RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SERINC5Q86VE9 423 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 CCDC60Q8IWA6 550 aaPredicted RBP14.61□□□□□ -0.07
COL5A1-206ENST00000465877 SMAP1Q8IYB5 467 aaPredicted RBP14.61□□□□□ -0.07
COL5A1-206ENST00000465877 SLC5A5Q92911 643 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 ATP6V0A1Q93050 837 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 RNPEPQ9H4A4 650 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 DDX25Q9UHL0 483 aaKnown RBP14.61□□□□□ -0.07
COL5A1-206ENST00000465877 IGSF9BQ9UPX0 1349 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 IGKV6D-21A0A0A0MT36 114 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 TREHO43280 583 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 GAS7O60861 476 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 GNAT1P11488 350 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 CKBP12277 381 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 GCFC2P16383 781 aaKnown RBP14.6□□□□□ -0.07
COL5A1-206ENST00000465877 RFC2P35250 354 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 MCM2P49736 904 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 GUCY1B3Q02153 619 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 GRIK4Q16099 956 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 TRIM71Q2Q1W2 868 aaKnown RBP14.6□□□□□ -0.07
COL5A1-206ENST00000465877 FAM160B1Q5W0V3 765 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 MIS18BP1Q6P0N0 1132 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 ABHD15Q6UXT9 468 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 LRRC8DQ7L1W4 858 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 FAM184AQ8NB25 1140 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 RETREG2Q8NC44 543 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 ETNPPLQ8TBG4 499 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 TMX3Q96JJ7 454 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 C8orf76Q96K31 380 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 TEKT3Q9BXF9 490 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 SETD4Q9NVD3 440 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 TRPC6Q9Y210 931 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 NRCAMQ92823 1304 aa14.6□□□□□ -0.07
COL5A1-206ENST00000465877 MYH15Q9Y2K3 1946 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 WDR64B1ANS9 1081 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 BTBD18B2RXH4 712 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 BACH1O14867 736 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 CHMP2AO43633 222 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 CCNT1O60563 726 aaKnown RBP14.59□□□□□ -0.07
COL5A1-206ENST00000465877 PFKMP08237 780 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 IQCF3P0C7M6 154 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 SELPP16109 830 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 SLC26A2P50443 739 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 STAT5BP51692 787 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 ADAM17P78536 824 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 PLCB4Q15147 1175 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 TMEM240Q5SV17 173 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 PPP4R3AQ6IN85 833 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 C16orf59Q7L2K0 433 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 PLPPR4Q7Z2D5 763 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 POTEDQ86YR6 584 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 GJA10Q969M2 543 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 VWCEQ96DN2 955 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 LRCH3Q96II8 777 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 RIT2Q99578 217 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 NAP1L4Q99733 375 aaKnown RBP14.59□□□□□ -0.07
COL5A1-206ENST00000465877 UNC45AQ9H3U1 944 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 ZNF302Q9NR11 478 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 TUBE1Q9UJT0 475 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 CHD9Q3L8U1 2897 aa14.59□□□□□ -0.07
COL5A1-206ENST00000465877 PSMD10O75832 226 aa14.58□□□□□ -0.08
COL5A1-206ENST00000465877 SAFBQ15424 915 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL5A1-206ENST00000465877 ZNF365Q70YC5 407 aa14.58□□□□□ -0.08
COL5A1-206ENST00000465877 DEFB128Q7Z7B8 93 aa14.58□□□□□ -0.08
COL5A1-206ENST00000465877 KCNMB3Q9NPA1 279 aa14.58□□□□□ -0.08
COL5A1-206ENST00000465877 SAMM50Q9Y512 469 aa14.58□□□□□ -0.08
COL5A1-206ENST00000465877 POTEB3A0JP26 581 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 CAND2O75155 1236 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 PSAPP07602 524 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 CTSHP09668 335 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 INSRRP14616 1297 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 SFNP31947 248 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 THPOP40225 353 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 JAK3P52333 1124 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 IGBP1P78318 339 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 ZNF618Q5T7W0 954 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 RASIP1Q5U651 963 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 PDXDC2PQ6P474 469 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 TRAF7Q6Q0C0 670 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 POTEBQ6S5H4 581 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 RPUSD2Q8IZ73 545 aaKnown RBP14.57□□□□□ -0.08
COL5A1-206ENST00000465877 FBXO18Q8NFZ0 1043 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 MTIF3Q9H2K0 278 aaKnown RBP14.57□□□□□ -0.08
COL5A1-206ENST00000465877 DISC1Q9NRI5 854 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 KIF3AQ9Y496 699 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 PCDHA10Q9Y5I2 948 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 COL1A2P08123 1366 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 EYSQ5T1H1 3165 aa14.57□□□□□ -0.08
COL5A1-206ENST00000465877 COL4A4P53420 1690 aaPredicted RBP14.56□□□□□ -0.08
COL5A1-206ENST00000465877 MBLAC1A4D2B0 266 aaPredicted RBP14.56□□□□□ -0.08
COL5A1-206ENST00000465877 SLC34A2O95436 690 aa14.56□□□□□ -0.08
COL5A1-206ENST00000465877 PARNO95453 639 aaKnown RBP14.56□□□□□ -0.08
COL5A1-206ENST00000465877 MBTPS1Q14703 1052 aa14.56□□□□□ -0.08
COL5A1-206ENST00000465877 MARCH8Q5T0T0 291 aa14.56□□□□□ -0.08
COL5A1-206ENST00000465877 SWSAP1Q6NVH7 229 aa14.56□□□□□ -0.08
COL5A1-206ENST00000465877 TAF2Q6P1X5 1199 aa14.56□□□□□ -0.08
COL5A1-206ENST00000465877 B3GNT9Q6UX72 402 aa14.56□□□□□ -0.08
COL5A1-206ENST00000465877 RUFY4Q6ZNE9 571 aa14.56□□□□□ -0.08
COL5A1-206ENST00000465877 OTOP2Q7RTS6 562 aa14.56□□□□□ -0.08
COL5A1-206ENST00000465877 RDM1Q8NG50 284 aa14.56□□□□□ -0.08
COL5A1-206ENST00000465877 ATP8B4Q8TF62 1192 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms