RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 MT-CO1P00395 513 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 CKMP06732 381 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 CT47B1P0C2W7 299 aaPredicted RBP3.85□□□□□ -1.79
HPS3-203ENST00000460822 GOLGA6DP0CG33 693 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 PFKLP17858 780 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 PI3P19957 117 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 MVKQ03426 396 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 PAK1Q13153 545 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 TCIRG1Q13488 830 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 TMEM177Q53S58 311 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 SYCP2LQ5T4T6 812 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 EEF1DP3Q658K8 133 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 PPP4R4Q6NUP7 873 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 LBX2Q6XYB7 198 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 CBARPQ8N350 705 aaPredicted RBP3.85□□□□□ -1.79
HPS3-203ENST00000460822 CHST14Q8NCH0 376 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 PCDH19Q8TAB3 1148 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 CHTF18Q8WVB6 975 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 CAMKK2Q96RR4 588 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 MENTQ9BUN1 341 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 ZCCHC4Q9H5U6 513 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 TNFRSF12AQ9NP84 129 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 LUC7LQ9NQ29 371 aaKnown RBP3.85□□□□□ -1.79
HPS3-203ENST00000460822 PDLIM7Q9NR12 457 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 GOLGA6AQ9NYA3 693 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 TRBV23OR9-2A0A075B6M9 112 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 EIF3JO75822 258 aaKnown RBP3.85□□□□□ -1.79
HPS3-203ENST00000460822 LSSP48449 732 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 MAPKAPK2P49137 400 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 CDR1P51861 262 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 EPHB3P54753 998 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 CORO7P57737 925 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 ERVK-21P61565 698 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 KCNAB2Q13303 367 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 SSPNQ14714 243 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 KIZQ2M2Z5 673 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 E4F1Q66K89 784 aaPredicted RBP3.85□□□□□ -1.79
HPS3-203ENST00000460822 RCSD1Q6JBY9 416 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 CNKSR3Q6P9H4 555 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 PAQR3Q6TCH7 311 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 RPTNQ6XPR3 784 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 C11orf74Q86VG3 221 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 LDHDQ86WU2 507 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 TPH2Q8IWU9 490 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 FAM9AQ8IZU1 332 aaPredicted RBP3.85□□□□□ -1.79
HPS3-203ENST00000460822 USP33Q8TEY7 942 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 DIO2Q92813 273 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 AHCYL2Q96HN2 611 aaKnown RBP3.85□□□□□ -1.79
HPS3-203ENST00000460822 CHST12Q9NRB3 414 aa3.85□□□□□ -1.79
HPS3-203ENST00000460822 H2AFY2Q9P0M6 372 aaPredicted RBP3.85□□□□□ -1.79
HPS3-203ENST00000460822 PTPDC1A2A3K4 754 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 CCDC66A2RUB6 948 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 VSTM5A8MXK1 200 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 F8W031 263 aaPredicted RBP3.84□□□□□ -1.79
HPS3-203ENST00000460822 K7ESF4 209 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 RFPL1O75677 317 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 SOD2P04179 222 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 CYBBP04839 570 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 ATP2A2P16615 1042 aaKnown RBP3.84□□□□□ -1.79
HPS3-203ENST00000460822 BMP7P18075 431 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 PAMP19021 973 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 TACR1P25103 407 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 DNM2P50570 870 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 AFF3P51826 1226 aaKnown RBP3.84□□□□□ -1.79
HPS3-203ENST00000460822 KPNA1P52294 538 aaPredicted RBP3.84□□□□□ -1.79
HPS3-203ENST00000460822 HDAC1Q13547 482 aaPredicted RBP3.84□□□□□ -1.79
HPS3-203ENST00000460822 BRD3Q15059 726 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 TESK1Q15569 626 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 TARBP2Q15633 366 aaKnown RBP3.84□□□□□ -1.79
HPS3-203ENST00000460822 GFOD2Q3B7J2 385 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 FAM47CQ5HY64 1035 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 KSR2Q6VAB6 950 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 CISD2Q8N5K1 135 aaKnown RBP3.84□□□□□ -1.79
HPS3-203ENST00000460822 CLRN3Q8NCR9 226 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 RCBTB1Q8NDN9 531 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 B4GALT6Q9UBX8 382 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 PCDHA2Q9Y5H9 948 aa3.84□□□□□ -1.79
HPS3-203ENST00000460822 BUB1BO60566 1050 aaPredicted RBP3.83□□□□□ -1.8
HPS3-203ENST00000460822 ULK1O75385 1050 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 SASH1O94885 1247 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 SNUPNO95149 360 aaKnown RBP3.83□□□□□ -1.8
HPS3-203ENST00000460822 INHBBP09529 407 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 CCND1P24385 295 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 MECP2P51608 486 aaKnown RBP3.83□□□□□ -1.8
HPS3-203ENST00000460822 ST5P78524 1137 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 OCRLQ01968 901 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 HLTFQ14527 1009 aaKnown RBP eCLIP3.83□□□□□ -1.8
HPS3-203ENST00000460822 DDB1Q16531 1140 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 PLEKHN1Q494U1 663 aaPredicted RBP3.83□□□□□ -1.8
HPS3-203ENST00000460822 OVCH1Q7RTY7 1134 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 FUBP3Q96I24 572 aaKnown RBP eCLIP3.83□□□□□ -1.8
HPS3-203ENST00000460822 IPPKQ9H8X2 491 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 C14orf119Q9NWQ9 140 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 NUDT5Q9UKK9 219 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 COMMD10Q9Y6G5 202 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 NPHP3-ACAD11A0A0J9YXS1 232 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.83□□□□□ -1.8
HPS3-203ENST00000460822 WNT9AO14904 365 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 SRGAP3O43295 1099 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 NPHS1O60500 1241 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms