RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 SAMM50Q9Y512 469 aa13.84□□□□□ -0.19
XRN1-204ENST00000465074 NRCAMQ92823 1304 aa13.84□□□□□ -0.19
XRN1-204ENST00000465074 CCNE2O96020 404 aa13.83□□□□□ -0.2
XRN1-204ENST00000465074 INSRRP14616 1297 aa13.83□□□□□ -0.2
XRN1-204ENST00000465074 SETQ01105 290 aaPredicted RBP13.83□□□□□ -0.2
XRN1-204ENST00000465074 RAB30Q15771 203 aa13.83□□□□□ -0.2
XRN1-204ENST00000465074 FAM160B1Q5W0V3 765 aa13.83□□□□□ -0.2
XRN1-204ENST00000465074 SWSAP1Q6NVH7 229 aa13.83□□□□□ -0.2
XRN1-204ENST00000465074 FAM117BQ6P1L5 589 aa13.83□□□□□ -0.2
XRN1-204ENST00000465074 CNKSR3Q6P9H4 555 aa13.83□□□□□ -0.2
XRN1-204ENST00000465074 RUFY4Q6ZNE9 571 aa13.83□□□□□ -0.2
XRN1-204ENST00000465074 TMCO2Q7Z6W1 182 aaPredicted RBP13.83□□□□□ -0.2
XRN1-204ENST00000465074 SP7Q8TDD2 431 aaPredicted RBP13.83□□□□□ -0.2
XRN1-204ENST00000465074 TRAPPC12Q8WVT3 735 aa13.83□□□□□ -0.2
XRN1-204ENST00000465074 CRYGNQ8WXF5 182 aa13.83□□□□□ -0.2
XRN1-204ENST00000465074 PCYT2Q99447 389 aa13.83□□□□□ -0.2
XRN1-204ENST00000465074 ZBED2Q9BTP6 218 aa13.83□□□□□ -0.2
XRN1-204ENST00000465074 FAM49AQ9H0Q0 323 aaPredicted RBP13.83□□□□□ -0.2
XRN1-204ENST00000465074 SLC28A3Q9HAS3 691 aa13.83□□□□□ -0.2
XRN1-204ENST00000465074 CCDC194A0A1B0GVG4 234 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 CHMP2AO43633 222 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 LGR5O75473 907 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 PARNO95453 639 aaKnown RBP13.82□□□□□ -0.2
XRN1-204ENST00000465074 CTDNEP1O95476 244 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 IKBKEQ14164 716 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 MBTPS1Q14703 1052 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 GPNMBQ14956 572 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 GRIN2CQ14957 1233 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 PLCB4Q15147 1175 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 TCTN1Q2MV58 587 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 C8orf34Q49A92 452 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 MIS18BP1Q6P0N0 1132 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 PDXDC2PQ6P474 469 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 DNAJB3Q8WWF6 145 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 GJA10Q969M2 543 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 ZNF302Q9NR11 478 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 TBC1D22BQ9NU19 505 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 TUBE1Q9UJT0 475 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 STXBP5LQ9Y2K9 1186 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 YBX2Q9Y2T7 364 aaKnown RBP13.82□□□□□ -0.2
XRN1-204ENST00000465074 EMSYQ7Z589 1322 aa13.82□□□□□ -0.2
XRN1-204ENST00000465074 MYH9P35579 1960 aaKnown RBP13.82□□□□□ -0.2
XRN1-204ENST00000465074 POTEB3A0JP26 581 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 RRN3P2A6NIE6 340 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 DHX15O43143 795 aaKnown RBP13.81□□□□□ -0.2
XRN1-204ENST00000465074 GAS7O60861 476 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 TDP2O95551 362 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 HOXC8P31273 242 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 USP11P51784 963 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 RBL2Q08999 1139 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 TMEM62Q0P6H9 643 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 NONOQ15233 471 aaKnown RBP eCLIP13.81□□□□□ -0.2
XRN1-204ENST00000465074 INF2Q27J81 1249 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 PPP2R2DQ66LE6 453 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 GALNT17Q6IS24 598 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 TRAF7Q6Q0C0 670 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 POTEBQ6S5H4 581 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 ABHD15Q6UXT9 468 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 PLPPR4Q7Z2D5 763 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 RSPH3Q86UC2 560 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 DBF4BQ8NFT6 615 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 WASF1Q92558 559 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 TNPO1Q92973 898 aaKnown RBP13.81□□□□□ -0.2
XRN1-204ENST00000465074 GTF3C6Q969F1 213 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 C22orf23Q9BZE7 217 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 PRDM12Q9H4Q4 367 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 CERS4Q9HA82 394 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 STK36Q9NRP7 1315 aa13.81□□□□□ -0.2
XRN1-204ENST00000465074 KIF28PB7ZC32 967 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 MSH4O15457 936 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 TLL1O43897 1013 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 JAK2O60674 1132 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 BAIAP3O94812 1187 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 PSAPP07602 524 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 FOSL2P15408 326 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 CIITAP33076 1130 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 WDR5P61964 334 aaKnown RBP13.8□□□□□ -0.2
XRN1-204ENST00000465074 ADAM17P78536 824 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 DEFB103AP81534 67 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 KRT76Q01546 638 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 LETM2Q2VYF4 491 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 MARCH8Q5T0T0 291 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 LRCH2Q5VUJ6 765 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 KRT25Q7Z3Z0 450 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 HERC6Q8IVU3 1022 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 CCDC60Q8IWA6 550 aaPredicted RBP13.8□□□□□ -0.2
XRN1-204ENST00000465074 SLC9A7Q96T83 725 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 PHF20Q9BVI0 1012 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 OSBPL7Q9BZF2 842 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 GABBR1Q9UBS5 961 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 PCDHA11Q9Y5I1 949 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 PTPRSQ13332 1948 aa13.8□□□□□ -0.2
XRN1-204ENST00000465074 TMEM265A0A087WTH1 108 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 ABHD14A-ACY1A0A1B0GW23 586 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 MARCH6O60337 910 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 ATG7O95352 703 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 CXCL10P02778 98 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 CA3P07451 260 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 IGFBP4P22692 258 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 TRIM29Q14134 588 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms