RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 NOC4LQ9BVI4 516 aaKnown RBP22.94■■□□□ 1.26
SKA3-205ENST00000465471 PRO3102Q9H379 93 aa22.94■■□□□ 1.26
SKA3-205ENST00000465471 DISC1Q9NRI5 854 aa22.94■■□□□ 1.26
SKA3-205ENST00000465471 MAFBQ9Y5Q3 323 aaPredicted RBP22.94■■□□□ 1.26
SKA3-205ENST00000465471 TIMP1P01033 207 aa22.93■■□□□ 1.26
SKA3-205ENST00000465471 PSAPP07602 524 aa22.93■■□□□ 1.26
SKA3-205ENST00000465471 PLCB4Q15147 1175 aa22.93■■□□□ 1.26
SKA3-205ENST00000465471 FAM160B1Q5W0V3 765 aa22.93■■□□□ 1.26
SKA3-205ENST00000465471 GDF15Q99988 308 aa22.93■■□□□ 1.26
SKA3-205ENST00000465471 TMEM60Q9H2L4 133 aa22.93■■□□□ 1.26
SKA3-205ENST00000465471 ZNF302Q9NR11 478 aa22.93■■□□□ 1.26
SKA3-205ENST00000465471 NOL7Q9UMY1 257 aaKnown RBP22.93■■□□□ 1.26
SKA3-205ENST00000465471 TANC1Q9C0D5 1861 aa22.93■■□□□ 1.26
SKA3-205ENST00000465471 NRCAMQ92823 1304 aa22.92■■□□□ 1.26
SKA3-205ENST00000465471 C17orf102A2RUQ5 167 aa22.92■■□□□ 1.26
SKA3-205ENST00000465471 BACH1O14867 736 aa22.92■■□□□ 1.26
SKA3-205ENST00000465471 CYP2C9P11712 490 aa22.92■■□□□ 1.26
SKA3-205ENST00000465471 ATP4AP20648 1035 aa22.92■■□□□ 1.26
SKA3-205ENST00000465471 SYT1P21579 422 aa22.92■■□□□ 1.26
SKA3-205ENST00000465471 MARK3P27448 753 aa22.92■■□□□ 1.26
SKA3-205ENST00000465471 MAGEA10P43363 369 aaPredicted RBP22.92■■□□□ 1.26
SKA3-205ENST00000465471 RBL2Q08999 1139 aa22.92■■□□□ 1.26
SKA3-205ENST00000465471 CALCRLQ16602 461 aa22.92■■□□□ 1.26
SKA3-205ENST00000465471 MCTP1Q6DN14 999 aa22.92■■□□□ 1.26
SKA3-205ENST00000465471 SWSAP1Q6NVH7 229 aa22.92■■□□□ 1.26
SKA3-205ENST00000465471 DHX38Q92620 1227 aaKnown RBP22.92■■□□□ 1.26
SKA3-205ENST00000465471 FOXD4L1Q9NU39 408 aa22.92■■□□□ 1.26
SKA3-205ENST00000465471 KAT6AQ92794 2004 aa22.92■■□□□ 1.26
SKA3-205ENST00000465471 RANBP2P49792 3224 aaKnown RBP22.92■■□□□ 1.26
SKA3-205ENST00000465471 EML1O00423 815 aa22.91■■□□□ 1.26
SKA3-205ENST00000465471 CHMP2AO43633 222 aa22.91■■□□□ 1.26
SKA3-205ENST00000465471 RAG1P15918 1043 aa22.91■■□□□ 1.26
SKA3-205ENST00000465471 ATP2B1P20020 1258 aa22.91■■□□□ 1.26
SKA3-205ENST00000465471 MCM7P33993 719 aa22.91■■□□□ 1.26
SKA3-205ENST00000465471 ZNF200P98182 395 aaPredicted RBP22.91■■□□□ 1.26
SKA3-205ENST00000465471 MIER3Q7Z3K6 550 aa22.91■■□□□ 1.26
SKA3-205ENST00000465471 SERINC5Q86VE9 423 aa22.91■■□□□ 1.26
SKA3-205ENST00000465471 LMBR1Q8WVP7 490 aa22.91■■□□□ 1.26
SKA3-205ENST00000465471 HIPK3Q9H422 1215 aa22.91■■□□□ 1.26
SKA3-205ENST00000465471 SETD4Q9NVD3 440 aa22.91■■□□□ 1.26
SKA3-205ENST00000465471 SAMM50Q9Y512 469 aa22.91■■□□□ 1.26
SKA3-205ENST00000465471 UMODL1Q5DID0 1318 aa22.9■■□□□ 1.26
SKA3-205ENST00000465471 PITPNM1O00562 1244 aa22.9■■□□□ 1.26
SKA3-205ENST00000465471 BAG4O95429 457 aaKnown RBP22.9■■□□□ 1.26
SKA3-205ENST00000465471 PPFIA1Q13136 1202 aa22.9■■□□□ 1.26
SKA3-205ENST00000465471 PTK7Q13308 1070 aa22.9■■□□□ 1.26
SKA3-205ENST00000465471 NBR1Q14596 966 aa22.9■■□□□ 1.26
SKA3-205ENST00000465471 ZNF174Q15697 407 aa22.9■■□□□ 1.26
SKA3-205ENST00000465471 TRIM71Q2Q1W2 868 aaKnown RBP22.9■■□□□ 1.26
SKA3-205ENST00000465471 RILPL1Q5EBL4 403 aa22.9■■□□□ 1.26
SKA3-205ENST00000465471 PDXDC2PQ6P474 469 aa22.9■■□□□ 1.26
SKA3-205ENST00000465471 C4orf32Q8N8J7 132 aa22.9■■□□□ 1.26
SKA3-205ENST00000465471 ATP8B4Q8TF62 1192 aa22.9■■□□□ 1.26
SKA3-205ENST00000465471 BADQ92934 168 aa22.9■■□□□ 1.26
SKA3-205ENST00000465471 GABBR1Q9UBS5 961 aa22.9■■□□□ 1.26
SKA3-205ENST00000465471 POTEB3A0JP26 581 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 MBLAC1A4D2B0 266 aaPredicted RBP22.89■■□□□ 1.25
SKA3-205ENST00000465471 ZNF862O60290 1169 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 GNAT1P11488 350 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 GRIK4Q16099 956 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 UGCGQ16739 394 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 MARCH8Q5T0T0 291 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 MFSD5Q6N075 450 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 POTEBQ6S5H4 581 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 BRAPQ7Z569 592 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 ATP6V0A1Q93050 837 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 WNT8BQ93098 351 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 PPP1R12CQ9BZL4 782 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 WNT8AQ9H1J5 351 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.89■■□□□ 1.25
SKA3-205ENST00000465471 MTMR6Q9Y217 621 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 NOD1Q9Y239 953 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 PCDHB6Q9Y5E3 794 aa22.89■■□□□ 1.25
SKA3-205ENST00000465471 VPS37CA5D8V6 355 aaPredicted RBP22.88■■□□□ 1.25
SKA3-205ENST00000465471 TREHO43280 583 aa22.88■■□□□ 1.25
SKA3-205ENST00000465471 OR52Z1P0C646 297 aa22.88■■□□□ 1.25
SKA3-205ENST00000465471 INSRRP14616 1297 aa22.88■■□□□ 1.25
SKA3-205ENST00000465471 CYP2C18P33260 490 aa22.88■■□□□ 1.25
SKA3-205ENST00000465471 BMP8BP34820 402 aa22.88■■□□□ 1.25
SKA3-205ENST00000465471 MDM2Q00987 491 aaPredicted RBP22.88■■□□□ 1.25
SKA3-205ENST00000465471 CAGE1Q8TC20 777 aa22.88■■□□□ 1.25
SKA3-205ENST00000465471 TTC12Q9H892 705 aaPredicted RBP22.88■■□□□ 1.25
SKA3-205ENST00000465471 PCDHA12Q9UN75 941 aa22.88■■□□□ 1.25
SKA3-205ENST00000465471 TRPC6Q9Y210 931 aa22.88■■□□□ 1.25
SKA3-205ENST00000465471 COL1A2P08123 1366 aa22.88■■□□□ 1.25
SKA3-205ENST00000465471 RRN3P2A6NIE6 340 aa22.87■■□□□ 1.25
SKA3-205ENST00000465471 ZBTB42B2RXF5 422 aa22.87■■□□□ 1.25
SKA3-205ENST00000465471 MARCH6O60337 910 aa22.87■■□□□ 1.25
SKA3-205ENST00000465471 HBP1O60381 514 aa22.87■■□□□ 1.25
SKA3-205ENST00000465471 BBXQ8WY36 941 aaPredicted RBP22.87■■□□□ 1.25
SKA3-205ENST00000465471 TNPO1Q92973 898 aaKnown RBP22.87■■□□□ 1.25
SKA3-205ENST00000465471 LBHD1Q9BQE6 289 aaPredicted RBP22.87■■□□□ 1.25
SKA3-205ENST00000465471 STX6O43752 255 aa22.86■■□□□ 1.25
SKA3-205ENST00000465471 STBD1O95210 358 aa22.86■■□□□ 1.25
SKA3-205ENST00000465471 TXKP42681 527 aa22.86■■□□□ 1.25
SKA3-205ENST00000465471 PRKCEQ02156 737 aa22.86■■□□□ 1.25
SKA3-205ENST00000465471 RESTQ13127 1097 aa22.86■■□□□ 1.25
SKA3-205ENST00000465471 BFSP2Q13515 415 aa22.86■■□□□ 1.25
SKA3-205ENST00000465471 EPHA7Q15375 998 aa22.86■■□□□ 1.25
SKA3-205ENST00000465471 CHRDL2Q6WN34 429 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms