RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 GOLGA6L22H0YM25 854 aa16.42■□□□□ 0.22
COL27A1-203ENST00000468565 CAND2O75155 1236 aa16.42■□□□□ 0.22
COL27A1-203ENST00000468565 CIITAP33076 1130 aa16.42■□□□□ 0.22
COL27A1-203ENST00000468565 NEK4P51957 841 aa16.42■□□□□ 0.22
COL27A1-203ENST00000468565 ADAM17P78536 824 aa16.42■□□□□ 0.22
COL27A1-203ENST00000468565 SKOR2Q2VWA4 1001 aaPredicted RBP16.42■□□□□ 0.22
COL27A1-203ENST00000468565 GALNT17Q6IS24 598 aa16.42■□□□□ 0.22
COL27A1-203ENST00000468565 TRAF7Q6Q0C0 670 aa16.42■□□□□ 0.22
COL27A1-203ENST00000468565 DAGLBQ8NCG7 672 aa16.42■□□□□ 0.22
COL27A1-203ENST00000468565 SEMA6BQ9H3T3 888 aa16.42■□□□□ 0.22
COL27A1-203ENST00000468565 SETD4Q9NVD3 440 aa16.42■□□□□ 0.22
COL27A1-203ENST00000468565 PCDHA4Q9UN74 947 aa16.42■□□□□ 0.22
COL27A1-203ENST00000468565 SLC4A7Q9Y6M7 1214 aa16.42■□□□□ 0.22
COL27A1-203ENST00000468565 MICAL3Q7RTP6 2002 aa16.42■□□□□ 0.22
COL27A1-203ENST00000468565 TREHO43280 583 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 BAIAP3O94812 1187 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 CXCL10P02778 98 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 ACTR2P61160 394 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 GPNMBQ14956 572 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 ZNF618Q5T7W0 954 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 CLEC17AQ6ZS10 378 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 LMBR1Q8WVP7 490 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 GLG1Q92896 1179 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 GUCD1Q96NT3 240 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 PBX4Q9BYU1 374 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 FTOQ9C0B1 505 aaKnown RBP eCLIP16.41■□□□□ 0.22
COL27A1-203ENST00000468565 TTYH1Q9H313 450 aaPredicted RBP16.41■□□□□ 0.22
COL27A1-203ENST00000468565 STXBP5LQ9Y2K9 1186 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 SIP14410 1827 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 ZBBXA8MT70 800 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 GRXCR1A8MXD5 290 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 ATG7O95352 703 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 RAB30Q15771 203 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 PCYT2Q99447 389 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 AZI2Q9H6S1 392 aa16.41■□□□□ 0.22
COL27A1-203ENST00000468565 MYO9BQ13459 2157 aa16.4■□□□□ 0.22
COL27A1-203ENST00000468565 USP11P51784 963 aa16.4■□□□□ 0.22
COL27A1-203ENST00000468565 PLPPR4Q7Z2D5 763 aa16.4■□□□□ 0.22
COL27A1-203ENST00000468565 TIFAQ96CG3 184 aa16.4■□□□□ 0.22
COL27A1-203ENST00000468565 TBC1D22BQ9NU19 505 aa16.4■□□□□ 0.22
COL27A1-203ENST00000468565 M0R2N6 131 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 IPO5O00410 1097 aaKnown RBP16.39■□□□□ 0.21
COL27A1-203ENST00000468565 DHX15O43143 795 aaKnown RBP16.39■□□□□ 0.21
COL27A1-203ENST00000468565 NBNO60934 754 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 THPOP40225 353 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 PPFIA1Q13136 1202 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 CNKSR3Q6P9H4 555 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 BLIDQ8IZY5 108 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 FAM161BQ96MY7 647 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 SLC9A7Q96T83 725 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 ZNF577Q9BSK1 485 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 MSRAQ9UJ68 235 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 LOXHD1Q8IVV2 1947 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 IGKV6D-21A0A0A0MT36 114 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 RSPH10B2B2RC85 870 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 RSPH10BP0C881 870 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 PBX2P40425 430 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 NPY5RQ15761 445 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 GRIK4Q16099 956 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 PHOSPHO2Q8TCD6 241 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 LENG9Q96B70 501 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 AIFM3Q96NN9 605 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 SSUH2Q9Y2M2 353 aa16.39■□□□□ 0.21
COL27A1-203ENST00000468565 CDH23Q9H251 3354 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 CTDNEP1O95476 244 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 CCNE2O96020 404 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 ATP2A2P16615 1042 aaKnown RBP16.38■□□□□ 0.21
COL27A1-203ENST00000468565 XBP1P17861 261 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 MARK3P27448 753 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 SLC26A2P50443 739 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 STAT5BP51692 787 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 MBTPS1Q14703 1052 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 ME3Q16798 604 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 PRR16Q569H4 304 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 TAF2Q6P1X5 1199 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 ABHD15Q6UXT9 468 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 RPAINQ86UA6 219 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 GTF3C6Q969F1 213 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 EVPLQ92817 2033 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 COL6A3P12111 3177 aa16.38■□□□□ 0.21
COL27A1-203ENST00000468565 MBLAC1A4D2B0 266 aaPredicted RBP16.37■□□□□ 0.21
COL27A1-203ENST00000468565 RRN3P2A6NIE6 340 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 DDX39AO00148 427 aaKnown RBP16.37■□□□□ 0.21
COL27A1-203ENST00000468565 EDIL3O43854 480 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 ZNF746Q6NUN9 644 aaPredicted RBP16.37■□□□□ 0.21
COL27A1-203ENST00000468565 TBCKQ8TEA7 893 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 WASF1Q92558 559 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 PHF20Q9BVI0 1012 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 ZNF576Q9H609 170 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 PCDHA11Q9Y5I1 949 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 ABHD14A-ACY1A0A1B0GW23 586 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 GOLGA6L3A6NEY3 463 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 EFCAB14O75071 495 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 LARGE1O95461 756 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 KRT76Q01546 638 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 PLCB4Q15147 1175 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 FAM26DQ5JW98 314 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 FAM160B1Q5W0V3 765 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 MIS18BP1Q6P0N0 1132 aa16.37■□□□□ 0.21
COL27A1-203ENST00000468565 SMAP1Q8IYB5 467 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms