RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 SMIM10L2AP0DMW4 78 aa23.41■■□□□ 1.34
TOP3A-204ENST00000472959 SMIM10L2BP0DMW5 78 aa23.41■■□□□ 1.34
TOP3A-204ENST00000472959 GNAT1P11488 350 aa23.41■■□□□ 1.34
TOP3A-204ENST00000472959 PDXDC2PQ6P474 469 aa23.41■■□□□ 1.34
TOP3A-204ENST00000472959 FERMT3Q86UX7 667 aa23.41■■□□□ 1.34
TOP3A-204ENST00000472959 ZSCAN16Q9H4T2 348 aaPredicted RBP23.41■■□□□ 1.34
TOP3A-204ENST00000472959 TTC12Q9H892 705 aaPredicted RBP23.41■■□□□ 1.34
TOP3A-204ENST00000472959 PDLIM7Q9NR12 457 aa23.41■■□□□ 1.34
TOP3A-204ENST00000472959 TRMT13Q9NUP7 481 aaKnown RBP23.41■■□□□ 1.34
TOP3A-204ENST00000472959 PCDHB6Q9Y5E3 794 aa23.41■■□□□ 1.34
TOP3A-204ENST00000472959 KIAA0355O15063 1070 aa23.4■■□□□ 1.34
TOP3A-204ENST00000472959 MARK3P27448 753 aa23.4■■□□□ 1.34
TOP3A-204ENST00000472959 HOXC8P31273 242 aa23.4■■□□□ 1.34
TOP3A-204ENST00000472959 TXKP42681 527 aa23.4■■□□□ 1.34
TOP3A-204ENST00000472959 NBR1Q14596 966 aa23.4■■□□□ 1.34
TOP3A-204ENST00000472959 PTGISQ16647 500 aa23.4■■□□□ 1.34
TOP3A-204ENST00000472959 GDF6Q6KF10 455 aaPredicted RBP23.4■■□□□ 1.34
TOP3A-204ENST00000472959 PPP1R13LQ8WUF5 828 aa23.4■■□□□ 1.34
TOP3A-204ENST00000472959 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.4■■□□□ 1.34
TOP3A-204ENST00000472959 GABBR1Q9UBS5 961 aa23.4■■□□□ 1.34
TOP3A-204ENST00000472959 TBX21Q9UL17 535 aa23.4■■□□□ 1.34
TOP3A-204ENST00000472959 NOD1Q9Y239 953 aa23.4■■□□□ 1.34
TOP3A-204ENST00000472959 DOCK5Q9H7D0 1870 aa23.4■■□□□ 1.34
TOP3A-204ENST00000472959 NRCAMQ92823 1304 aa23.39■■□□□ 1.34
TOP3A-204ENST00000472959 C17orf102A2RUQ5 167 aa23.39■■□□□ 1.33
TOP3A-204ENST00000472959 SPIRE1Q08AE8 756 aa23.39■■□□□ 1.33
TOP3A-204ENST00000472959 RESTQ13127 1097 aa23.39■■□□□ 1.33
TOP3A-204ENST00000472959 PTGDRQ13258 359 aa23.39■■□□□ 1.33
TOP3A-204ENST00000472959 PLCB4Q15147 1175 aa23.39■■□□□ 1.33
TOP3A-204ENST00000472959 C4orf32Q8N8J7 132 aa23.39■■□□□ 1.33
TOP3A-204ENST00000472959 ATP6V0A1Q93050 837 aa23.39■■□□□ 1.33
TOP3A-204ENST00000472959 PRDM5Q9NQX1 630 aaPredicted RBP23.39■■□□□ 1.33
TOP3A-204ENST00000472959 POTEB3A0JP26 581 aa23.38■■□□□ 1.33
TOP3A-204ENST00000472959 H0YGN5 161 aa23.38■■□□□ 1.33
TOP3A-204ENST00000472959 EML1O00423 815 aa23.38■■□□□ 1.33
TOP3A-204ENST00000472959 PPFIA1Q13136 1202 aa23.38■■□□□ 1.33
TOP3A-204ENST00000472959 EPHA7Q15375 998 aa23.38■■□□□ 1.33
TOP3A-204ENST00000472959 POTEBQ6S5H4 581 aa23.38■■□□□ 1.33
TOP3A-204ENST00000472959 ATP8B4Q8TF62 1192 aa23.38■■□□□ 1.33
TOP3A-204ENST00000472959 FAM167AQ96KS9 214 aa23.38■■□□□ 1.33
TOP3A-204ENST00000472959 SETD4Q9NVD3 440 aa23.38■■□□□ 1.33
TOP3A-204ENST00000472959 ZMYND8Q9ULU4 1186 aaPredicted RBP23.38■■□□□ 1.33
TOP3A-204ENST00000472959 TRPC6Q9Y210 931 aa23.38■■□□□ 1.33
TOP3A-204ENST00000472959 IGSF9BQ9UPX0 1349 aa23.37■■□□□ 1.33
TOP3A-204ENST00000472959 TRIM43BA6NCK2 446 aa23.37■■□□□ 1.33
TOP3A-204ENST00000472959 RRN3P2A6NIE6 340 aa23.37■■□□□ 1.33
TOP3A-204ENST00000472959 HBP1O60381 514 aa23.37■■□□□ 1.33
TOP3A-204ENST00000472959 BMP15O95972 392 aa23.37■■□□□ 1.33
TOP3A-204ENST00000472959 PRPHP41219 470 aa23.37■■□□□ 1.33
TOP3A-204ENST00000472959 NCAPH2Q6IBW4 605 aa23.37■■□□□ 1.33
TOP3A-204ENST00000472959 SH3RF1Q7Z6J0 888 aa23.37■■□□□ 1.33
TOP3A-204ENST00000472959 CKAP2LQ8IYA6 745 aa23.37■■□□□ 1.33
TOP3A-204ENST00000472959 TRIM43Q96BQ3 446 aaPredicted RBP23.37■■□□□ 1.33
TOP3A-204ENST00000472959 DKC1O60832 514 aaKnown RBP eCLIP23.36■■□□□ 1.33
TOP3A-204ENST00000472959 INSRRP14616 1297 aa23.36■■□□□ 1.33
TOP3A-204ENST00000472959 PSMC5P62195 406 aa23.36■■□□□ 1.33
TOP3A-204ENST00000472959 GRIK4Q16099 956 aa23.36■■□□□ 1.33
TOP3A-204ENST00000472959 TMEM266Q2M3C6 531 aa23.36■■□□□ 1.33
TOP3A-204ENST00000472959 LMBR1Q8WVP7 490 aa23.36■■□□□ 1.33
TOP3A-204ENST00000472959 BBXQ8WY36 941 aaPredicted RBP23.36■■□□□ 1.33
TOP3A-204ENST00000472959 DNAH12Q6ZR08 3092 aa23.36■■□□□ 1.33
TOP3A-204ENST00000472959 PDE4DIPQ5VU43 2346 aa23.36■■□□□ 1.33
TOP3A-204ENST00000472959 ALPK3Q96L96 1907 aa23.35■■□□□ 1.33
TOP3A-204ENST00000472959 P4HBP07237 508 aaKnown RBP23.35■■□□□ 1.33
TOP3A-204ENST00000472959 ZSCAN22P10073 491 aaPredicted RBP23.35■■□□□ 1.33
TOP3A-204ENST00000472959 RAG1P15918 1043 aa23.35■■□□□ 1.33
TOP3A-204ENST00000472959 SYN1P17600 705 aa23.35■■□□□ 1.33
TOP3A-204ENST00000472959 ATP4AP20648 1035 aa23.35■■□□□ 1.33
TOP3A-204ENST00000472959 QARSP47897 775 aaKnown RBP23.35■■□□□ 1.33
TOP3A-204ENST00000472959 FXR2P51116 673 aaKnown RBP eCLIP23.35■■□□□ 1.33
TOP3A-204ENST00000472959 ADAM17P78536 824 aa23.35■■□□□ 1.33
TOP3A-204ENST00000472959 ATP2C1P98194 919 aaPredicted RBP23.35■■□□□ 1.33
TOP3A-204ENST00000472959 PTK7Q13308 1070 aa23.35■■□□□ 1.33
TOP3A-204ENST00000472959 HIC1Q14526 733 aa23.35■■□□□ 1.33
TOP3A-204ENST00000472959 CTAGE1Q96RT6 745 aa23.35■■□□□ 1.33
TOP3A-204ENST00000472959 HIPK3Q9H422 1215 aa23.35■■□□□ 1.33
TOP3A-204ENST00000472959 NRBP2Q9NSY0 501 aa23.35■■□□□ 1.33
TOP3A-204ENST00000472959 CEP131Q9UPN4 1083 aa23.35■■□□□ 1.33
TOP3A-204ENST00000472959 ZNF862O60290 1169 aa23.34■■□□□ 1.33
TOP3A-204ENST00000472959 TIMP1P01033 207 aa23.34■■□□□ 1.33
TOP3A-204ENST00000472959 CYP2C9P11712 490 aa23.34■■□□□ 1.33
TOP3A-204ENST00000472959 TECP42680 631 aa23.34■■□□□ 1.33
TOP3A-204ENST00000472959 ZNF200P98182 395 aaPredicted RBP23.34■■□□□ 1.33
TOP3A-204ENST00000472959 BFSP2Q13515 415 aa23.34■■□□□ 1.33
TOP3A-204ENST00000472959 UGCGQ16739 394 aa23.34■■□□□ 1.33
TOP3A-204ENST00000472959 ZNF484Q5JVG2 852 aa23.34■■□□□ 1.33
TOP3A-204ENST00000472959 SERINC5Q86VE9 423 aa23.34■■□□□ 1.33
TOP3A-204ENST00000472959 CCDC155Q8N6L0 562 aa23.34■■□□□ 1.33
TOP3A-204ENST00000472959 NEK9Q8TD19 979 aa23.34■■□□□ 1.33
TOP3A-204ENST00000472959 LBHD1Q9BQE6 289 aaPredicted RBP23.34■■□□□ 1.33
TOP3A-204ENST00000472959 NOC4LQ9BVI4 516 aaKnown RBP23.34■■□□□ 1.33
TOP3A-204ENST00000472959 RAB34Q9BZG1 259 aa23.34■■□□□ 1.33
TOP3A-204ENST00000472959 COL1A2P08123 1366 aa23.33■■□□□ 1.33
TOP3A-204ENST00000472959 OATP04181 439 aa23.33■■□□□ 1.33
TOP3A-204ENST00000472959 PRKCEQ02156 737 aa23.33■■□□□ 1.33
TOP3A-204ENST00000472959 PDIA5Q14554 519 aa23.33■■□□□ 1.33
TOP3A-204ENST00000472959 XKR3Q5GH77 459 aa23.33■■□□□ 1.33
TOP3A-204ENST00000472959 ARL6IP4Q66PJ3 421 aaKnown RBP23.33■■□□□ 1.33
TOP3A-204ENST00000472959 DTHD1Q6ZMT9 781 aa23.33■■□□□ 1.33
TOP3A-204ENST00000472959 BANK1Q8NDB2 785 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms