RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 BRIP1Q9BX63 1249 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 SIRT5Q9NXA8 310 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 MBD1Q9UIS9 605 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-204ENST00000463622 ZNF214Q9UL59 606 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-204ENST00000463622 CNOT6Q9ULM6 557 aaKnown RBP4.78□□□□□ -1.64
SCFD1-204ENST00000463622 MYBBP1AQ9BQG0 1328 aaKnown RBP4.77□□□□□ -1.65
SCFD1-204ENST00000463622 WDR33Q9C0J8 1336 aaKnown RBP4.77□□□□□ -1.65
SCFD1-204ENST00000463622 TNRC6CQ9HCJ0 1690 aaKnown RBP4.77□□□□□ -1.65
SCFD1-204ENST00000463622 WTIPA6NIX2 430 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-204ENST00000463622 PPM1GO15355 546 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-204ENST00000463622 CBFA2T2O43439 604 aa4.77□□□□□ -1.65
SCFD1-204ENST00000463622 NASPP49321 788 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-204ENST00000463622 MTHFSP49914 203 aa4.77□□□□□ -1.65
SCFD1-204ENST00000463622 EIF6P56537 245 aaKnown RBP4.77□□□□□ -1.65
SCFD1-204ENST00000463622 CYP4F8P98187 520 aa4.77□□□□□ -1.65
SCFD1-204ENST00000463622 PPP2R5EQ16537 467 aa4.77□□□□□ -1.65
SCFD1-204ENST00000463622 ANKRD39Q53RE8 183 aa4.77□□□□□ -1.65
SCFD1-204ENST00000463622 DNAJC10Q8IXB1 793 aa4.77□□□□□ -1.65
SCFD1-204ENST00000463622 CNTROBQ8N137 903 aa4.77□□□□□ -1.65
SCFD1-204ENST00000463622 GPRASP2Q96D09 838 aa4.77□□□□□ -1.65
SCFD1-204ENST00000463622 FGD4Q96M96 766 aa4.77□□□□□ -1.65
SCFD1-204ENST00000463622 FCRL3Q96P31 734 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-204ENST00000463622 CNTD2Q9H8S5 307 aa4.77□□□□□ -1.65
SCFD1-204ENST00000463622 ARFGEF1Q9Y6D6 1849 aa4.77□□□□□ -1.65
SCFD1-204ENST00000463622 BRCA1P38398 1863 aaKnown RBP4.77□□□□□ -1.65
SCFD1-204ENST00000463622 RGPD2P0DJD1 1756 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 SEMA7AO75326 666 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 CD3EP07766 207 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 SOX9P48436 509 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 NCKAP1LP55160 1127 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 RAB3GAP1Q15042 981 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 RALBP1Q15311 655 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 TAOK3Q9H2K8 898 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 ACBD3Q9H3P7 528 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 KLHL14Q9P2G3 628 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 KCTD3Q9Y597 815 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 A0A1W2PQ45 241 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-204ENST00000463622 A0A1W2PQH9 124 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 A0A1W2PQY0 241 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 VAMP4O75379 141 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 MPOP05164 745 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 SRGNP10124 158 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 PI3P19957 117 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 EIF5P55010 431 aaKnown RBP4.76□□□□□ -1.65
SCFD1-204ENST00000463622 MVKQ03426 396 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 STYK1Q6J9G0 422 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 ZNF530Q6P9A1 599 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-204ENST00000463622 ADAT2Q7Z6V5 191 aaKnown RBP4.76□□□□□ -1.65
SCFD1-204ENST00000463622 PNMA8AQ86V59 439 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-204ENST00000463622 SIAH1Q8IUQ4 282 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 MCMBPQ9BTE3 642 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 SRRTQ9BXP5 876 aaKnown RBP4.76□□□□□ -1.65
SCFD1-204ENST00000463622 PRR13Q9NZ81 148 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 FHOD1Q9Y613 1164 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 ADAMTS20P59510 1910 aa4.76□□□□□ -1.65
SCFD1-204ENST00000463622 ZNF831Q5JPB2 1677 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 ITGB4P16144 1822 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 SBF1O95248 1867 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 A0A1W2PQ27 194 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 A0A1W2PQ64 194 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 A0A1W2PQC6 194 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 A0A1W2PQD8 194 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 KLRG2A4D1S0 409 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-204ENST00000463622 ITGA4P13612 1032 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 TACR1P25103 407 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 EPHX2P34913 555 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 MAP2K2P36507 400 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 GIPRP48546 466 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 ERVFRD-1P60508 538 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 TCEAL1Q15170 157 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 DPY19L1Q2PZI1 675 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 SOGA3Q5TF21 947 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 TMC6Q7Z403 805 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 JAMLQ86YT9 394 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 PNISRQ8TF01 805 aaKnown RBP4.75□□□□□ -1.65
SCFD1-204ENST00000463622 ZNF622Q969S3 477 aaKnown RBP eCLIP4.75□□□□□ -1.653e-6■□□□□ 8.1
SCFD1-204ENST00000463622 GPR101Q96P66 508 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-204ENST00000463622 HAUS7Q99871 368 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 HACL1Q9UJ83 578 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 ACSL6Q9UKU0 697 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 HCFC2Q9Y5Z7 792 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 PKD1L3Q7Z443 1732 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 CARMIL3Q8ND23 1372 aa4.75□□□□□ -1.65
SCFD1-204ENST00000463622 CCER2I3L3R5 266 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 FZD9O00144 591 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 FGF10O15520 208 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-204ENST00000463622 EPHX1P07099 455 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 IL13P35225 146 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 ARL4AP40617 200 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 ECE1P42892 770 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 CDR1P51861 262 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 YBX1P67809 324 aaKnown RBP4.74□□□□□ -1.65
SCFD1-204ENST00000463622 COL9A2Q14055 689 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-204ENST00000463622 VMACQ2NL98 169 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 CST9Q5W186 159 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 TBC1D9BQ66K14 1250 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 HEATR6Q6AI08 1181 aaKnown RBP4.74□□□□□ -1.65
SCFD1-204ENST00000463622 PRR5LQ6MZQ0 368 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 FAM169BQ8N8A8 192 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms