RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 MAD2L2Q9UI95 211 aa13.47□□□□□ -0.25
PCCB-203ENST00000462542 FRMPD4Q14CM0 1322 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 PNMA6FA0A0J9YX94 578 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 MBLAC1A4D2B0 266 aaPredicted RBP13.46□□□□□ -0.25
PCCB-203ENST00000462542 PROB1E7EW31 1015 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 SDSP20132 328 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 IMMTQ16891 758 aaKnown RBP13.46□□□□□ -0.25
PCCB-203ENST00000462542 PDE12Q6L8Q7 609 aaKnown RBP13.46□□□□□ -0.25
PCCB-203ENST00000462542 RUFY4Q6ZNE9 571 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 RBM23Q86U06 439 aaKnown RBP13.46□□□□□ -0.25
PCCB-203ENST00000462542 RTN4RL1Q86UN2 441 aaPredicted RBP13.46□□□□□ -0.25
PCCB-203ENST00000462542 NLRX1Q86UT6 975 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 TRIM50Q86XT4 487 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 MICAL1Q8TDZ2 1067 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 TNPO1Q92973 898 aaKnown RBP13.46□□□□□ -0.25
PCCB-203ENST00000462542 RILPL2Q969X0 211 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 RPGRIP1Q96KN7 1286 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 CDCA3Q99618 268 aaPredicted RBP13.46□□□□□ -0.25
PCCB-203ENST00000462542 RIOX1Q9H6W3 641 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 ERAP1Q9NZ08 941 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 CDY2AQ9Y6F7 541 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 ZDBF2Q9HCK1 2354 aa13.46□□□□□ -0.25
PCCB-203ENST00000462542 RRN3P2A6NIE6 340 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 CSPG5O95196 566 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 GLP2RO95838 553 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 TCF7P36402 384 aaPredicted RBP13.45□□□□□ -0.26
PCCB-203ENST00000462542 PPFIA1Q13136 1202 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 SEMA3FQ13275 785 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 GRIK4Q16099 956 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 PTPN21Q16825 1174 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 PCNX4Q63HM2 1172 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 HOMER1Q86YM7 354 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 ATP8B4Q8TF62 1192 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 DNAJB3Q8WWF6 145 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 SEPT1Q8WYJ6 367 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 SUSD6Q92537 303 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 CDHR1Q96JP9 859 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 PIGSQ96S52 555 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 AAASQ9NRG9 546 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 TUBE1Q9UJT0 475 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 BARX2Q9UMQ3 279 aaPredicted RBP13.45□□□□□ -0.26
PCCB-203ENST00000462542 SUPT16HQ9Y5B9 1047 aaKnown RBP13.45□□□□□ -0.26
PCCB-203ENST00000462542 PCDHB12Q9Y5F1 795 aa13.45□□□□□ -0.26
PCCB-203ENST00000462542 SRGAP2BP0DMP2 458 aa13.44□□□□□ -0.26
PCCB-203ENST00000462542 CD52P31358 61 aa13.44□□□□□ -0.26
PCCB-203ENST00000462542 VCPP55072 806 aaKnown RBP13.44□□□□□ -0.26
PCCB-203ENST00000462542 MRPS6P82932 125 aaKnown RBP13.44□□□□□ -0.26
PCCB-203ENST00000462542 SEC23AQ15436 765 aa13.44□□□□□ -0.26
PCCB-203ENST00000462542 TMEM184AQ6ZMB5 413 aa13.44□□□□□ -0.26
PCCB-203ENST00000462542 RIPOR3Q96MK2 946 aa13.44□□□□□ -0.26
PCCB-203ENST00000462542 NEK1Q96PY6 1258 aa13.44□□□□□ -0.26
PCCB-203ENST00000462542 DSCC1Q9BVC3 393 aa13.44□□□□□ -0.26
PCCB-203ENST00000462542 SMARCAD1Q9H4L7 1026 aa13.44□□□□□ -0.26
PCCB-203ENST00000462542 AGO3Q9H9G7 860 aaKnown RBP13.44□□□□□ -0.26
PCCB-203ENST00000462542 FAM86C1Q9NVL1 165 aa13.44□□□□□ -0.26
PCCB-203ENST00000462542 LRFN2Q9ULH4 789 aa13.44□□□□□ -0.26
PCCB-203ENST00000462542 KMT2EQ8IZD2 1858 aa13.44□□□□□ -0.26
PCCB-203ENST00000462542 CACNA1HO95180 2353 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 H0Y858 1186 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 M0QZ92 97 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 GALR2O43603 387 aaPredicted RBP13.43□□□□□ -0.26
PCCB-203ENST00000462542 SCG2P13521 617 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 PTPRZ1P23471 2315 aaPredicted RBP13.43□□□□□ -0.26
PCCB-203ENST00000462542 SP4Q02446 784 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 PAN2Q504Q3 1202 aaKnown RBP13.43□□□□□ -0.26
PCCB-203ENST00000462542 MARCH8Q5T0T0 291 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 NME8Q8N427 588 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 LINC01599Q8WXQ3 324 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 GLG1Q92896 1179 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 CUL5Q93034 780 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 TLR9Q9NR96 1032 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 MYO15AQ9UKN7 3530 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 PADI3Q9ULW8 664 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 SPTBN4Q9H254 2564 aa13.43□□□□□ -0.26
PCCB-203ENST00000462542 GSTTP1A0A1W2PQM5 241 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 HIP1O00291 1037 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 PIK3CDO00329 1044 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 PPFIA3O75145 1194 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 PAK2Q13177 524 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 GRM4Q14833 912 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 DUSP6Q16828 381 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 CWC27Q6UX04 472 aaKnown RBP13.42□□□□□ -0.26
PCCB-203ENST00000462542 ERMP1Q7Z2K6 904 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 ZBTB33Q86T24 672 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 UBALD2Q8IYN6 164 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 SMARCC2Q8TAQ2 1214 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 GPRASP2Q96D09 838 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 S1PR5Q9H228 398 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 NR2E1Q9Y466 385 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 TELO2Q9Y4R8 837 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 PCDHB7Q9Y5E2 793 aa13.42□□□□□ -0.26
PCCB-203ENST00000462542 PER2O15055 1255 aa13.41□□□□□ -0.26
PCCB-203ENST00000462542 MAFGO15525 162 aa13.41□□□□□ -0.26
PCCB-203ENST00000462542 CYTH3O43739 400 aa13.41□□□□□ -0.26
PCCB-203ENST00000462542 HOXB8P17481 243 aaPredicted RBP13.41□□□□□ -0.26
PCCB-203ENST00000462542 NBL1P41271 181 aa13.41□□□□□ -0.26
PCCB-203ENST00000462542 TRDNQ13061 729 aa13.41□□□□□ -0.26
PCCB-203ENST00000462542 SPOUT1Q5T280 376 aaKnown RBP13.41□□□□□ -0.26
PCCB-203ENST00000462542 RASGRP4Q8TDF6 673 aa13.41□□□□□ -0.26
PCCB-203ENST00000462542 CELF4Q9BZC1 486 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms