RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 PPP1R13LQ8WUF5 828 aa16.72■□□□□ 0.27
TMEM39A-205ENST00000468676 ATP6V0A1Q93050 837 aa16.72■□□□□ 0.27
TMEM39A-205ENST00000468676 RNPEPQ9H4A4 650 aa16.72■□□□□ 0.27
TMEM39A-205ENST00000468676 RRN3P2A6NIE6 340 aa16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 MARCH6O60337 910 aa16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 BAG4O95429 457 aaKnown RBP16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 PARNO95453 639 aaKnown RBP16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 RBL2Q08999 1139 aa16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 CUL4AQ13619 759 aa16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 EARS2Q5JPH6 523 aaKnown RBP16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 HABP4Q5JVS0 413 aaKnown RBP16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 SERINC5Q86VE9 423 aa16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 SLFN12Q8IYM2 578 aa16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 RPUSD2Q8IZ73 545 aaKnown RBP16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 TDHQ8IZJ6 230 aa16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 UIMC1Q96RL1 719 aa16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 CTAGE1Q96RT6 745 aa16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 PCYT2Q99447 389 aa16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 ZNF302Q9NR11 478 aa16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 SAMM50Q9Y512 469 aa16.71■□□□□ 0.27
TMEM39A-205ENST00000468676 SLC37A4O43826 429 aa16.7■□□□□ 0.26
TMEM39A-205ENST00000468676 MARK3P27448 753 aa16.7■□□□□ 0.26
TMEM39A-205ENST00000468676 GJB2P29033 226 aa16.7■□□□□ 0.26
TMEM39A-205ENST00000468676 RFC2P35250 354 aa16.7■□□□□ 0.26
TMEM39A-205ENST00000468676 PPFIA1Q13136 1202 aa16.7■□□□□ 0.26
TMEM39A-205ENST00000468676 SWSAP1Q6NVH7 229 aa16.7■□□□□ 0.26
TMEM39A-205ENST00000468676 PDXDC2PQ6P474 469 aa16.7■□□□□ 0.26
TMEM39A-205ENST00000468676 NOSTRINQ8IVI9 506 aa16.7■□□□□ 0.26
TMEM39A-205ENST00000468676 KCNMB3Q9NPA1 279 aa16.7■□□□□ 0.26
TMEM39A-205ENST00000468676 DISC1Q9NRI5 854 aa16.7■□□□□ 0.26
TMEM39A-205ENST00000468676 SETD4Q9NVD3 440 aa16.7■□□□□ 0.26
TMEM39A-205ENST00000468676 WDR81Q562E7 1941 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 POTEB3A0JP26 581 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 FAM205CA6NFA0 338 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 CAND2O75155 1236 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 RPLP2P05387 115 aaKnown RBP16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 PFKMP08237 780 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 CSF2RAP15509 400 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 U2AF2P26368 475 aaKnown RBP eCLIP16.69■□□□□ 0.263e-9■■■□□ 18.7
TMEM39A-205ENST00000468676 TRAPPC10P48553 1259 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 CCL23P55773 120 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 ADAM17P78536 824 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 ORC2Q13416 577 aaPredicted RBP16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 GRIK4Q16099 956 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 POTEBQ6S5H4 581 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 LMBR1Q8WVP7 490 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 SNX21Q969T3 373 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 IL23AQ9NPF7 189 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 TRPC6Q9Y210 931 aa16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 MAFBQ9Y5Q3 323 aaPredicted RBP16.69■□□□□ 0.26
TMEM39A-205ENST00000468676 H3BQV1 296 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 TREHO43280 583 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 HBP1O60381 514 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 SELPP16109 830 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 ZNF200P98182 395 aaPredicted RBP16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 PPP2R5CQ13362 524 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 HIC1Q14526 733 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 PLCB4Q15147 1175 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 TAF2Q6P1X5 1199 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 PSRC1Q6PGN9 363 aaPredicted RBP16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 B3GNT9Q6UX72 402 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 CCDC60Q8IWA6 550 aaPredicted RBP16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 CKAP2LQ8IYA6 745 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 ATP8B4Q8TF62 1192 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 DHX38Q92620 1227 aaKnown RBP16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 INTS4Q96HW7 963 aaKnown RBP16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 FAM167AQ96KS9 214 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 WNT8AQ9H1J5 351 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 UNC45AQ9H3U1 944 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 NOL7Q9UMY1 257 aaKnown RBP16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 UMODL1Q5DID0 1318 aa16.68■□□□□ 0.26
TMEM39A-205ENST00000468676 MBLAC1A4D2B0 266 aaPredicted RBP16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 K7ELQ4 463 aaPredicted RBP16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 CHMP2AO43633 222 aa16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 NEMFO60524 1076 aa16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 IQCF3P0C7M6 154 aa16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 CKBP12277 381 aa16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 INSRRP14616 1297 aa16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 PDCP20941 246 aa16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 CALCRLQ16602 461 aa16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 TRIM71Q2Q1W2 868 aaKnown RBP16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 LARP1BQ659C4 914 aaKnown RBP16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 MIER3Q7Z3K6 550 aa16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 RSPH3Q86UC2 560 aa16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 BBXQ8WY36 941 aaPredicted RBP16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 HAS1Q92839 578 aa16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 GABBR1Q9UBS5 961 aa16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 TUBE1Q9UJT0 475 aa16.67■□□□□ 0.26
TMEM39A-205ENST00000468676 COL1A2P08123 1366 aa16.66■□□□□ 0.26
TMEM39A-205ENST00000468676 LRIT3Q3SXY7 679 aa16.66■□□□□ 0.26
TMEM39A-205ENST00000468676 ZNF484Q5JVG2 852 aa16.66■□□□□ 0.26
TMEM39A-205ENST00000468676 LRRC8DQ7L1W4 858 aa16.66■□□□□ 0.26
TMEM39A-205ENST00000468676 RPAINQ86UA6 219 aa16.66■□□□□ 0.26
TMEM39A-205ENST00000468676 GJA10Q969M2 543 aa16.66■□□□□ 0.26
TMEM39A-205ENST00000468676 SCLYQ96I15 445 aa16.66■□□□□ 0.26
TMEM39A-205ENST00000468676 MTIF3Q9H2K0 278 aaKnown RBP16.66■□□□□ 0.26
TMEM39A-205ENST00000468676 NRBP2Q9NSY0 501 aa16.66■□□□□ 0.26
TMEM39A-205ENST00000468676 PCDH10Q9P2E7 1040 aa16.66■□□□□ 0.26
TMEM39A-205ENST00000468676 CEP131Q9UPN4 1083 aa16.66■□□□□ 0.26
TMEM39A-205ENST00000468676 IGSF9BQ9UPX0 1349 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms