RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 POLR2MP0CAP2 368 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 SNHG28P0DPA3 235 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 SCG2P13521 617 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 NBL1P41271 181 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 NOVP48745 357 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 PAK2Q13177 524 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 NEDD9Q14511 834 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 GRIK4Q16099 956 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 TMEM266Q2M3C6 531 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 FBXO47Q5MNV8 452 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 MCTP2Q6DN12 878 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 ASTLQ6HA08 431 aaPredicted RBP7.96□□□□□ -1.14
HDAC1-204ENST00000471488 TSHZ1Q6ZSZ6 1077 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 NPAS4Q8IUM7 802 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 TBC1D10CQ8IV04 446 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 VN1R2Q8NFZ6 395 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 PI4K2BQ8TCG2 481 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 ZNF689Q96CS4 500 aaPredicted RBP7.96□□□□□ -1.14
HDAC1-204ENST00000471488 GPR20Q99678 358 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 RNF41Q9H4P4 317 aaPredicted RBP7.96□□□□□ -1.14
HDAC1-204ENST00000471488 AAASQ9NRG9 546 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 TUBE1Q9UJT0 475 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 FBXL21Q9UKT6 434 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 SORCS3Q9UPU3 1222 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 TELO2Q9Y4R8 837 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 PCDHB7Q9Y5E2 793 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 SPTBN4Q9H254 2564 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 PTPRZ1P23471 2315 aaPredicted RBP7.95□□□□□ -1.14
HDAC1-204ENST00000471488 A0A0D9SFI3 127 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 DENND3A2RUS2 1198 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 C2CD4DB7Z1M9 353 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 PROB1E7EW31 1015 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 ZNF213O14771 459 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 FGF18O76093 207 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 TGFB3P10600 412 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 HOXD8P13378 290 aaPredicted RBP7.95□□□□□ -1.14
HDAC1-204ENST00000471488 ATF7P17544 494 aaPredicted RBP7.95□□□□□ -1.14
HDAC1-204ENST00000471488 MX1P20591 662 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 TCF7P36402 384 aaPredicted RBP7.95□□□□□ -1.14
HDAC1-204ENST00000471488 HSD17B4P51659 736 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 ERVFC1P60507 584 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 MRPS6P82932 125 aaKnown RBP7.95□□□□□ -1.14
HDAC1-204ENST00000471488 DUSP6Q16828 381 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 MCMDC2Q4G0Z9 681 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 NAALADL2Q58DX5 795 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 FAM26DQ5JW98 314 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 C20orf194Q5TEA3 1177 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 CES5AQ6NT32 575 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 ANKRD54Q6NXT1 300 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 TAF2Q6P1X5 1199 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 METTL7BQ6UX53 244 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 VSIG10LQ86VR7 867 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 UBALD2Q8IYN6 164 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 STAG2Q8N3U4 1231 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 LINC01599Q8WXQ3 324 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 RILPL2Q969X0 211 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 PPP1R16BQ96T49 567 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 TCF25Q9BQ70 676 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 UBAC1Q9BSL1 405 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 AGO3Q9H9G7 860 aaKnown RBP7.95□□□□□ -1.14
HDAC1-204ENST00000471488 RC3H2Q9HBD1 1191 aaKnown RBP7.95□□□□□ -1.14
HDAC1-204ENST00000471488 HELLSQ9NRZ9 838 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 HCSTQ9UBK5 93 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 DBR1Q9UK59 544 aaKnown RBP7.95□□□□□ -1.14
HDAC1-204ENST00000471488 NRCAMQ92823 1304 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 MYH6P13533 1939 aa7.95□□□□□ -1.14
HDAC1-204ENST00000471488 KIAA1671Q9BY89 1806 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 DOCK5Q9H7D0 1870 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 B4E1Z4 1266 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 KLRF2D3W0D1 207 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 OPLAHO14841 1288 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 FIBPO43427 364 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 PBX3P40426 434 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 MGAT3Q09327 533 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 NMIQ13287 307 aaPredicted RBP7.94□□□□□ -1.14
HDAC1-204ENST00000471488 ANGPT1Q15389 498 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 ALX1Q15699 326 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 RARS2Q5T160 578 aaKnown RBP7.94□□□□□ -1.14
HDAC1-204ENST00000471488 IFIT1BQ5T764 474 aaKnown RBP7.94□□□□□ -1.14
HDAC1-204ENST00000471488 IER5Q5VY09 327 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 STOX1Q6ZVD7 989 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 TMC7Q7Z402 723 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 ZNF589Q86UQ0 364 aaPredicted RBP7.94□□□□□ -1.14
HDAC1-204ENST00000471488 DGKHQ86XP1 1220 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 TDRD5Q8NAT2 981 aaKnown RBP7.94□□□□□ -1.14
HDAC1-204ENST00000471488 RNF169Q8NCN4 708 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 SMARCC2Q8TAQ2 1214 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 RIN2Q8WYP3 895 aaPredicted RBP7.94□□□□□ -1.14
HDAC1-204ENST00000471488 SUSD6Q92537 303 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 EVI5LQ96CN4 794 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 RMDN1Q96DB5 314 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 ZSCAN10Q96SZ4 725 aaPredicted RBP7.94□□□□□ -1.14
HDAC1-204ENST00000471488 CDCA3Q99618 268 aaPredicted RBP7.94□□□□□ -1.14
HDAC1-204ENST00000471488 FTHL17Q9BXU8 183 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 POMKQ9H5K3 350 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 DCTPP1Q9H773 170 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 EHMT1Q9H9B1 1298 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 LIMD1Q9UGP4 676 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 PUF60Q9UHX1 559 aaKnown RBP7.94□□□□□ -1.14
HDAC1-204ENST00000471488 PADI3Q9ULW8 664 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms