RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 NRCAMQ92823 1304 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 FAM205CA6NFA0 338 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 WDR64B1ANS9 1081 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 TREHO43280 583 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 CHMP2AO43633 222 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 SLC37A4O43826 429 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 BAG4O95429 457 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 ACRP10323 421 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 RFC2P35250 354 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 SLC26A2P50443 739 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 HIC1Q14526 733 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 SHHQ15465 462 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 SWSAP1Q6NVH7 229 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 PDXDC2PQ6P474 469 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 PSRC1Q6PGN9 363 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 CKAP2LQ8IYA6 745 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 FBXO18Q8NFZ0 1043 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 AFAP1L1Q8TED9 768 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 LMBR1Q8WVP7 490 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 DHX38Q92620 1227 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 GJA10Q969M2 543 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 CTAGE1Q96RT6 745 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 WNT8AQ9H1J5 351 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 PCDHA10Q9Y5I2 948 aa11.96□□□□□ -0.49
TRAPPC12-213ENST00000461577 WDR81Q562E7 1941 aa11.96□□□□□ -0.5
TRAPPC12-213ENST00000461577 TANC1Q9C0D5 1861 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 SCN5AQ14524 2016 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 IGKV6D-21A0A0A0MT36 114 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 POTEB3A0JP26 581 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 RRN3P2A6NIE6 340 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 PSMD10O75832 226 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 IQCF3P0C7M6 154 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 CKBP12277 381 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 SELPP16109 830 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 GJB2P29033 226 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 HOXC8P31273 242 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 SFNP31947 248 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 THPOP40225 353 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 JAK3P52333 1124 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 EPHB4P54760 987 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 IGBP1P78318 339 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 PLCB4Q15147 1175 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 GRIK4Q16099 956 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 C9orf50Q5SZB4 431 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 POTEBQ6S5H4 581 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 LRRC8DQ7L1W4 858 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 MIER3Q7Z3K6 550 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 DEFB128Q7Z7B8 93 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 SERINC5Q86VE9 423 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 CCDC60Q8IWA6 550 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 ETNPPLQ8TBG4 499 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 RNPC3Q96LT9 517 aaKnown RBP11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 FAM20AQ96MK3 541 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 FOXP1Q9H334 677 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 UNC45AQ9H3U1 944 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 DISC1Q9NRI5 854 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 GABBR1Q9UBS5 961 aa11.95□□□□□ -0.5
TRAPPC12-213ENST00000461577 H3BQV1 296 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 TBX3O15119 743 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 HBP1O60381 514 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 PARNO95453 639 aaKnown RBP11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 FGBP02675 491 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 PFKMP08237 780 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 INSRRP14616 1297 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 ATP2B1P20020 1258 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 RBL2Q08999 1139 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 TMEM240Q5SV17 173 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 ZNF365Q70YC5 407 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 SLFN12Q8IYM2 578 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 RDM1Q8NG50 284 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.94□□□□□ -0.51e-7■■□□□ 13.8
TRAPPC12-213ENST00000461577 FTOQ9C0B1 505 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 MTIF3Q9H2K0 278 aaKnown RBP11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 TUBE1Q9UJT0 475 aa11.94□□□□□ -0.5
TRAPPC12-213ENST00000461577 NEMFO60524 1076 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 CAND2O75155 1236 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 ACTN1P12814 892 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 ADAM17P78536 824 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 CALCRLQ16602 461 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 TRIM71Q2Q1W2 868 aaKnown RBP11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 LRIT3Q3SXY7 679 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 ZNF484Q5JVG2 852 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 ZNF618Q5T7W0 954 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 MCTP1Q6DN14 999 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 TAF2Q6P1X5 1199 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 TRMT1LQ7Z2T5 733 aaKnown RBP11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 RSPH3Q86UC2 560 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 ATP8B4Q8TF62 1192 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 BBXQ8WY36 941 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 WNT8BQ93098 351 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 FAM167AQ96KS9 214 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 KCNMB3Q9NPA1 279 aa11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 NOL7Q9UMY1 257 aaKnown RBP11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 MAFBQ9Y5Q3 323 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC12-213ENST00000461577 COL1A2P08123 1366 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 IGSF9BQ9UPX0 1349 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 RSPH10B2B2RC85 870 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 RPLP2P05387 115 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms