RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 M0R2N6 131 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 DDX39AO00148 427 aaKnown RBP14.28□□□□□ -0.12
ABCF1-204ENST00000468958 DHX15O43143 795 aaKnown RBP14.28□□□□□ -0.12
ABCF1-204ENST00000468958 LGR5O75473 907 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 ARHGEF15O94989 841 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 CXCL10P02778 98 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 PFKMP08237 780 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 HMGN5P82970 282 aaKnown RBP14.28□□□□□ -0.12
ABCF1-204ENST00000468958 ME3Q16798 604 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 GALNT17Q6IS24 598 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 RUFY4Q6ZNE9 571 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 REXO1Q8N1G1 1221 aaKnown RBP14.28□□□□□ -0.12
ABCF1-204ENST00000468958 LENG9Q96B70 501 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 TIFAQ96CG3 184 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 NKX2-4Q9H2Z4 354 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 C6orf50Q9HD87 102 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 JPH1Q9HDC5 661 aaPredicted RBP14.28□□□□□ -0.12
ABCF1-204ENST00000468958 GJB4Q9NTQ9 266 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 SLC9A2Q9UBY0 812 aa14.28□□□□□ -0.12
ABCF1-204ENST00000468958 NLRC5Q86WI3 1866 aa14.27□□□□□ -0.12
ABCF1-204ENST00000468958 EMSYQ7Z589 1322 aa14.27□□□□□ -0.12
ABCF1-204ENST00000468958 ATG7O95352 703 aa14.27□□□□□ -0.13
ABCF1-204ENST00000468958 ACTR2P61160 394 aa14.27□□□□□ -0.13
ABCF1-204ENST00000468958 DEFB103AP81534 67 aa14.27□□□□□ -0.13
ABCF1-204ENST00000468958 ST3GAL1Q11201 340 aa14.27□□□□□ -0.13
ABCF1-204ENST00000468958 TRIM29Q14134 588 aa14.27□□□□□ -0.13
ABCF1-204ENST00000468958 MARCH8Q5T0T0 291 aa14.27□□□□□ -0.13
ABCF1-204ENST00000468958 NIPA1Q7RTP0 329 aa14.27□□□□□ -0.13
ABCF1-204ENST00000468958 PLA2G4DQ86XP0 818 aa14.27□□□□□ -0.13
ABCF1-204ENST00000468958 CCDC155Q8N6L0 562 aa14.27□□□□□ -0.13
ABCF1-204ENST00000468958 FTOQ9C0B1 505 aaKnown RBP eCLIP14.27□□□□□ -0.136e-7■■■□□ 15
ABCF1-204ENST00000468958 ZNF576Q9H609 170 aa14.27□□□□□ -0.13
ABCF1-204ENST00000468958 SLC4A7Q9Y6M7 1214 aa14.27□□□□□ -0.13
ABCF1-204ENST00000468958 CHD7Q9P2D1 2997 aa14.27□□□□□ -0.13
ABCF1-204ENST00000468958 REV3LO60673 3130 aa14.26□□□□□ -0.13
ABCF1-204ENST00000468958 ATG2AQ2TAZ0 1938 aa14.26□□□□□ -0.13
ABCF1-204ENST00000468958 TMEM265A0A087WTH1 108 aa14.26□□□□□ -0.13
ABCF1-204ENST00000468958 IGKV6D-21A0A0A0MT36 114 aa14.26□□□□□ -0.13
ABCF1-204ENST00000468958 CTSHP09668 335 aa14.26□□□□□ -0.13
ABCF1-204ENST00000468958 THPOP40225 353 aa14.26□□□□□ -0.13
ABCF1-204ENST00000468958 SPRED2Q7Z698 418 aa14.26□□□□□ -0.13
ABCF1-204ENST00000468958 NECAB1Q8N987 351 aa14.26□□□□□ -0.13
ABCF1-204ENST00000468958 TRAPPC12Q8WVT3 735 aa14.26□□□□□ -0.13
ABCF1-204ENST00000468958 BRMS1Q9HCU9 246 aa14.26□□□□□ -0.13
ABCF1-204ENST00000468958 ORC3Q9UBD5 711 aaPredicted RBP14.26□□□□□ -0.13
ABCF1-204ENST00000468958 ZNF215Q9UL58 517 aaPredicted RBP14.26□□□□□ -0.13
ABCF1-204ENST00000468958 KIAA1671Q9BY89 1806 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 FDPSP14324 419 aaKnown RBP14.25□□□□□ -0.13
ABCF1-204ENST00000468958 ATP2A2P16615 1042 aaKnown RBP14.25□□□□□ -0.13
ABCF1-204ENST00000468958 ATP4AP20648 1035 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 CIITAP33076 1130 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 ZNF76P36508 570 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 NLRP5P59047 1200 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 WDR5P61964 334 aaKnown RBP14.25□□□□□ -0.13
ABCF1-204ENST00000468958 PLCB4Q15147 1175 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 GRIK4Q16099 956 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 CNKSR3Q6P9H4 555 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 ABHD15Q6UXT9 468 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 CCDC60Q8IWA6 550 aaPredicted RBP14.25□□□□□ -0.13
ABCF1-204ENST00000468958 FAM184AQ8NB25 1140 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 GJA10Q969M2 543 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 MTIF3Q9H2K0 278 aaKnown RBP14.25□□□□□ -0.13
ABCF1-204ENST00000468958 SMARCAD1Q9H4L7 1026 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 ERAP1Q9NZ08 941 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 PCDHA4Q9UN74 947 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 KCNJ14Q9UNX9 436 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.25□□□□□ -0.13
ABCF1-204ENST00000468958 UNC80Q8N2C7 3258 aa14.25□□□□□ -0.13
ABCF1-204ENST00000468958 COL4A6Q14031 1691 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 NRCAMQ92823 1304 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 MBLAC1A4D2B0 266 aaPredicted RBP14.24□□□□□ -0.13
ABCF1-204ENST00000468958 RSPH10B2B2RC85 870 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 IPO5O00410 1097 aaKnown RBP14.24□□□□□ -0.13
ABCF1-204ENST00000468958 RSPH10BP0C881 870 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 ACTN1P12814 892 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 INSRRP14616 1297 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 MGAT3Q09327 533 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 PPFIA1Q13136 1202 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 PRR16Q569H4 304 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.24□□□□□ -0.13
ABCF1-204ENST00000468958 CCDC83Q8IWF9 413 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 HSCBQ8IWL3 235 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 DAGLBQ8NCG7 672 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 NSUN7Q8NE18 718 aaKnown RBP14.24□□□□□ -0.13
ABCF1-204ENST00000468958 DBF4BQ8NFT6 615 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 GLG1Q92896 1179 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 SDF4Q9BRK5 362 aa14.24□□□□□ -0.13
ABCF1-204ENST00000468958 ARID2Q68CP9 1835 aa14.23□□□□□ -0.13
ABCF1-204ENST00000468958 LCHNA4D1U4 455 aa14.23□□□□□ -0.13
ABCF1-204ENST00000468958 BAIAP3O94812 1187 aa14.23□□□□□ -0.13
ABCF1-204ENST00000468958 TDP2O95551 362 aa14.23□□□□□ -0.13
ABCF1-204ENST00000468958 CHRNA1P02708 482 aa14.23□□□□□ -0.13
ABCF1-204ENST00000468958 IGBP1P78318 339 aa14.23□□□□□ -0.13
ABCF1-204ENST00000468958 ADGRE1Q14246 886 aa14.23□□□□□ -0.13
ABCF1-204ENST00000468958 RAB30Q15771 203 aa14.23□□□□□ -0.13
ABCF1-204ENST00000468958 PLEKHG4Q58EX7 1191 aa14.23□□□□□ -0.13
ABCF1-204ENST00000468958 EARS2Q5JPH6 523 aaKnown RBP14.23□□□□□ -0.13
ABCF1-204ENST00000468958 FAM26DQ5JW98 314 aa14.23□□□□□ -0.13
ABCF1-204ENST00000468958 HERC6Q8IVU3 1022 aa14.23□□□□□ -0.13
ABCF1-204ENST00000468958 BLIDQ8IZY5 108 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms