154 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 ACRP10323 421 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 CKBP12277 381 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 ATP2B1P20020 1258 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 SHHQ15465 462 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 MARCH8Q5T0T0 291 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 POTEBQ6S5H4 581 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 MIER3Q7Z3K6 550 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 RDM1Q8NG50 284 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 ATP8B4Q8TF62 1192 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 VWCEQ96DN2 955 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 IL23AQ9NPF7 189 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 VAV3Q9UKW4 847 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 TRPC6Q9Y210 931 aa18.3■□□□□ 0.52
SRM-204ENST00000475189 IGSF9BQ9UPX0 1349 aa18.29■□□□□ 0.52
SRM-204ENST00000475189 MBLAC1A4D2B0 266 aaPredicted RBP18.29■□□□□ 0.52
SRM-204ENST00000475189 RRN3P2A6NIE6 340 aa18.29■□□□□ 0.52
SRM-204ENST00000475189 MARCH6O60337 910 aa18.29■□□□□ 0.52
SRM-204ENST00000475189 HBP1O60381 514 aa18.29■□□□□ 0.52
SRM-204ENST00000475189 BAG4O95429 457 aaKnown RBP18.29■□□□□ 0.52
SRM-204ENST00000475189 SELPP16109 830 aa18.29■□□□□ 0.52
SRM-204ENST00000475189 IGBP1P78318 339 aa18.29■□□□□ 0.52
SRM-204ENST00000475189 PPP2R5CQ13362 524 aa18.29■□□□□ 0.52
SRM-204ENST00000475189 TMEM240Q5SV17 173 aa18.29■□□□□ 0.52
SRM-204ENST00000475189 SLFN12Q8IYM2 578 aa18.29■□□□□ 0.52
SRM-204ENST00000475189 TNPO1Q92973 898 aaKnown RBP18.29■□□□□ 0.52
SRM-204ENST00000475189 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.29■□□□□ 0.521e-7■■□□□ 11.9
SRM-204ENST00000475189 H3BQV1 296 aa18.28■□□□□ 0.52
SRM-204ENST00000475189 EML1O00423 815 aa18.28■□□□□ 0.52
SRM-204ENST00000475189 ZNF862O60290 1169 aa18.28■□□□□ 0.52
SRM-204ENST00000475189 NEMFO60524 1076 aa18.28■□□□□ 0.52
SRM-204ENST00000475189 FXR1P51114 621 aaKnown RBP eCLIP18.28■□□□□ 0.52
SRM-204ENST00000475189 CALCRLQ16602 461 aa18.28■□□□□ 0.52
SRM-204ENST00000475189 UGCGQ16739 394 aa18.28■□□□□ 0.52
SRM-204ENST00000475189 ZNF618Q5T7W0 954 aa18.28■□□□□ 0.52
SRM-204ENST00000475189 LARP1BQ659C4 914 aaKnown RBP18.28■□□□□ 0.52
SRM-204ENST00000475189 TRAF7Q6Q0C0 670 aa18.28■□□□□ 0.52
SRM-204ENST00000475189 RUFY4Q6ZNE9 571 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms