RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 VSIG10LQ86VR7 867 aa14.26□□□□□ -0.13
HDAC4-207ENST00000461113 BLIDQ8IZY5 108 aa14.26□□□□□ -0.13
HDAC4-207ENST00000461113 CDHR1Q96JP9 859 aa14.26□□□□□ -0.13
HDAC4-207ENST00000461113 C8orf76Q96K31 380 aa14.26□□□□□ -0.13
HDAC4-207ENST00000461113 C17orf80Q9BSJ5 609 aa14.26□□□□□ -0.13
HDAC4-207ENST00000461113 MTG1Q9BT17 334 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-207ENST00000461113 FAM86C1Q9NVL1 165 aa14.26□□□□□ -0.13
HDAC4-207ENST00000461113 CFAP54Q96N23 3096 aa14.26□□□□□ -0.13
HDAC4-207ENST00000461113 ZNF318Q5VUA4 2279 aa14.25□□□□□ -0.13
HDAC4-207ENST00000461113 CCDC194A0A1B0GVG4 234 aa14.25□□□□□ -0.13
HDAC4-207ENST00000461113 K7ELQ4 463 aaPredicted RBP14.25□□□□□ -0.13
HDAC4-207ENST00000461113 NKRFO15226 690 aaKnown RBP eCLIP14.25□□□□□ -0.13
HDAC4-207ENST00000461113 GNL2Q13823 731 aaKnown RBP14.25□□□□□ -0.13
HDAC4-207ENST00000461113 GPNMBQ14956 572 aa14.25□□□□□ -0.13
HDAC4-207ENST00000461113 DUSP28Q4G0W2 176 aa14.25□□□□□ -0.13
HDAC4-207ENST00000461113 HERC4Q5GLZ8 1057 aaPredicted RBP14.25□□□□□ -0.13
HDAC4-207ENST00000461113 PCNX4Q63HM2 1172 aa14.25□□□□□ -0.13
HDAC4-207ENST00000461113 SNX21Q969T3 373 aa14.25□□□□□ -0.13
HDAC4-207ENST00000461113 MRPL38Q96DV4 380 aaKnown RBP14.25□□□□□ -0.13
HDAC4-207ENST00000461113 ANO3Q9BYT9 981 aa14.25□□□□□ -0.13
HDAC4-207ENST00000461113 WDR11Q9BZH6 1224 aa14.25□□□□□ -0.13
HDAC4-207ENST00000461113 NOD1Q9Y239 953 aa14.25□□□□□ -0.13
HDAC4-207ENST00000461113 MRVI1Q9Y6F6 885 aa14.25□□□□□ -0.13
HDAC4-207ENST00000461113 SCN5AQ14524 2016 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 TGFB3P10600 412 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 KRT2P35908 639 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 CPT1AP50416 773 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 PTPROQ16827 1216 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 TCTN1Q2MV58 587 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 TCEAL5Q5H9L2 206 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 NFRKBQ6P4R8 1299 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 KRT25Q7Z3Z0 450 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 DAGLBQ8NCG7 672 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 EDAQ92838 391 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 PBXIP1Q96AQ6 731 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 PABPC5Q96DU9 382 aaKnown RBP14.24□□□□□ -0.13
HDAC4-207ENST00000461113 AIFM3Q96NN9 605 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 PRRX2Q99811 253 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 KCNJ14Q9UNX9 436 aa14.24□□□□□ -0.13
HDAC4-207ENST00000461113 FRMPD4Q14CM0 1322 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 ZFHX2Q9C0A1 2572 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-207ENST00000461113 H3BQV1 296 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 RBAK-RBAKDNI3L0D1 243 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 CD2BP2O95400 341 aaKnown RBP14.23□□□□□ -0.13
HDAC4-207ENST00000461113 TXNP10599 105 aaKnown RBP14.23□□□□□ -0.13
HDAC4-207ENST00000461113 FDPSP14324 419 aaKnown RBP14.23□□□□□ -0.13
HDAC4-207ENST00000461113 SREBF1P36956 1147 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 CLK2P49760 499 aaKnown RBP14.23□□□□□ -0.13
HDAC4-207ENST00000461113 FOSBP53539 338 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 ARHGAP4P98171 946 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 TIGD5Q53EQ6 642 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 CNKSR3Q6P9H4 555 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 BMP8AQ7Z5Y6 402 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 RNF135Q8IUD6 432 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 BANK1Q8NDB2 785 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 OR6J1Q8NGC5 347 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 PHF20Q9BVI0 1012 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 TMEM260Q9NX78 707 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 RTEL1Q9NZ71 1219 aa14.23□□□□□ -0.13
HDAC4-207ENST00000461113 MCM3APO60318 1980 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 MYH6P13533 1939 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 RBM47A0AV96 593 aaKnown RBP14.22□□□□□ -0.13
HDAC4-207ENST00000461113 TMEM221A6NGB7 291 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 M0R296 226 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 MAFGO15525 162 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 FIBPO43427 364 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 PDCP20941 246 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 CHMP4BP1P59074 171 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 PTPN11Q06124 597 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-207ENST00000461113 ST3GAL1Q11201 340 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 BECN1Q14457 450 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 NONOQ15233 471 aaKnown RBP eCLIP14.22□□□□□ -0.13
HDAC4-207ENST00000461113 SUGP1Q8IWZ8 645 aaKnown RBP14.22□□□□□ -0.13
HDAC4-207ENST00000461113 CCDC155Q8N6L0 562 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 GIMAP8Q8ND71 665 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-207ENST00000461113 AFAP1L1Q8TED9 768 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 NAP1L4Q99733 375 aaKnown RBP14.22□□□□□ -0.13
HDAC4-207ENST00000461113 CLDND1Q9NY35 253 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 TCEAL9Q9UHQ7 104 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 ZDBF2Q9HCK1 2354 aa14.22□□□□□ -0.13
HDAC4-207ENST00000461113 ABHD14A-ACY1A0A1B0GW23 586 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 GH1P01241 217 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 SELPP16109 830 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 GJB2P29033 226 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 USP11P51784 963 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 NEDD9Q14511 834 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 COL19A1Q14993 1142 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 CLUL1Q15846 466 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 PTGISQ16647 500 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 TRIM67Q6ZTA4 783 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 DHX37Q8IY37 1157 aaKnown RBP14.21□□□□□ -0.13
HDAC4-207ENST00000461113 IL31RAQ8NI17 732 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 RASGRP4Q8TDF6 673 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 GPRASP2Q96D09 838 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 INTS4Q96HW7 963 aaKnown RBP14.21□□□□□ -0.13
HDAC4-207ENST00000461113 PGBD1Q96JS3 809 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 MLXIPQ9HAP2 919 aa14.21□□□□□ -0.13
HDAC4-207ENST00000461113 NBNO60934 754 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 DTNBO60941 627 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 CXCL10P02778 98 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms