RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ZBBXA8MT70 800 aa25.5■■□□□ 1.67
TRAF4-207ENST00000461195 TRAF7Q6Q0C0 670 aa25.5■■□□□ 1.67
TRAF4-207ENST00000461195 ABHD15Q6UXT9 468 aa25.5■■□□□ 1.67
TRAF4-207ENST00000461195 TET1Q8NFU7 2136 aa25.5■■□□□ 1.67
TRAF4-207ENST00000461195 TNPO1Q92973 898 aaKnown RBP25.5■■□□□ 1.67
TRAF4-207ENST00000461195 GJB4Q9NTQ9 266 aa25.5■■□□□ 1.67
TRAF4-207ENST00000461195 SLC4A7Q9Y6M7 1214 aa25.5■■□□□ 1.67
TRAF4-207ENST00000461195 IGKV6D-21A0A0A0MT36 114 aa25.49■■□□□ 1.67
TRAF4-207ENST00000461195 CAND2O75155 1236 aa25.49■■□□□ 1.67
TRAF4-207ENST00000461195 SLC26A2P50443 739 aa25.49■■□□□ 1.67
TRAF4-207ENST00000461195 KRT76Q01546 638 aa25.49■■□□□ 1.67
TRAF4-207ENST00000461195 GPNMBQ14956 572 aa25.49■■□□□ 1.67
TRAF4-207ENST00000461195 GRIK4Q16099 956 aa25.49■■□□□ 1.67
TRAF4-207ENST00000461195 FAM160B1Q5W0V3 765 aa25.49■■□□□ 1.67
TRAF4-207ENST00000461195 ZNF746Q6NUN9 644 aaPredicted RBP25.49■■□□□ 1.67
TRAF4-207ENST00000461195 MIS18BP1Q6P0N0 1132 aa25.49■■□□□ 1.67
TRAF4-207ENST00000461195 UPF2Q9HAU5 1272 aaKnown RBP25.49■■□□□ 1.67
TRAF4-207ENST00000461195 CYP3A7-CYP3A51PA0A087WV96 503 aa25.48■■□□□ 1.67
TRAF4-207ENST00000461195 CCDC194A0A1B0GVG4 234 aa25.48■■□□□ 1.67
TRAF4-207ENST00000461195 GRXCR1A8MXD5 290 aa25.48■■□□□ 1.67
TRAF4-207ENST00000461195 RSPH10B2B2RC85 870 aa25.48■■□□□ 1.67
TRAF4-207ENST00000461195 BACH1O14867 736 aa25.48■■□□□ 1.67
TRAF4-207ENST00000461195 MSH4O15457 936 aa25.48■■□□□ 1.67
TRAF4-207ENST00000461195 JAK2O60674 1132 aa25.48■■□□□ 1.67
TRAF4-207ENST00000461195 NBNO60934 754 aa25.48■■□□□ 1.67
TRAF4-207ENST00000461195 CXCL10P02778 98 aa25.48■■□□□ 1.67
TRAF4-207ENST00000461195 RSPH10BP0C881 870 aa25.48■■□□□ 1.67
TRAF4-207ENST00000461195 CYP3A7P24462 503 aa25.48■■□□□ 1.67
TRAF4-207ENST00000461195 Q4G0T1 1027 aa25.48■■□□□ 1.67
TRAF4-207ENST00000461195 SMAP1Q8IYB5 467 aaPredicted RBP25.48■■□□□ 1.67
TRAF4-207ENST00000461195 TRPC6Q9Y210 931 aa25.48■■□□□ 1.67
TRAF4-207ENST00000461195 RRN3P2A6NIE6 340 aa25.47■■□□□ 1.67
TRAF4-207ENST00000461195 DNAJB2P25686 324 aa25.47■■□□□ 1.67
TRAF4-207ENST00000461195 ST3GAL1Q11201 340 aa25.47■■□□□ 1.67
TRAF4-207ENST00000461195 PLCB4Q15147 1175 aa25.47■■□□□ 1.67
TRAF4-207ENST00000461195 INF2Q27J81 1249 aa25.47■■□□□ 1.67
TRAF4-207ENST00000461195 MOXD1Q6UVY6 613 aa25.47■■□□□ 1.67
TRAF4-207ENST00000461195 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.47■■□□□ 1.675e-7■■■■■ 32.1
TRAF4-207ENST00000461195 ZSCAN31Q96LW9 406 aaPredicted RBP25.47■■□□□ 1.67
TRAF4-207ENST00000461195 TUBE1Q9UJT0 475 aa25.47■■□□□ 1.67
TRAF4-207ENST00000461195 TMEM265A0A087WTH1 108 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 MBLAC1A4D2B0 266 aaPredicted RBP25.46■■□□□ 1.67
TRAF4-207ENST00000461195 BAIAP3O94812 1187 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 TDP2O95551 362 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 INSRRP14616 1297 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 IGBP1P78318 339 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 MBTPS1Q14703 1052 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 TAF2Q6P1X5 1199 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 CNKSR3Q6P9H4 555 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 CCDC60Q8IWA6 550 aaPredicted RBP25.46■■□□□ 1.67
TRAF4-207ENST00000461195 OXER1Q8TDS5 423 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 SLC5A5Q92911 643 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 RIT2Q99578 217 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 PBX4Q9BYU1 374 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 BRMS1Q9HCU9 246 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 ZNF302Q9NR11 478 aa25.46■■□□□ 1.67
TRAF4-207ENST00000461195 MYH9P35579 1960 aaKnown RBP25.45■■□□□ 1.67
TRAF4-207ENST00000461195 GBF1Q92538 1859 aa25.45■■□□□ 1.67
TRAF4-207ENST00000461195 POTEB3A0JP26 581 aa25.45■■□□□ 1.66
TRAF4-207ENST00000461195 GAS7O60861 476 aa25.45■■□□□ 1.66
TRAF4-207ENST00000461195 KRT2P35908 639 aa25.45■■□□□ 1.66
TRAF4-207ENST00000461195 RABEP1Q15276 862 aa25.45■■□□□ 1.66
TRAF4-207ENST00000461195 MARCH8Q5T0T0 291 aa25.45■■□□□ 1.66
TRAF4-207ENST00000461195 SWSAP1Q6NVH7 229 aa25.45■■□□□ 1.66
TRAF4-207ENST00000461195 PDXDC2PQ6P474 469 aa25.45■■□□□ 1.66
TRAF4-207ENST00000461195 POTEBQ6S5H4 581 aa25.45■■□□□ 1.66
TRAF4-207ENST00000461195 CCDC83Q8IWF9 413 aa25.45■■□□□ 1.66
TRAF4-207ENST00000461195 MBOAT7Q96N66 472 aa25.45■■□□□ 1.66
TRAF4-207ENST00000461195 COL25A1Q9BXS0 654 aaPredicted RBP25.45■■□□□ 1.66
TRAF4-207ENST00000461195 SEMA6BQ9H3T3 888 aa25.45■■□□□ 1.66
TRAF4-207ENST00000461195 SH2B1Q9NRF2 756 aaPredicted RBP25.45■■□□□ 1.66
TRAF4-207ENST00000461195 PCDHA10Q9Y5I2 948 aa25.45■■□□□ 1.66
TRAF4-207ENST00000461195 PSAPP07602 524 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 CTSHP09668 335 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 ATP2A2P16615 1042 aaKnown RBP25.44■■□□□ 1.66
TRAF4-207ENST00000461195 PBX2P40425 430 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 TRIM29Q14134 588 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 RAB30Q15771 203 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 LETM2Q2VYF4 491 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 LRCH2Q5VUJ6 765 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 RUFY4Q6ZNE9 571 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 PIK3AP1Q6ZUJ8 805 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 NEK8Q86SG6 692 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 RPAINQ86UA6 219 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 RSPH3Q86UC2 560 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 TIFAQ96CG3 184 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 LLPHQ9BRT6 129 aaKnown RBP25.44■■□□□ 1.66
TRAF4-207ENST00000461195 TEKT3Q9BXF9 490 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 DDX25Q9UHL0 483 aaKnown RBP25.44■■□□□ 1.66
TRAF4-207ENST00000461195 MSRAQ9UJ68 235 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 SAMM50Q9Y512 469 aa25.44■■□□□ 1.66
TRAF4-207ENST00000461195 WDR81Q562E7 1941 aa25.43■■□□□ 1.66
TRAF4-207ENST00000461195 WDR64B1ANS9 1081 aa25.43■■□□□ 1.66
TRAF4-207ENST00000461195 HBP1O60381 514 aa25.43■■□□□ 1.66
TRAF4-207ENST00000461195 ATP8B4Q8TF62 1192 aa25.43■■□□□ 1.66
TRAF4-207ENST00000461195 SLC9A7Q96T83 725 aa25.43■■□□□ 1.66
TRAF4-207ENST00000461195 TTYH1Q9H313 450 aaPredicted RBP25.43■■□□□ 1.66
TRAF4-207ENST00000461195 EYSQ5T1H1 3165 aa25.43■■□□□ 1.66
TRAF4-207ENST00000461195 MMP1P03956 469 aa25.42■■□□□ 1.66
TRAF4-207ENST00000461195 FAM26DQ5JW98 314 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms