RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 MCM9Q9NXL9 1143 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 ESYT2A0FGR8 921 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 SSBP05455 408 aaKnown RBP eCLIP21.56■■□□□ 1.04
SDF4-205ENST00000465727 ZBTB48P10074 688 aaPredicted RBP21.56■■□□□ 1.04
SDF4-205ENST00000465727 SCP2P22307 547 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 SLC8A3P57103 927 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 EVA1CP58658 441 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 ITIH4Q14624 930 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 C12orf60Q5U649 245 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 XPO6Q96QU8 1125 aaKnown RBP21.56■■□□□ 1.04
SDF4-205ENST00000465727 GANQ9H2C0 597 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 BSDC1Q9NW68 430 aaPredicted RBP21.56■■□□□ 1.04
SDF4-205ENST00000465727 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.56■■□□□ 1.04
SDF4-205ENST00000465727 UTP11Q9Y3A2 253 aaKnown RBP21.56■■□□□ 1.04
SDF4-205ENST00000465727 CCT8L1PA6NM43 557 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 ASAP2O43150 1006 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 SMARCA1P28370 1054 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 ELF3P78545 371 aaPredicted RBP21.56■■□□□ 1.04
SDF4-205ENST00000465727 RIPK1Q13546 671 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 TMEM119Q4V9L6 283 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 KRT79Q5XKE5 535 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 FMNL3Q8IVF7 1028 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 SYCE1Q8N0S2 351 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 HOOK2Q96ED9 719 aa21.56■■□□□ 1.04
SDF4-205ENST00000465727 A0A0A6YYK5 440 aaPredicted RBP21.55■■□□□ 1.04
SDF4-205ENST00000465727 KLRF2D3W0D1 207 aa21.55■■□□□ 1.04
SDF4-205ENST00000465727 DAPK3O43293 454 aa21.55■■□□□ 1.04
SDF4-205ENST00000465727 PPFIA2O75334 1257 aa21.55■■□□□ 1.04
SDF4-205ENST00000465727 ATP6V1G2O95670 118 aa21.55■■□□□ 1.04
SDF4-205ENST00000465727 COASYQ13057 564 aa21.55■■□□□ 1.04
SDF4-205ENST00000465727 FBXO33Q7Z6M2 555 aa21.55■■□□□ 1.04
SDF4-205ENST00000465727 REXO1Q8N1G1 1221 aaKnown RBP21.55■■□□□ 1.04
SDF4-205ENST00000465727 METTL13Q8N6R0 699 aa21.55■■□□□ 1.04
SDF4-205ENST00000465727 CCHCR1Q8TD31 782 aa21.55■■□□□ 1.04
SDF4-205ENST00000465727 AP1M1Q9BXS5 423 aa21.55■■□□□ 1.04
SDF4-205ENST00000465727 DDX47Q9H0S4 455 aaKnown RBP21.55■■□□□ 1.04
SDF4-205ENST00000465727 SUCLA2Q9P2R7 463 aaPredicted RBP21.55■■□□□ 1.04
SDF4-205ENST00000465727 ABCA3Q99758 1704 aa21.55■■□□□ 1.04
SDF4-205ENST00000465727 PHF20L1A8MW92 1017 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 TSPY3P0CV98 308 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 TSPY8P0CW00 308 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 EPS15P42566 896 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 ARID5AQ03989 594 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 DHX9Q08211 1270 aaKnown RBP21.54■■□□□ 1.04
SDF4-205ENST00000465727 SLFN11Q7Z7L1 901 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 F8W031 263 aaPredicted RBP21.54■■□□□ 1.04
SDF4-205ENST00000465727 CLNS1AP54105 237 aaKnown RBP21.54■■□□□ 1.04
SDF4-205ENST00000465727 LRRC41Q15345 812 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 PPP2R5EQ16537 467 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 FAM26FQ5R3K3 315 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 SNX29Q8TEQ0 813 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 CUL5Q93034 780 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 RSRC1Q96IZ7 334 aaKnown RBP21.54■■□□□ 1.04
SDF4-205ENST00000465727 RAB17Q9H0T7 212 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 MKNK2Q9HBH9 465 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 NOD2Q9HC29 1040 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 SEC63Q9UGP8 760 aaKnown RBP21.54■■□□□ 1.04
SDF4-205ENST00000465727 TTC7AQ9ULT0 858 aaPredicted RBP21.54■■□□□ 1.04
SDF4-205ENST00000465727 SLC12A4Q9UP95 1085 aa21.54■■□□□ 1.04
SDF4-205ENST00000465727 COL4A1P02462 1669 aa21.53■■□□□ 1.04
SDF4-205ENST00000465727 CFAP73A6NFT4 308 aa21.53■■□□□ 1.04
SDF4-205ENST00000465727 hCG_1984214I3L0E3 225 aa21.53■■□□□ 1.04
SDF4-205ENST00000465727 FLOT1O75955 427 aa21.53■■□□□ 1.04
SDF4-205ENST00000465727 FLT3P36888 993 aa21.53■■□□□ 1.04
SDF4-205ENST00000465727 NPEPPSP55786 919 aa21.53■■□□□ 1.04
SDF4-205ENST00000465727 PTK2Q05397 1052 aa21.53■■□□□ 1.04
SDF4-205ENST00000465727 ZC3H3Q8IXZ2 948 aaKnown RBP21.53■■□□□ 1.04
SDF4-205ENST00000465727 ZNF713Q8N859 430 aaPredicted RBP21.53■■□□□ 1.04
SDF4-205ENST00000465727 TPCN2Q8NHX9 752 aa21.53■■□□□ 1.04
SDF4-205ENST00000465727 DNAJC19Q96DA6 116 aa21.53■■□□□ 1.04
SDF4-205ENST00000465727 AMACRQ9UHK6 382 aa21.53■■□□□ 1.04
SDF4-205ENST00000465727 INTUQ9ULD6 942 aa21.53■■□□□ 1.04
SDF4-205ENST00000465727 CTNND1O60716 968 aaKnown RBP21.52■■□□□ 1.04
SDF4-205ENST00000465727 NUDT17P0C025 328 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 USP17L8P0C7I0 530 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 E2F5Q15329 346 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 PPP4R3CPQ6ZMV5 832 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 PEX26Q7Z412 305 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 IRF2BP2Q7Z5L9 587 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 MAB21L3Q8N8X9 362 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 TBC1D22AQ8WUA7 517 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 PGM2Q96G03 612 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 ZNF317Q96PQ6 595 aaPredicted RBP21.52■■□□□ 1.04
SDF4-205ENST00000465727 TMEM47Q9BQJ4 181 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 TXLNGYQ9BZA5 131 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 BATF3Q9NR55 127 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 BMP2KQ9NSY1 1161 aaPredicted RBP21.52■■□□□ 1.04
SDF4-205ENST00000465727 NAGPAQ9UK23 515 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 DCDC2CA8MYV0 355 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 GBP2P32456 591 aaPredicted RBP21.52■■□□□ 1.04
SDF4-205ENST00000465727 PRKCIP41743 596 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 SLMAPQ14BN4 828 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 CROCCP2Q86T23 111 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 GLIS3Q8NEA6 775 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 FMO2Q99518 471 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 EBF2Q9HAK2 575 aa21.52■■□□□ 1.04
SDF4-205ENST00000465727 CAMTA2O94983 1202 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 HIBCHQ6NVY1 386 aaPredicted RBP21.51■■□□□ 1.03
SDF4-205ENST00000465727 ALKBH5Q6P6C2 394 aaKnown RBP21.51■■□□□ 1.03
SDF4-205ENST00000465727 ZNF571Q7Z3V5 609 aaPredicted RBP21.51■■□□□ 1.03
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