RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 AMHR2Q16671 573 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 HSDL1Q3SXM5 330 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 PLEKHG4Q58EX7 1191 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 PTCRAQ6ISU1 281 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-211ENST00000471455 TRAF7Q6Q0C0 670 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 SPRED2Q7Z698 418 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 CHD1LQ86WJ1 897 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 DBF4BQ8NFT6 615 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 C17orf80Q9BSJ5 609 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 USP26Q9BXU7 913 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 TUT1Q9H6E5 874 aaKnown RBP10.55□□□□□ -0.72
CPSF4-211ENST00000471455 FAM217BQ9NTX9 383 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-211ENST00000471455 RWDD3Q9Y3V2 267 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 LGALS2P05162 132 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 SMIM10L2AP0DMW4 78 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 SMIM10L2BP0DMW5 78 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 HOXA13P31271 388 aaPredicted RBP10.54□□□□□ -0.72
CPSF4-211ENST00000471455 HOXC8P31273 242 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 ZNF200P98182 395 aaPredicted RBP10.54□□□□□ -0.72
CPSF4-211ENST00000471455 FUT2Q10981 343 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 EPC2Q52LR7 807 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 METTL7BQ6UX53 244 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.54□□□□□ -0.72
CPSF4-211ENST00000471455 HOMER1Q86YM7 354 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 FAM178BQ8IXR5 827 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 SMC5Q8IY18 1101 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 BANK1Q8NDB2 785 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 WNT8BQ93098 351 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 MTMR8Q96EF0 704 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 C16orf70Q9BSU1 422 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 IFIH1Q9BYX4 1025 aaKnown RBP10.54□□□□□ -0.72
CPSF4-211ENST00000471455 NSUN3Q9H649 340 aaKnown RBP10.54□□□□□ -0.72
CPSF4-211ENST00000471455 MYH7BA7E2Y1 1941 aa10.54□□□□□ -0.72
CPSF4-211ENST00000471455 PALM3A6NDB9 673 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-211ENST00000471455 H3BNC9 293 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 OPLAHO14841 1288 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 FIBPO43427 364 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 RGS20O76081 388 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 RPLP2P05387 115 aaKnown RBP10.53□□□□□ -0.72
CPSF4-211ENST00000471455 ICAM3P32942 547 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 GPM6BQ13491 265 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 GRM4Q14833 912 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 TCTN1Q2MV58 587 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 B4GALNT3Q6L9W6 998 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 XRRA1Q6P2D8 792 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 RALYLQ86SE5 291 aaKnown RBP10.53□□□□□ -0.72
CPSF4-211ENST00000471455 RSPH3Q86UC2 560 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 FCHSD1Q86WN1 690 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 PLEKHM2Q8IWE5 1019 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 STAG2Q8N3U4 1231 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 GIMAP8Q8ND71 665 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-211ENST00000471455 CUL5Q93034 780 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 TOP1MTQ969P6 601 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 PABPC5Q96DU9 382 aaKnown RBP10.53□□□□□ -0.72
CPSF4-211ENST00000471455 LMAN2LQ9H0V9 348 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 PRKAG3Q9UGI9 489 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 MAD2L2Q9UI95 211 aa10.53□□□□□ -0.72
CPSF4-211ENST00000471455 PNMA6FA0A0J9YX94 578 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 FAM86C2PA6NEL3 165 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 TREHO43280 583 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 SORBS3O60504 671 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 CTSHP09668 335 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 NUCB1Q02818 461 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 SEC23AQ15436 765 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 TAF2Q6P1X5 1199 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 EP400NLQ6ZTU2 488 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 NLRX1Q86UT6 975 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 TMEM192Q8IY95 271 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 KRI1Q8N9T8 703 aaKnown RBP10.52□□□□□ -0.73
CPSF4-211ENST00000471455 IL31RAQ8NI17 732 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.52□□□□□ -0.73
CPSF4-211ENST00000471455 NEK9Q8TD19 979 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 RUFY2Q8WXA3 655 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 PPP2R3CQ969Q6 453 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 IL17RAQ96F46 866 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 CDHR1Q96JP9 859 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 INPP4AQ96PE3 977 aaPredicted RBP10.52□□□□□ -0.73
CPSF4-211ENST00000471455 POP1Q99575 1024 aaKnown RBP10.52□□□□□ -0.73
CPSF4-211ENST00000471455 C11orf84Q9BUA3 381 aaPredicted RBP10.52□□□□□ -0.73
CPSF4-211ENST00000471455 UPF3BQ9BZI7 483 aaKnown RBP10.52□□□□□ -0.73
CPSF4-211ENST00000471455 RIOX1Q9H6W3 641 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 C11orf16Q9NQ32 467 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 FRMPD4Q14CM0 1322 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 NRCAMQ92823 1304 aa10.52□□□□□ -0.73
CPSF4-211ENST00000471455 SPATA31C2B4DYI2 1134 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 IFIT3O14879 490 aaKnown RBP10.51□□□□□ -0.73
CPSF4-211ENST00000471455 TRIM66O15016 1216 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 DCXO43602 365 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 PPP1R11O60927 126 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-211ENST00000471455 UPP2O95045 317 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 RB1P06400 928 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 IL9P15248 144 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 CTNNB1P35222 781 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 CLCN1P35523 988 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 ARHGAP4P98171 946 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 SP2Q02086 613 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 WTAPQ15007 396 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 CATIPQ7Z7H3 387 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 FIBCD1Q8N539 461 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 SMARCC2Q8TAQ2 1214 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms