RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 C9orf50Q5SZB4 431 aa14.79□□□□□ -0.04
COL28A1-206ENST00000465339 PSRC1Q6PGN9 363 aaPredicted RBP14.79□□□□□ -0.04
COL28A1-206ENST00000465339 C16orf59Q7L2K0 433 aa14.79□□□□□ -0.04
COL28A1-206ENST00000465339 GLG1Q92896 1179 aa14.79□□□□□ -0.04
COL28A1-206ENST00000465339 CTAGE1Q96RT6 745 aa14.79□□□□□ -0.04
COL28A1-206ENST00000465339 RNPEPQ9H4A4 650 aa14.79□□□□□ -0.04
COL28A1-206ENST00000465339 BRMS1Q9HCU9 246 aa14.79□□□□□ -0.04
COL28A1-206ENST00000465339 EMSYQ7Z589 1322 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 NRCAMQ92823 1304 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 EDIL3O43854 480 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 PARNO95453 639 aaKnown RBP14.78□□□□□ -0.04
COL28A1-206ENST00000465339 FGBP02675 491 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 PFKMP08237 780 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 IQCF3P0C7M6 154 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 RBL2Q08999 1139 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 TRIM29Q14134 588 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 Q4G0T1 1027 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 TMEM240Q5SV17 173 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 MOXD1Q6UVY6 613 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 PLPPR4Q7Z2D5 763 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 TRIM50Q86XT4 487 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 CCDC83Q8IWF9 413 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 AFAP1L1Q8TED9 768 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 ATP6V0A1Q93050 837 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 LENG9Q96B70 501 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 TBC1D32Q96NH3 1257 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.78□□□□□ -0.04
COL28A1-206ENST00000465339 GJB4Q9NTQ9 266 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 TCEAL9Q9UHQ7 104 aa14.78□□□□□ -0.04
COL28A1-206ENST00000465339 MYH9P35579 1960 aaKnown RBP14.78□□□□□ -0.04
COL28A1-206ENST00000465339 JAK2O60674 1132 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 DTNBO60941 627 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 SELPP16109 830 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 KRT2P35908 639 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 SLC26A2P50443 739 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 STAT5BP51692 787 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 ZNF200P98182 395 aaPredicted RBP14.77□□□□□ -0.05
COL28A1-206ENST00000465339 KRT76Q01546 638 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 ST3GAL1Q11201 340 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 HIC1Q14526 733 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 ZNF746Q6NUN9 644 aaPredicted RBP14.77□□□□□ -0.05
COL28A1-206ENST00000465339 GPR153Q6NV75 609 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 MIS18BP1Q6P0N0 1132 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 ABHD15Q6UXT9 468 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 ZNF365Q70YC5 407 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 SERINC5Q86VE9 423 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 SCLYQ96I15 445 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 RNPC3Q96LT9 517 aaKnown RBP14.77□□□□□ -0.05
COL28A1-206ENST00000465339 RIT2Q99578 217 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 NAP1L4Q99733 375 aaKnown RBP14.77□□□□□ -0.05
COL28A1-206ENST00000465339 SETD4Q9NVD3 440 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 TANC1Q9C0D5 1861 aa14.77□□□□□ -0.05
COL28A1-206ENST00000465339 SCN5AQ14524 2016 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 WDR81Q562E7 1941 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 IGKV6D-21A0A0A0MT36 114 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 DDX39AO00148 427 aaKnown RBP14.76□□□□□ -0.05
COL28A1-206ENST00000465339 STK25O00506 426 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 SOX1O00570 391 aaPredicted RBP14.76□□□□□ -0.05
COL28A1-206ENST00000465339 MSH4O15457 936 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 CCNE2O96020 404 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 MMP1P03956 469 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 ACRP10323 421 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 CKBP12277 381 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 MCM2P49736 904 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 HMGN5P82970 282 aaKnown RBP14.76□□□□□ -0.05
COL28A1-206ENST00000465339 INF2Q27J81 1249 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 FAM160B1Q5W0V3 765 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 NEK8Q86SG6 692 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 SMAP1Q8IYB5 467 aaPredicted RBP14.76□□□□□ -0.05
COL28A1-206ENST00000465339 OXER1Q8TDS5 423 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 DHX38Q92620 1227 aaKnown RBP14.76□□□□□ -0.05
COL28A1-206ENST00000465339 SLC5A5Q92911 643 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 MBOAT7Q96N66 472 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 PCYT2Q99447 389 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 BACH2Q9BYV9 841 aa14.76□□□□□ -0.05
COL28A1-206ENST00000465339 MTIF3Q9H2K0 278 aaKnown RBP14.76□□□□□ -0.05
COL28A1-206ENST00000465339 RRN3P2A6NIE6 340 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 TREHO43280 583 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 CAND2O75155 1236 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 GCFC2P16383 781 aaKnown RBP14.75□□□□□ -0.05
COL28A1-206ENST00000465339 MARK3P27448 753 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 ADAM17P78536 824 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 TRIM71Q2Q1W2 868 aaKnown RBP14.75□□□□□ -0.05
COL28A1-206ENST00000465339 RASIP1Q5U651 963 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 KRT40Q6A162 431 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 PPP4R3AQ6IN85 833 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 PIK3AP1Q6ZUJ8 805 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 LRRC8DQ7L1W4 858 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 LMBR1Q8WVP7 490 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 HERVK_113Q902F9 699 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 PCDHA10Q9Y5I2 948 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 STK24Q9Y6E0 443 aa14.75□□□□□ -0.05
COL28A1-206ENST00000465339 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.74□□□□□ -0.05
COL28A1-206ENST00000465339 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.74□□□□□ -0.05
COL28A1-206ENST00000465339 BACH1O14867 736 aa14.74□□□□□ -0.05
COL28A1-206ENST00000465339 GAS7O60861 476 aa14.74□□□□□ -0.05
COL28A1-206ENST00000465339 TDP2O95551 362 aa14.74□□□□□ -0.05
COL28A1-206ENST00000465339 PSAPP07602 524 aa14.74□□□□□ -0.05
COL28A1-206ENST00000465339 ACTN1P12814 892 aa14.74□□□□□ -0.05
COL28A1-206ENST00000465339 SFNP31947 248 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms