RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 LILRB5O75023 590 aa14.9□□□□□ -0.02
UBR4-210ENST00000466969 LRP3O75074 770 aa14.9□□□□□ -0.02
UBR4-210ENST00000466969 HOXC8P31273 242 aa14.9□□□□□ -0.02
UBR4-210ENST00000466969 RBM25P49756 843 aaKnown RBP14.9□□□□□ -0.02
UBR4-210ENST00000466969 RCSD1Q6JBY9 416 aa14.9□□□□□ -0.02
UBR4-210ENST00000466969 PJA1Q8NG27 643 aa14.9□□□□□ -0.02
UBR4-210ENST00000466969 MRPS27Q92552 414 aaKnown RBP14.9□□□□□ -0.02
UBR4-210ENST00000466969 BCO2Q9BYV7 579 aa14.9□□□□□ -0.02
UBR4-210ENST00000466969 EHMT1Q9H9B1 1298 aa14.9□□□□□ -0.02
UBR4-210ENST00000466969 ZNF287Q9HBT7 754 aa14.9□□□□□ -0.02
UBR4-210ENST00000466969 LRFN2Q9ULH4 789 aa14.9□□□□□ -0.02
UBR4-210ENST00000466969 BPTFQ12830 3046 aa14.89□□□□□ -0.03
UBR4-210ENST00000466969 CHRNA1P02708 482 aa14.89□□□□□ -0.03
UBR4-210ENST00000466969 GLULP15104 373 aa14.89□□□□□ -0.03
UBR4-210ENST00000466969 LPIN1Q14693 890 aa14.89□□□□□ -0.03
UBR4-210ENST00000466969 STXBP2Q15833 593 aa14.89□□□□□ -0.03
UBR4-210ENST00000466969 PRR23CQ6ZRP0 262 aa14.89□□□□□ -0.03
UBR4-210ENST00000466969 TMC7Q7Z402 723 aa14.89□□□□□ -0.03
UBR4-210ENST00000466969 C12orf76Q8N812 135 aaPredicted RBP14.89□□□□□ -0.03
UBR4-210ENST00000466969 API5Q9BZZ5 524 aaKnown RBP14.89□□□□□ -0.03
UBR4-210ENST00000466969 RANBP17Q9H2T7 1088 aaKnown RBP14.89□□□□□ -0.03
UBR4-210ENST00000466969 ARHGEF3Q9NR81 526 aa14.89□□□□□ -0.03
UBR4-210ENST00000466969 DZANK1Q9NVP4 752 aa14.89□□□□□ -0.03
UBR4-210ENST00000466969 MRVI1Q9Y6F6 885 aa14.89□□□□□ -0.03
UBR4-210ENST00000466969 ZBED9Q6R2W3 1325 aa14.89□□□□□ -0.03
UBR4-210ENST00000466969 DSPP15924 2871 aaKnown RBP14.88□□□□□ -0.03
UBR4-210ENST00000466969 H3BRB1 525 aa14.88□□□□□ -0.03
UBR4-210ENST00000466969 GNAI2P04899 355 aa14.88□□□□□ -0.03
UBR4-210ENST00000466969 SRFP11831 508 aa14.88□□□□□ -0.03
UBR4-210ENST00000466969 HOXD8P13378 290 aaPredicted RBP14.88□□□□□ -0.03
UBR4-210ENST00000466969 GATMP50440 423 aa14.88□□□□□ -0.03
UBR4-210ENST00000466969 SOWAHCQ53LP3 525 aaPredicted RBP14.88□□□□□ -0.03
UBR4-210ENST00000466969 RASGRP2Q7LDG7 609 aa14.88□□□□□ -0.03
UBR4-210ENST00000466969 CLEC4DQ8WXI8 215 aa14.88□□□□□ -0.03
UBR4-210ENST00000466969 EAF2Q96CJ1 260 aaPredicted RBP14.88□□□□□ -0.03
UBR4-210ENST00000466969 SPATA33Q96N06 139 aa14.88□□□□□ -0.03
UBR4-210ENST00000466969 FTHL17Q9BXU8 183 aa14.88□□□□□ -0.03
UBR4-210ENST00000466969 TUT1Q9H6E5 874 aaKnown RBP14.88□□□□□ -0.03
UBR4-210ENST00000466969 SEMA4GQ9NTN9 838 aa14.88□□□□□ -0.03
UBR4-210ENST00000466969 EIF4E1BA6NMX2 242 aaKnown RBP14.87□□□□□ -0.03
UBR4-210ENST00000466969 GDF9O60383 454 aa14.87□□□□□ -0.03
UBR4-210ENST00000466969 FOXD2O60548 495 aaPredicted RBP14.87□□□□□ -0.03
UBR4-210ENST00000466969 SURF6O75683 361 aaKnown RBP14.87□□□□□ -0.03
UBR4-210ENST00000466969 ALDH1L2Q3SY69 923 aa14.87□□□□□ -0.03
UBR4-210ENST00000466969 LAIR1Q6GTX8 287 aa14.87□□□□□ -0.03
UBR4-210ENST00000466969 DCLRE1AQ6PJP8 1040 aa14.87□□□□□ -0.03
UBR4-210ENST00000466969 COLGALT1Q8NBJ5 622 aa14.87□□□□□ -0.03
UBR4-210ENST00000466969 GPR152Q8TDT2 470 aa14.87□□□□□ -0.03
UBR4-210ENST00000466969 C16orf70Q9BSU1 422 aa14.87□□□□□ -0.03
UBR4-210ENST00000466969 FOXQ1Q9C009 403 aa14.87□□□□□ -0.03
UBR4-210ENST00000466969 SETD4Q9NVD3 440 aa14.87□□□□□ -0.03
UBR4-210ENST00000466969 PNMA2Q9UL42 364 aa14.87□□□□□ -0.03
UBR4-210ENST00000466969 WDFY3Q8IZQ1 3526 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 MINDY4BA8MYZ0 360 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 GOLIM4O00461 696 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 RETP07949 1114 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 TSPY3P0CV98 308 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 TSPY8P0CW00 308 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 SCG2P13521 617 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 IBSPP21815 317 aaPredicted RBP14.86□□□□□ -0.03
UBR4-210ENST00000466969 CA8P35219 290 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 PLCB3Q01970 1234 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 CSRP2Q16527 193 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 LPAL2Q16609 132 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 HSDL1Q3SXM5 330 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 KANK3Q6NY19 840 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 TSHZ1Q6ZSZ6 1077 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 TMEM87AQ8NBN3 555 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 RSAD2Q8WXG1 361 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 LINC01599Q8WXQ3 324 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 SHDQ96IW2 340 aa14.86□□□□□ -0.03
UBR4-210ENST00000466969 SORBS3O60504 671 aa14.85□□□□□ -0.03
UBR4-210ENST00000466969 CLASP2O75122 1294 aaKnown RBP14.85□□□□□ -0.03
UBR4-210ENST00000466969 LRRN2O75325 713 aa14.85□□□□□ -0.03
UBR4-210ENST00000466969 PRDM1O75626 825 aa14.85□□□□□ -0.03
UBR4-210ENST00000466969 KRT17Q04695 432 aa14.85□□□□□ -0.03
UBR4-210ENST00000466969 SMC1AQ14683 1233 aaKnown RBP14.85□□□□□ -0.03
UBR4-210ENST00000466969 SBK1Q52WX2 424 aa14.85□□□□□ -0.03
UBR4-210ENST00000466969 FBXO47Q5MNV8 452 aa14.85□□□□□ -0.03
UBR4-210ENST00000466969 TMC5Q6UXY8 1006 aa14.85□□□□□ -0.03
UBR4-210ENST00000466969 RSPH3Q86UC2 560 aa14.85□□□□□ -0.03
UBR4-210ENST00000466969 LURAP1LQ8IV03 231 aa14.85□□□□□ -0.03
UBR4-210ENST00000466969 SLC44A3Q8N4M1 653 aa14.85□□□□□ -0.03
UBR4-210ENST00000466969 NSUN6Q8TEA1 469 aaKnown RBP14.85□□□□□ -0.03
UBR4-210ENST00000466969 ZCCHC14Q8WYQ9 949 aaKnown RBP14.85□□□□□ -0.03
UBR4-210ENST00000466969 NOB1Q9ULX3 412 aaKnown RBP14.85□□□□□ -0.03
UBR4-210ENST00000466969 KIAA1217Q5T5P2 1943 aa14.85□□□□□ -0.03
UBR4-210ENST00000466969 LOC400499M0QZD8 3231 aa14.85□□□□□ -0.03
UBR4-210ENST00000466969 SPDYE4A6NLX3 237 aa14.84□□□□□ -0.03
UBR4-210ENST00000466969 TBKBP1A7MCY6 615 aa14.84□□□□□ -0.03
UBR4-210ENST00000466969 CYSRT1A8MQ03 144 aa14.84□□□□□ -0.03
UBR4-210ENST00000466969 LAG3P18627 525 aa14.84□□□□□ -0.03
UBR4-210ENST00000466969 ADD2P35612 726 aa14.84□□□□□ -0.03
UBR4-210ENST00000466969 ARHGAP4P98171 946 aa14.84□□□□□ -0.03
UBR4-210ENST00000466969 PTPN14Q15678 1187 aa14.84□□□□□ -0.03
UBR4-210ENST00000466969 CCDC96Q2M329 555 aa14.84□□□□□ -0.03
UBR4-210ENST00000466969 MYSM1Q5VVJ2 828 aa14.84□□□□□ -0.03
UBR4-210ENST00000466969 RTN4RL1Q86UN2 441 aaPredicted RBP14.84□□□□□ -0.03
UBR4-210ENST00000466969 MRPL43Q8N983 215 aaKnown RBP14.84□□□□□ -0.03
UBR4-210ENST00000466969 IWS1Q96ST2 819 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms