RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 CDCA3Q99618 268 aaPredicted RBP13.03□□□□□ -0.32
MRPL40-203ENST00000471259 PHF7Q9BWX1 381 aaPredicted RBP13.03□□□□□ -0.32
MRPL40-203ENST00000471259 SMARCAD1Q9H4L7 1026 aa13.03□□□□□ -0.32
MRPL40-203ENST00000471259 RC3H2Q9HBD1 1191 aaKnown RBP13.03□□□□□ -0.32
MRPL40-203ENST00000471259 LRFN2Q9ULH4 789 aa13.03□□□□□ -0.32
MRPL40-203ENST00000471259 PCDHB12Q9Y5F1 795 aa13.03□□□□□ -0.32
MRPL40-203ENST00000471259 FRMPD4Q14CM0 1322 aa13.03□□□□□ -0.32
MRPL40-203ENST00000471259 TTC3P53804 2025 aa13.02□□□□□ -0.33
MRPL40-203ENST00000471259 TBX10O75333 385 aa13.02□□□□□ -0.33
MRPL40-203ENST00000471259 ATF7P17544 494 aaPredicted RBP13.02□□□□□ -0.33
MRPL40-203ENST00000471259 TCF7P36402 384 aaPredicted RBP13.02□□□□□ -0.33
MRPL40-203ENST00000471259 MRPS9P82933 396 aaKnown RBP13.02□□□□□ -0.33
MRPL40-203ENST00000471259 DLX2Q07687 328 aaPredicted RBP13.02□□□□□ -0.33
MRPL40-203ENST00000471259 SIGLEC14Q08ET2 396 aa13.02□□□□□ -0.33
MRPL40-203ENST00000471259 LPIN1Q14693 890 aa13.02□□□□□ -0.33
MRPL40-203ENST00000471259 GRM4Q14833 912 aa13.02□□□□□ -0.33
MRPL40-203ENST00000471259 FBXO47Q5MNV8 452 aa13.02□□□□□ -0.33
MRPL40-203ENST00000471259 CATIPQ7Z7H3 387 aa13.02□□□□□ -0.33
MRPL40-203ENST00000471259 MICAL1Q8TDZ2 1067 aa13.02□□□□□ -0.33
MRPL40-203ENST00000471259 GPKOWQ92917 476 aaPredicted RBP eCLIP13.02□□□□□ -0.33
MRPL40-203ENST00000471259 MSLNLQ96KJ4 702 aa13.02□□□□□ -0.33
MRPL40-203ENST00000471259 PIGSQ96S52 555 aa13.02□□□□□ -0.33
MRPL40-203ENST00000471259 AZI2Q9H6S1 392 aa13.02□□□□□ -0.33
MRPL40-203ENST00000471259 ALG13Q9NP73 1137 aaKnown RBP13.02□□□□□ -0.33
MRPL40-203ENST00000471259 RTEL1Q9NZ71 1219 aa13.02□□□□□ -0.33
MRPL40-203ENST00000471259 SEC63Q9UGP8 760 aaKnown RBP13.02□□□□□ -0.33
MRPL40-203ENST00000471259 MYO7AQ13402 2215 aa13.02□□□□□ -0.33
MRPL40-203ENST00000471259 LOC730098B7Z3J9 87 aa13.01□□□□□ -0.33
MRPL40-203ENST00000471259 PPP1R11O60927 126 aaPredicted RBP13.01□□□□□ -0.33
MRPL40-203ENST00000471259 RRP1P56182 461 aaKnown RBP13.01□□□□□ -0.33
MRPL40-203ENST00000471259 MRPS6P82932 125 aaKnown RBP13.01□□□□□ -0.33
MRPL40-203ENST00000471259 SP4Q02446 784 aa13.01□□□□□ -0.33
MRPL40-203ENST00000471259 MGAT3Q09327 533 aa13.01□□□□□ -0.33
MRPL40-203ENST00000471259 CBX2Q14781 532 aaPredicted RBP13.01□□□□□ -0.33
MRPL40-203ENST00000471259 SEC23AQ15436 765 aa13.01□□□□□ -0.33
MRPL40-203ENST00000471259 GRIK4Q16099 956 aa13.01□□□□□ -0.33
MRPL40-203ENST00000471259 RALYLQ86SE5 291 aaKnown RBP13.01□□□□□ -0.33
MRPL40-203ENST00000471259 TRIM50Q86XT4 487 aa13.01□□□□□ -0.33
MRPL40-203ENST00000471259 NME8Q8N427 588 aa13.01□□□□□ -0.33
MRPL40-203ENST00000471259 SPPL3Q8TCT6 385 aa13.01□□□□□ -0.33
MRPL40-203ENST00000471259 POF1BQ8WVV4 589 aa13.01□□□□□ -0.33
MRPL40-203ENST00000471259 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
MRPL40-203ENST00000471259 RWDD1Q9H446 243 aaPredicted RBP13.01□□□□□ -0.33
MRPL40-203ENST00000471259 OSBPL3Q9H4L5 887 aa13.01□□□□□ -0.33
MRPL40-203ENST00000471259 TLE6Q9H808 572 aa13.01□□□□□ -0.33
MRPL40-203ENST00000471259 CDY2AQ9Y6F7 541 aa13.01□□□□□ -0.33
MRPL40-203ENST00000471259 MBLAC1A4D2B0 266 aaPredicted RBP13□□□□□ -0.33
MRPL40-203ENST00000471259 PIK3CDO00329 1044 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 IFIT3O14879 490 aaKnown RBP13□□□□□ -0.33
MRPL40-203ENST00000471259 ITGB1P05556 798 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 LINC00271P0C7V0 271 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 PRR29P0C7W0 189 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 SCG2P13521 617 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 SMARCA1P28370 1054 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 KIF5BP33176 963 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 NRIP1P48552 1158 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 PAK2Q13177 524 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 WTAPQ15007 396 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 SPOUT1Q5T280 376 aaKnown RBP13□□□□□ -0.33
MRPL40-203ENST00000471259 ZBTB33Q86T24 672 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 KLHL23Q8NBE8 558 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 PRSS33Q8NF86 280 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 DNAJB3Q8WWF6 145 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 RRP36Q96EU6 259 aaKnown RBP13□□□□□ -0.33
MRPL40-203ENST00000471259 ZFP91Q96JP5 570 aaPredicted RBP13□□□□□ -0.33
MRPL40-203ENST00000471259 NEK1Q96PY6 1258 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 LZTS2Q9BRK4 669 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 TRPV2Q9Y5S1 764 aa13□□□□□ -0.33
MRPL40-203ENST00000471259 MRPL42Q9Y6G3 142 aaKnown RBP13□□□□□ -0.33
MRPL40-203ENST00000471259 TECTAO75443 2155 aa12.99□□□□□ -0.33
MRPL40-203ENST00000471259 LINC01565O15544 149 aa12.99□□□□□ -0.33
MRPL40-203ENST00000471259 CSPG5O95196 566 aa12.99□□□□□ -0.33
MRPL40-203ENST00000471259 GNAQP50148 359 aa12.99□□□□□ -0.33
MRPL40-203ENST00000471259 CTCFLQ8NI51 663 aaPredicted RBP12.99□□□□□ -0.33
MRPL40-203ENST00000471259 RUFY2Q8WXA3 655 aa12.99□□□□□ -0.33
MRPL40-203ENST00000471259 ATOH1Q92858 354 aaPredicted RBP12.99□□□□□ -0.33
MRPL40-203ENST00000471259 MAP3K14Q99558 947 aa12.99□□□□□ -0.33
MRPL40-203ENST00000471259 PUF60Q9UHX1 559 aaKnown RBP12.99□□□□□ -0.33
MRPL40-203ENST00000471259 USP15Q9Y4E8 981 aaPredicted RBP12.99□□□□□ -0.33
MRPL40-203ENST00000471259 PCDHB7Q9Y5E2 793 aa12.99□□□□□ -0.33
MRPL40-203ENST00000471259 GFRA3O60609 400 aa12.98□□□□□ -0.33
MRPL40-203ENST00000471259 CD52P31358 61 aa12.98□□□□□ -0.33
MRPL40-203ENST00000471259 GTF2F1P35269 517 aaKnown RBP eCLIP12.98□□□□□ -0.33
MRPL40-203ENST00000471259 SEMA3FQ13275 785 aa12.98□□□□□ -0.33
MRPL40-203ENST00000471259 MTMR1Q13613 665 aa12.98□□□□□ -0.33
MRPL40-203ENST00000471259 BMS1Q14692 1282 aaKnown RBP12.98□□□□□ -0.33
MRPL40-203ENST00000471259 RUFY4Q6ZNE9 571 aa12.98□□□□□ -0.33
MRPL40-203ENST00000471259 NCOA7Q8NI08 942 aa12.98□□□□□ -0.33
MRPL40-203ENST00000471259 RPGRIP1Q96KN7 1286 aa12.98□□□□□ -0.33
MRPL40-203ENST00000471259 OSBPL7Q9BZF2 842 aa12.98□□□□□ -0.33
MRPL40-203ENST00000471259 TLR9Q9NR96 1032 aa12.98□□□□□ -0.33
MRPL40-203ENST00000471259 C1orf112Q9NSG2 853 aa12.98□□□□□ -0.33
MRPL40-203ENST00000471259 CLEC1BQ9P126 229 aa12.98□□□□□ -0.33
MRPL40-203ENST00000471259 NR2E1Q9Y466 385 aa12.98□□□□□ -0.33
MRPL40-203ENST00000471259 IGSF9BQ9UPX0 1349 aa12.97□□□□□ -0.33
MRPL40-203ENST00000471259 SPDYE3A6NKU9 549 aa12.97□□□□□ -0.33
MRPL40-203ENST00000471259 HOXB8P17481 243 aaPredicted RBP12.97□□□□□ -0.33
MRPL40-203ENST00000471259 MARK3P27448 753 aa12.97□□□□□ -0.33
MRPL40-203ENST00000471259 AVPR2P30518 371 aa12.97□□□□□ -0.33
MRPL40-203ENST00000471259 SARSP49591 514 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms