RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 C7orf25Q9BPX7 421 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 MTFR1LQ9H019 292 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 GLT8D2Q9H1C3 349 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 MYOZ2Q9NPC6 264 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 EHD2Q9NZN4 543 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 ZEB2O60315 1214 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 EPB41P11171 864 aaKnown RBP14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 EEF1GP26641 437 aaKnown RBP14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 FNTAP49354 379 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 ECM1Q16610 540 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 B4GALNT4Q76KP1 1039 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 GIMAP8Q8ND71 665 aaPredicted RBP14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 CABS1Q96KC9 395 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 TTYH3Q9C0H2 523 aa14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 PPP1R1BQ9UD71 204 aaPredicted RBP14.57□□□□□ -0.08
SCAMP4-207ENST00000472442 SMCHD1A6NHR9 2005 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 VAV2P52735 878 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 TMEM266Q2M3C6 531 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 CALML4Q96GE6 196 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 UIMC1Q96RL1 719 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 GLIS2Q9BZE0 524 aaPredicted RBP14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 ARHGEF10LQ9HCE6 1279 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 RASSF10A6NK89 507 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 ZNF263O14978 683 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 KRT14P02533 472 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 GCFC2P16383 781 aaKnown RBP14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 CXCR5P32302 372 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 MMP14P50281 582 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 SETQ01105 290 aaPredicted RBP14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 MAP3K10Q02779 954 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 KCNK18Q7Z418 384 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 CCDC170Q8IYT3 715 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 PCMTD1Q96MG8 357 aaPredicted RBP14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 ZIM3Q96PE6 472 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 JPH2Q9BR39 696 aaPredicted RBP14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 MLXIPQ9HAP2 919 aa14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 MAGEC2Q9UBF1 373 aaPredicted RBP14.56□□□□□ -0.08
SCAMP4-207ENST00000472442 MEFVO15553 781 aaPredicted RBP14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 POLD1P28340 1107 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 CAP2P40123 477 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 PSEN1P49768 467 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 DNM2P50570 870 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 USP11P51784 963 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 FAM83BQ5T0W9 1011 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 HAUS3Q68CZ6 603 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 NFRKBQ6P4R8 1299 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 EMBQ6PCB8 327 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 CCDC84Q86UT8 332 aaPredicted RBP14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 JDP2Q8WYK2 163 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 EXOC1Q9NV70 894 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 STIM2Q9P246 746 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 CYP3A7-CYP3A51PA0A087WV96 503 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 PLEKP08567 350 aaPredicted RBP14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 CYP3A7P24462 503 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 PRELPP51888 382 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 STAT2P52630 851 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 NNTQ13423 1086 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 ALS2CLQ60I27 953 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 TRIM58Q8NG06 486 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 MBOAT7Q96N66 472 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 KCNMB3Q9NPA1 279 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 ATXN2Q99700 1313 aaKnown RBP14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 TACC1O75410 805 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 FSBPO95073 299 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 MOCS3O95396 460 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 ZBED6P86452 979 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 STK4Q13043 487 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 AP3B2Q13367 1082 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 SNX29Q8TEQ0 813 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 OSBPL9Q96SU4 736 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 TUBGCP2Q9BSJ2 902 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 THAP9Q9H5L6 903 aa14.55□□□□□ -0.08
SCAMP4-207ENST00000472442 MYMKA6NI61 221 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 FCER1AP12319 257 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 GUCY1A3Q02108 690 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 SPA17Q15506 151 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 TMEM119Q4V9L6 283 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 CCDC181Q5TID7 509 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 RUBCNQ92622 972 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 RNPC3Q96LT9 517 aaKnown RBP14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 SGIP1Q9BQI5 828 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 RAB34Q9BZG1 259 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 TSGA10Q9BZW7 698 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 PCDHA12Q9UN75 941 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 CCDC172P0C7W6 258 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 HOXA13P31271 388 aaPredicted RBP14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 ASIC1P78348 528 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 ARHGAP4P98171 946 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 ITIH3Q06033 890 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 PDE4DQ08499 809 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 TBC1D8BQ0IIM8 1120 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 SEMA3FQ13275 785 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 RASA3Q14644 834 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 ZYXQ15942 572 aaKnown RBP14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 KRT79Q5XKE5 535 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 ZNF572Q7Z3I7 529 aaPredicted RBP14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 LARP4BQ92615 738 aaKnown RBP14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 HPS3Q969F9 1004 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 CCDC42Q96M95 316 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 VCPKMTQ9H867 229 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms