RNA–Protein interactions for RNA: ENST00000462112.1

SSR1-203, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4 BASIC

Gene SSR1, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-203ENST00000462112 FAM86B1E9PN63 330 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 DDX39AO00148 427 aaKnown RBP9.24□□□□□ -0.93
SSR1-203ENST00000462112 KIAA0355O15063 1070 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 SORBS3O60504 671 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 ATP9AO75110 1047 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 FAM86B2P0C5J1 330 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 ZNF286BP0CG31 522 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 ARP10275 920 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 GJB2P29033 226 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 FOSBP53539 338 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 ACTR2P61160 394 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 PSMC6P62333 389 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 BECN1Q14457 450 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 TMEM266Q2M3C6 531 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 TMEM63BQ5T3F8 832 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 MIER3Q7Z3K6 550 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 FAM126BQ8IXS8 530 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 EXOC8Q8IYI6 725 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 CRYGNQ8WXF5 182 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 ATP6V0A1Q93050 837 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 SNX21Q969T3 373 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 UBE2OQ9C0C9 1292 aaKnown RBP9.24□□□□□ -0.93
SSR1-203ENST00000462112 HIPK3Q9H422 1215 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 ZNF302Q9NR11 478 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 NRBP2Q9NSY0 501 aa9.24□□□□□ -0.93
SSR1-203ENST00000462112 IGLV3-22A0A075B6J6 115 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 M0QZ92 97 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 M0R2N6 131 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 HBP1O60381 514 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 NEMFO60524 1076 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 TIMP1P01033 207 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 PFKMP08237 780 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 ACTN1P12814 892 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 SYN1P17600 705 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 RFC2P35250 354 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 GUCY1B3Q02153 619 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 FPGSQ05932 587 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 FAAP100Q0VG06 881 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 SEMA3FQ13275 785 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 PTK7Q13308 1070 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 CALCRLQ16602 461 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 RILPL1Q5EBL4 403 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 TAF2Q6P1X5 1199 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 PDXDC2PQ6P474 469 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 NOSTRINQ8IVI9 506 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 ZNF710Q8N1W2 664 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 ERMNQ8TAM6 284 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 CYP2W1Q8TAV3 490 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 CCDC43Q96MW1 224 aaKnown RBP9.23□□□□□ -0.93
SSR1-203ENST00000462112 C16orf70Q9BSU1 422 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 PDLIM7Q9NR12 457 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 DISC1Q9NRI5 854 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 DAXXQ9UER7 740 aaPredicted RBP9.23□□□□□ -0.93
SSR1-203ENST00000462112 GTF2IRD1Q9UHL9 959 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 PCDHA12Q9UN75 941 aa9.23□□□□□ -0.93
SSR1-203ENST00000462112 POTEB3A0JP26 581 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 HAS3O00219 553 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 LAD1O00515 517 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 MSH4O15457 936 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 CAND2O75155 1236 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 LGR5O75473 907 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 ATG7O95352 703 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 BMP15O95972 392 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 CD4P01730 458 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 SMIM10L2AP0DMW4 78 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 SMIM10L2BP0DMW5 78 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 ATP2B1P20020 1258 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 TMOD1P28289 359 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 BMP8BP34820 402 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 IRX5P78411 483 aaPredicted RBP9.22□□□□□ -0.93
SSR1-203ENST00000462112 PPFIA1Q13136 1202 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 NR5A1Q13285 461 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 ZNF484Q5JVG2 852 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 MFSD5Q6N075 450 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 SWSAP1Q6NVH7 229 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 PSRC1Q6PGN9 363 aaPredicted RBP9.22□□□□□ -0.93
SSR1-203ENST00000462112 POTEBQ6S5H4 581 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 FAM43BQ6ZT52 329 aaPredicted RBP9.22□□□□□ -0.93
SSR1-203ENST00000462112 OTUD6AQ7L8S5 288 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 BRAPQ7Z569 592 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 PDCD7Q8N8D1 485 aaKnown RBP9.22□□□□□ -0.93
SSR1-203ENST00000462112 AFAP1L1Q8TED9 768 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 SLC5A5Q92911 643 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 MBOAT7Q96N66 472 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 JPH2Q9BR39 696 aaPredicted RBP9.22□□□□□ -0.93
SSR1-203ENST00000462112 HDAC6Q9UBN7 1215 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 KAT6AQ92794 2004 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 COL1A2P08123 1366 aa9.22□□□□□ -0.93
SSR1-203ENST00000462112 GSTTP1A0A1W2PQM5 241 aa9.21□□□□□ -0.94
SSR1-203ENST00000462112 VPS37CA5D8V6 355 aaPredicted RBP9.21□□□□□ -0.94
SSR1-203ENST00000462112 MAGEB2O15479 319 aa9.21□□□□□ -0.94
SSR1-203ENST00000462112 CHMP2AO43633 222 aa9.21□□□□□ -0.94
SSR1-203ENST00000462112 B4GALT4O60513 344 aa9.21□□□□□ -0.94
SSR1-203ENST00000462112 TDP2O95551 362 aa9.21□□□□□ -0.94
SSR1-203ENST00000462112 U2AF2P26368 475 aaKnown RBP eCLIP9.21□□□□□ -0.942e-7■■□□□ 13.1
SSR1-203ENST00000462112 DNM2P50570 870 aa9.21□□□□□ -0.94
SSR1-203ENST00000462112 MDM2Q00987 491 aaPredicted RBP9.21□□□□□ -0.94
SSR1-203ENST00000462112 ITGB3BPQ13352 177 aaPredicted RBP9.21□□□□□ -0.94
SSR1-203ENST00000462112 CAMK2BQ13554 666 aa9.21□□□□□ -0.94
SSR1-203ENST00000462112 CUL4AQ13619 759 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms