RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 C1orf186Q6ZWK4 172 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 USP50Q70EL3 339 aaPredicted RBP12.07□□□□□ -0.48
IFT88-204ENST00000461115 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.07□□□□□ -0.48
IFT88-204ENST00000461115 CNGA4Q8IV77 575 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 MB21D1Q8N884 522 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 CEP63Q96MT8 703 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 TRERF1Q96PN7 1200 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 BAG1Q99933 345 aaPredicted RBP12.07□□□□□ -0.48
IFT88-204ENST00000461115 PDCD2LQ9BRP1 358 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 ZNF577Q9BSK1 485 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 TEKT3Q9BXF9 490 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 TTYH3Q9C0H2 523 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 KCTD10Q9H3F6 313 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 OLFML3Q9NRN5 406 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 KCNH7Q9NS40 1196 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 HOXC10Q9NYD6 342 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 GAS7O60861 476 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 YBX3P16989 372 aaKnown RBP eCLIP12.06□□□□□ -0.48
IFT88-204ENST00000461115 GAP43P17677 238 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 GTF2F1P35269 517 aaKnown RBP eCLIP12.06□□□□□ -0.48
IFT88-204ENST00000461115 ZNF131P52739 623 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 RBL2Q08999 1139 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 NFIL3Q16649 462 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 IL31RAQ8NI17 732 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 SCFD1Q8WVM8 642 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 HPS3Q969F9 1004 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 NACC1Q96RE7 527 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 TUBGCP2Q9BSJ2 902 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 UNC45AQ9H3U1 944 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 AGO4Q9HCK5 861 aaKnown RBP12.06□□□□□ -0.48
IFT88-204ENST00000461115 PXMP2Q9NR77 195 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 TBC1D22BQ9NU19 505 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 TAB2Q9NYJ8 693 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 RNF181Q9P0P0 153 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 SEL1LQ9UBV2 794 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 TRAF3IP3Q9Y228 551 aa12.06□□□□□ -0.48
IFT88-204ENST00000461115 SPDYE16A6NNV3 312 aaPredicted RBP12.05□□□□□ -0.48
IFT88-204ENST00000461115 USP27XA6NNY8 438 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 IRF6O14896 467 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 COBLO75128 1261 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 STAM2O75886 525 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 IDEP14735 1019 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 FKBP3Q00688 224 aaKnown RBP12.05□□□□□ -0.48
IFT88-204ENST00000461115 PPATQ06203 517 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 VGLL4Q14135 290 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 TMEM132BQ14DG7 1078 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 PRAMEF18Q5VWM3 479 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 RINT1Q6NUQ1 792 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 RNF207Q6ZRF8 634 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 VSIG10LQ86VR7 867 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 PPFIBP1Q86W92 1011 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 CPXCR1Q8N123 301 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 RDM1Q8NG50 284 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 TMEM174Q8WUU8 243 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 DCPSQ96C86 337 aaKnown RBP12.05□□□□□ -0.48
IFT88-204ENST00000461115 GPRASP2Q96D09 838 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 WNK4Q96J92 1243 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 CNOT6LQ96LI5 555 aaKnown RBP12.05□□□□□ -0.48
IFT88-204ENST00000461115 TAAR1Q96RJ0 339 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 DNAJC7Q99615 494 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 TSG101Q99816 390 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 SENP7Q9BQF6 1050 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 REEP2Q9BRK0 252 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 NUP58Q9BVL2 599 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 TEX13BQ9BXU2 312 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 VPS16Q9H269 839 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 RNF146Q9NTX7 359 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 RGL1Q9NZL6 768 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 TMOD4Q9NZQ9 345 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 MAGEC2Q9UBF1 373 aaPredicted RBP12.05□□□□□ -0.48
IFT88-204ENST00000461115 RIPK3Q9Y572 518 aa12.05□□□□□ -0.48
IFT88-204ENST00000461115 A0A1W2PQJ5 194 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 GOLGA6L9A6NEM1 432 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 UNCXA6NJT0 531 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 CXCL11O14625 94 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 GNA14O95837 355 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 TPM2P07951 284 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 PRKCSHP14314 528 aaPredicted RBP12.04□□□□□ -0.48
IFT88-204ENST00000461115 GUCY2CP25092 1073 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 FXR1P51114 621 aaKnown RBP eCLIP12.04□□□□□ -0.48
IFT88-204ENST00000461115 ADKP55263 362 aaKnown RBP12.04□□□□□ -0.48
IFT88-204ENST00000461115 PABPC4Q13310 644 aaKnown RBP eCLIP12.04□□□□□ -0.48
IFT88-204ENST00000461115 ITGB3BPQ13352 177 aaPredicted RBP12.04□□□□□ -0.48
IFT88-204ENST00000461115 CEP135Q66GS9 1140 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 SLC30A10Q6XR72 485 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 REXO1L1PQ8IX06 675 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 PROCA1Q8NCQ7 364 aaPredicted RBP12.04□□□□□ -0.48
IFT88-204ENST00000461115 GLIS3Q8NEA6 775 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 MYRIPQ8NFW9 859 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 DYDC2Q96IM9 177 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 PPP1R13BQ96KQ4 1090 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 INPP4AQ96PE3 977 aaPredicted RBP12.04□□□□□ -0.48
IFT88-204ENST00000461115 FIZ1Q96SL8 496 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 BHMT2Q9H2M3 363 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 DBR1Q9UK59 544 aaKnown RBP12.04□□□□□ -0.48
IFT88-204ENST00000461115 ODF2LQ9ULJ1 636 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 CAPN11Q9UMQ6 739 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 KCNH4Q9UQ05 1017 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 PAXBP1Q9Y5B6 917 aa12.04□□□□□ -0.48
IFT88-204ENST00000461115 UBE4BO95155 1302 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms