RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 RASGRP4Q8TDF6 673 aa13.96□□□□□ -0.17
LSM2-209ENST00000470083 MFSD1Q9H3U5 465 aa13.96□□□□□ -0.17
LSM2-209ENST00000470083 CHMP4BQ9H444 224 aaKnown RBP13.96□□□□□ -0.17
LSM2-209ENST00000470083 BCAS3Q9H6U6 928 aa13.96□□□□□ -0.17
LSM2-209ENST00000470083 TSHZ2Q9NRE2 1034 aa13.96□□□□□ -0.17
LSM2-209ENST00000470083 MAP3K20Q9NYL2 800 aaKnown RBP13.96□□□□□ -0.17
LSM2-209ENST00000470083 SUPT16HQ9Y5B9 1047 aaKnown RBP13.96□□□□□ -0.17
LSM2-209ENST00000470083 CEP250Q9BV73 2442 aa13.95□□□□□ -0.18
LSM2-209ENST00000470083 PPFIA3O75145 1194 aa13.95□□□□□ -0.18
LSM2-209ENST00000470083 STAG3L1P0CL83 205 aa13.95□□□□□ -0.18
LSM2-209ENST00000470083 HOXB8P17481 243 aaPredicted RBP13.95□□□□□ -0.18
LSM2-209ENST00000470083 CCND2P30279 289 aa13.95□□□□□ -0.18
LSM2-209ENST00000470083 TECP42680 631 aa13.95□□□□□ -0.18
LSM2-209ENST00000470083 GPR20Q99678 358 aa13.95□□□□□ -0.18
LSM2-209ENST00000470083 FTHL17Q9BXU8 183 aa13.95□□□□□ -0.18
LSM2-209ENST00000470083 AGO3Q9H9G7 860 aaKnown RBP13.95□□□□□ -0.18
LSM2-209ENST00000470083 PCDHB12Q9Y5F1 795 aa13.95□□□□□ -0.18
LSM2-209ENST00000470083 TTC41PQ6P2S7 1318 aa13.94□□□□□ -0.18
LSM2-209ENST00000470083 C2CD4DB7Z1M9 353 aa13.94□□□□□ -0.18
LSM2-209ENST00000470083 FSCN2O14926 492 aa13.94□□□□□ -0.18
LSM2-209ENST00000470083 PCP11498 1178 aaKnown RBP13.94□□□□□ -0.18
LSM2-209ENST00000470083 NEDD9Q14511 834 aa13.94□□□□□ -0.18
LSM2-209ENST00000470083 PUM1Q14671 1186 aaKnown RBP eCLIP13.94□□□□□ -0.18
LSM2-209ENST00000470083 ASPRV1Q53RT3 343 aa13.94□□□□□ -0.18
LSM2-209ENST00000470083 RTN4RL1Q86UN2 441 aaPredicted RBP13.94□□□□□ -0.18
LSM2-209ENST00000470083 DGKHQ86XP1 1220 aa13.94□□□□□ -0.18
LSM2-209ENST00000470083 CNTNAP3BQ96NU0 1288 aa13.94□□□□□ -0.18
LSM2-209ENST00000470083 CNTNAP3Q9BZ76 1288 aa13.94□□□□□ -0.18
LSM2-209ENST00000470083 SEMA4AQ9H3S1 761 aa13.94□□□□□ -0.18
LSM2-209ENST00000470083 SMOC2Q9H3U7 446 aa13.94□□□□□ -0.18
LSM2-209ENST00000470083 JMJD4Q9H9V9 463 aa13.94□□□□□ -0.18
LSM2-209ENST00000470083 CDY2AQ9Y6F7 541 aa13.94□□□□□ -0.18
LSM2-209ENST00000470083 DHX16O60231 1041 aaKnown RBP13.93□□□□□ -0.18
LSM2-209ENST00000470083 FGF18O76093 207 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 FGAP02671 866 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 SCG2P13521 617 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 CD52P31358 61 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 ERVFC1P60507 584 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 GNPTABQ3T906 1256 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 CWF19L1Q69YN2 538 aaKnown RBP13.93□□□□□ -0.18
LSM2-209ENST00000470083 CYFIP1Q7L576 1253 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 CCDC105Q8IYK2 499 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 MIER1Q8N108 512 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 SAMD3Q8N6K7 520 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 PNMA1Q8ND90 353 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 PI4K2BQ8TCG2 481 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 NECTIN4Q96NY8 510 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 APOL5Q9BWW9 433 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 AMNQ9BXJ7 453 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 AAASQ9NRG9 546 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 SQORQ9Y6N5 450 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 CFAP47Q6ZTR5 3102 aa13.93□□□□□ -0.18
LSM2-209ENST00000470083 MBLAC1A4D2B0 266 aaPredicted RBP13.92□□□□□ -0.18
LSM2-209ENST00000470083 LMNAP02545 664 aaKnown RBP13.92□□□□□ -0.18
LSM2-209ENST00000470083 RPLP2P05387 115 aaKnown RBP13.92□□□□□ -0.18
LSM2-209ENST00000470083 AOC1P19801 751 aa13.92□□□□□ -0.18
LSM2-209ENST00000470083 HOXA13P31271 388 aaPredicted RBP13.92□□□□□ -0.18
LSM2-209ENST00000470083 GATMP50440 423 aa13.92□□□□□ -0.18
LSM2-209ENST00000470083 PPFIA1Q13136 1202 aa13.92□□□□□ -0.18
LSM2-209ENST00000470083 ANGPT1Q15389 498 aa13.92□□□□□ -0.18
LSM2-209ENST00000470083 UTP14CQ5TAP6 766 aaKnown RBP13.92□□□□□ -0.18
LSM2-209ENST00000470083 KIAA2013Q8IYS2 634 aa13.92□□□□□ -0.18
LSM2-209ENST00000470083 DNAJB3Q8WWF6 145 aa13.92□□□□□ -0.18
LSM2-209ENST00000470083 ZFP91Q96JP5 570 aaPredicted RBP13.92□□□□□ -0.18
LSM2-209ENST00000470083 INPP4AQ96PE3 977 aaPredicted RBP13.92□□□□□ -0.18
LSM2-209ENST00000470083 POMKQ9H5K3 350 aa13.92□□□□□ -0.18
LSM2-209ENST00000470083 TUBE1Q9UJT0 475 aa13.92□□□□□ -0.18
LSM2-209ENST00000470083 ZMYM6O95789 1325 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 SPATA31C2B4DYI2 1134 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 CCER2I3L3R5 266 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 ASGR2P07307 311 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 MRPS6P82932 125 aaKnown RBP13.91□□□□□ -0.18
LSM2-209ENST00000470083 TPRNQ4KMQ1 711 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 SPOUT1Q5T280 376 aaKnown RBP13.91□□□□□ -0.18
LSM2-209ENST00000470083 MFSD6Q6ZSS7 791 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 THNSL1Q8IYQ7 743 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 FLCNQ8NFG4 579 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 KCNG4Q8TDN1 519 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 ADAM7Q9H2U9 754 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 VAT1LQ9HCJ6 419 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 TMEM260Q9NX78 707 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 DLL3Q9NYJ7 618 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 CDH22Q9UJ99 828 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 LRFN2Q9ULH4 789 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 LZTS1Q9Y250 596 aa13.91□□□□□ -0.18
LSM2-209ENST00000470083 MYH7BA7E2Y1 1941 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 FIBPO43427 364 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 STAM2O75886 525 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 PARP1P09874 1014 aaKnown RBP13.9□□□□□ -0.18
LSM2-209ENST00000470083 HAND2P61296 217 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 ITIH3Q06033 890 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 SEMA3FQ13275 785 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 GRIK4Q16099 956 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 PLPP4Q5VZY2 271 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 CES5AQ6NT32 575 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 LLGL2Q6P1M3 1020 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 TBC1D10CQ8IV04 446 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 ZDHHC14Q8IZN3 488 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 DTWD2Q8NBA8 298 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 ESR2Q92731 530 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms