RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 TRIM29Q14134 588 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 INF2Q27J81 1249 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 GALNT17Q6IS24 598 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 PDXDC2PQ6P474 469 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 KRT25Q7Z3Z0 450 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 TIFAQ96CG3 184 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 BRMS1Q9HCU9 246 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 TBC1D22BQ9NU19 505 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 TUBE1Q9UJT0 475 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 MICAL3Q7RTP6 2002 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 MARCH6O60337 910 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 JAK2O60674 1132 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 TDP2O95551 362 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 CCNE2O96020 404 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 ATP2A2P16615 1042 aaKnown RBP16.77■□□□□ 0.28
SSR4-208ENST00000471880 USP11P51784 963 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 RABGGTBP53611 331 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 LETM2Q2VYF4 491 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 SWSAP1Q6NVH7 229 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 CCDC83Q8IWF9 413 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 DAGLBQ8NCG7 672 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 CRYGNQ8WXF5 182 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 TNPO1Q92973 898 aaKnown RBP16.77■□□□□ 0.28
SSR4-208ENST00000471880 PCYT2Q99447 389 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 PHF20Q9BVI0 1012 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 PBX4Q9BYU1 374 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 FAM49AQ9H0Q0 323 aaPredicted RBP16.77■□□□□ 0.28
SSR4-208ENST00000471880 ZNF302Q9NR11 478 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 LIMCH1Q9UPQ0 1083 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 EYSQ5T1H1 3165 aa16.77■□□□□ 0.28
SSR4-208ENST00000471880 CHD7Q9P2D1 2997 aa16.77■□□□□ 0.27
SSR4-208ENST00000471880 MYH9P35579 1960 aaKnown RBP16.77■□□□□ 0.27
SSR4-208ENST00000471880 POTEB3A0JP26 581 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 GAS7O60861 476 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 NBNO60934 754 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 LGR5O75473 907 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 PARNO95453 639 aaKnown RBP16.76■□□□□ 0.27
SSR4-208ENST00000471880 INSRRP14616 1297 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 PLCB4Q15147 1175 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 RAB30Q15771 203 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 TRIM71Q2Q1W2 868 aaKnown RBP16.76■□□□□ 0.27
SSR4-208ENST00000471880 LRCH2Q5VUJ6 765 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 POTEBQ6S5H4 581 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 PIK3AP1Q6ZUJ8 805 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 RSPH3Q86UC2 560 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 TRAPPC12Q8WVT3 735 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 GJA10Q969M2 543 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 ZBTB10Q96DT7 871 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 IL17RAQ96F46 866 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 ZBED2Q9BTP6 218 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 TEKT3Q9BXF9 490 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 NKX2-4Q9H2Z4 354 aa16.76■□□□□ 0.27
SSR4-208ENST00000471880 MSH4O15457 936 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 PSAPP07602 524 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 CIITAP33076 1130 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 KRT2P35908 639 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 KRT76Q01546 638 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 RBL2Q08999 1139 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 TCTN1Q2MV58 587 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 CNKSR3Q6P9H4 555 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 TRAF7Q6Q0C0 670 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 RUFY4Q6ZNE9 571 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 PLPPR4Q7Z2D5 763 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 CCDC60Q8IWA6 550 aaPredicted RBP16.75■□□□□ 0.27
SSR4-208ENST00000471880 NSUN7Q8NE18 718 aaKnown RBP16.75■□□□□ 0.27
SSR4-208ENST00000471880 OXER1Q8TDS5 423 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 SEMA6BQ9H3T3 888 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 DDX25Q9UHL0 483 aaKnown RBP16.75■□□□□ 0.27
SSR4-208ENST00000471880 EVPLQ92817 2033 aa16.75■□□□□ 0.27
SSR4-208ENST00000471880 RRN3P2A6NIE6 340 aa16.74■□□□□ 0.27
SSR4-208ENST00000471880 DHX15O43143 795 aaKnown RBP16.74■□□□□ 0.27
SSR4-208ENST00000471880 HOXC8P31273 242 aa16.74■□□□□ 0.27
SSR4-208ENST00000471880 GUCY1B3Q02153 619 aa16.74■□□□□ 0.27
SSR4-208ENST00000471880 IKBKEQ14164 716 aa16.74■□□□□ 0.27
SSR4-208ENST00000471880 NPY5RQ15761 445 aa16.74■□□□□ 0.27
SSR4-208ENST00000471880 ZNF746Q6NUN9 644 aaPredicted RBP16.74■□□□□ 0.27
SSR4-208ENST00000471880 FAM117BQ6P1L5 589 aa16.74■□□□□ 0.27
SSR4-208ENST00000471880 TAF2Q6P1X5 1199 aa16.74■□□□□ 0.27
SSR4-208ENST00000471880 ABHD15Q6UXT9 468 aa16.74■□□□□ 0.27
SSR4-208ENST00000471880 FAM177A1Q8N128 213 aaPredicted RBP16.74■□□□□ 0.27
SSR4-208ENST00000471880 DNAJB3Q8WWF6 145 aa16.74■□□□□ 0.27
SSR4-208ENST00000471880 OSBPL7Q9BZF2 842 aa16.74■□□□□ 0.27
SSR4-208ENST00000471880 ZNF576Q9H609 170 aa16.74■□□□□ 0.27
SSR4-208ENST00000471880 SLC28A3Q9HAS3 691 aa16.74■□□□□ 0.27
SSR4-208ENST00000471880 GABBR1Q9UBS5 961 aa16.74■□□□□ 0.27
SSR4-208ENST00000471880 PRUNE2Q8WUY3 3088 aa16.73■□□□□ 0.27
SSR4-208ENST00000471880 WDR64B1ANS9 1081 aa16.73■□□□□ 0.27
SSR4-208ENST00000471880 KIF28PB7ZC32 967 aa16.73■□□□□ 0.27
SSR4-208ENST00000471880 M0QZ92 97 aa16.73■□□□□ 0.27
SSR4-208ENST00000471880 CCNT1O60563 726 aaKnown RBP16.73■□□□□ 0.27
SSR4-208ENST00000471880 BAIAP3O94812 1187 aa16.73■□□□□ 0.27
SSR4-208ENST00000471880 FDPSP14324 419 aaKnown RBP16.73■□□□□ 0.27
SSR4-208ENST00000471880 MYOGP15173 224 aa16.73■□□□□ 0.27
SSR4-208ENST00000471880 SLC26A2P50443 739 aa16.73■□□□□ 0.27
SSR4-208ENST00000471880 TMEM62Q0P6H9 643 aa16.73■□□□□ 0.27
SSR4-208ENST00000471880 NR5A1Q13285 461 aa16.73■□□□□ 0.27
SSR4-208ENST00000471880 MBTPS1Q14703 1052 aa16.73■□□□□ 0.27
SSR4-208ENST00000471880 PPP2R2DQ66LE6 453 aa16.73■□□□□ 0.27
SSR4-208ENST00000471880 MIER3Q7Z3K6 550 aa16.73■□□□□ 0.27
SSR4-208ENST00000471880 NEK8Q86SG6 692 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms