RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 CD244Q9BZW8 370 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 KANSL2Q9H9L4 492 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 TRIM39Q9HCM9 518 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 USP35Q9P2H5 1018 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 CBLCQ9ULV8 474 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 SRPK3Q9UPE1 567 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 TELO2Q9Y4R8 837 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 A0A1B0GTL3 188 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 TCRBV16S1A1N1A0A5B0 115 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 RAPGEF3O95398 923 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 AMY2AP04746 511 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 CKMP06732 381 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 ADRB1P08588 477 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 ENO2P09104 434 aaPredicted RBP6□□□□□ -1.45
COL9A1-206ENST00000470652 KRT15P19012 456 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 AMY2BP19961 511 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 GJA4P35212 333 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 ADAM9Q13443 819 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 FIGNQ5HY92 759 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 BTBD8Q5XKL5 378 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 VASNQ6EMK4 673 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 KRTAP5-3Q6L8H2 238 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 HOMER1Q86YM7 354 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 RNPC3Q96LT9 517 aaKnown RBP6□□□□□ -1.45
COL9A1-206ENST00000470652 ATP23Q9Y6H3 246 aa6□□□□□ -1.45
COL9A1-206ENST00000470652 ABCA10Q8WWZ4 1543 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 IFT140Q96RY7 1462 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 B4E1Z4 1266 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 ZNF561-AS1K7EIQ3 104 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 MAN2B1O00754 1011 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 PTPN1P18031 435 aaKnown RBP5.99□□□□□ -1.45
COL9A1-206ENST00000470652 JAM2P57087 298 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 PRR31Q5SQ13 230 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 FGD2Q7Z6J4 655 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 PTRH1Q86Y79 214 aaKnown RBP5.99□□□□□ -1.45
COL9A1-206ENST00000470652 BORCS6Q96GS4 357 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 CLUHP3Q96NS8 147 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 SPATA25Q9BR10 227 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 ADAM7Q9H2U9 754 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 TMPRSS5Q9H3S3 457 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 DLL4Q9NR61 685 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 COQ6Q9Y2Z9 468 aa5.99□□□□□ -1.45
COL9A1-206ENST00000470652 ESYT3A0FGR9 886 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 PPP1R12AO14974 1030 aaPredicted RBP5.98□□□□□ -1.45
COL9A1-206ENST00000470652 RFPL3O75679 317 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 ASMTLO95671 621 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 KCNA6P17658 529 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 TCEA2Q15560 299 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 CD276Q5ZPR3 534 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 HHIPL2Q6UWX4 724 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 TMC5Q6UXY8 1006 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 NOP9Q86U38 636 aaKnown RBP5.98□□□□□ -1.45
COL9A1-206ENST00000470652 PROSER1Q86XN7 944 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 ADAMTS17Q8TE56 1095 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 APPBP2Q92624 585 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 SMURF1Q9HCE7 757 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 RIC8BQ9NVN3 520 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 WASF3Q9UPY6 502 aa5.98□□□□□ -1.45
COL9A1-206ENST00000470652 CHD1O14646 1710 aa5.97□□□□□ -1.45
COL9A1-206ENST00000470652 ACOT7O00154 380 aa5.97□□□□□ -1.45
COL9A1-206ENST00000470652 CLASP2O75122 1294 aaKnown RBP5.97□□□□□ -1.45
COL9A1-206ENST00000470652 IGFALSP35858 605 aa5.97□□□□□ -1.45
COL9A1-206ENST00000470652 PLP2Q04941 152 aa5.97□□□□□ -1.45
COL9A1-206ENST00000470652 ZXDCQ2QGD7 858 aaPredicted RBP5.97□□□□□ -1.45
COL9A1-206ENST00000470652 FAM26FQ5R3K3 315 aa5.97□□□□□ -1.45
COL9A1-206ENST00000470652 PRAMEF18Q5VWM3 479 aa5.97□□□□□ -1.45
COL9A1-206ENST00000470652 OVCH1Q7RTY7 1134 aa5.97□□□□□ -1.45
COL9A1-206ENST00000470652 ZNF761Q86XN6 746 aaPredicted RBP5.97□□□□□ -1.45
COL9A1-206ENST00000470652 CISD2Q8N5K1 135 aaKnown RBP5.97□□□□□ -1.45
COL9A1-206ENST00000470652 IGSF22Q8N9C0 903 aa5.97□□□□□ -1.45
COL9A1-206ENST00000470652 DTX3Q8N9I9 347 aa5.97□□□□□ -1.45
COL9A1-206ENST00000470652 ZSWIM3Q96MP5 696 aa5.97□□□□□ -1.45
COL9A1-206ENST00000470652 TEPSINQ96N21 525 aa5.97□□□□□ -1.45
COL9A1-206ENST00000470652 RBPJLQ9UBG7 517 aa5.97□□□□□ -1.45
COL9A1-206ENST00000470652 GAPVD1Q14C86 1478 aa5.96□□□□□ -1.45
COL9A1-206ENST00000470652 SNAPC4Q5SXM2 1469 aa5.96□□□□□ -1.45
COL9A1-206ENST00000470652 FAM90A27PA6NNH2 459 aa5.96□□□□□ -1.46
COL9A1-206ENST00000470652 DDX3XO00571 662 aaKnown RBP eCLIP5.96□□□□□ -1.46
COL9A1-206ENST00000470652 ASLP04424 464 aa5.96□□□□□ -1.46
COL9A1-206ENST00000470652 IL13P35225 146 aa5.96□□□□□ -1.46
COL9A1-206ENST00000470652 GJA9P57773 515 aa5.96□□□□□ -1.46
COL9A1-206ENST00000470652 PFKPQ01813 784 aa5.96□□□□□ -1.46
COL9A1-206ENST00000470652 KIAA2012Q0VF49 1180 aa5.96□□□□□ -1.46
COL9A1-206ENST00000470652 DBPQ10586 325 aaPredicted RBP5.96□□□□□ -1.46
COL9A1-206ENST00000470652 NT5DC1Q5TFE4 455 aa5.96□□□□□ -1.46
COL9A1-206ENST00000470652 ABHD17CQ6PCB6 329 aa5.96□□□□□ -1.46
COL9A1-206ENST00000470652 C16orf86Q6ZW13 317 aa5.96□□□□□ -1.46
COL9A1-206ENST00000470652 FRMD5Q7Z6J6 570 aa5.96□□□□□ -1.46
COL9A1-206ENST00000470652 DDX53Q86TM3 631 aaKnown RBP5.96□□□□□ -1.46
COL9A1-206ENST00000470652 L2HGDHQ9H9P8 463 aa5.96□□□□□ -1.46
COL9A1-206ENST00000470652 USP40Q9NVE5 1235 aa5.96□□□□□ -1.46
COL9A1-206ENST00000470652 CROTQ9UKG9 612 aa5.96□□□□□ -1.46
COL9A1-206ENST00000470652 OPA1O60313 960 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 NOBOXO60393 691 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 CHGBP05060 677 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 ZNF28P17035 718 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 FLT3P36888 993 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 MLLT6P55198 1093 aaPredicted RBP5.95□□□□□ -1.46
COL9A1-206ENST00000470652 ADAMTS12P58397 1594 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 HERVK_113P62684 666 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms