RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 PKN3Q6P5Z2 889 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 C16orf59Q7L2K0 433 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 OVCH1Q7RTY7 1134 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 LZTR1Q8N653 840 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 DVL3Q92997 716 aaPredicted RBP4.84□□□□□ -1.63
RFC4-211ENST00000460408 CHAMP1Q96JM3 812 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 JAM3Q9BX67 310 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 BTG4Q9NY30 223 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 SAMD15Q9P1V8 674 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 CBLCQ9ULV8 474 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 CCDC66A2RUB6 948 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 OVOL3O00110 214 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 CBX4O00257 560 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 KPNA6O60684 536 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 SRGAP2CP0DJJ0 459 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 PYGMP11217 842 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 C6P13671 934 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 SOX5P35711 763 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 FLT3P36888 993 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 KIAA2012Q0VF49 1180 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 CFAP100Q494V2 611 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 MROH9Q5TGP6 573 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 PIK3R6Q5UE93 754 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 STRA8Q7Z7C7 330 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 DDX53Q86TM3 631 aaKnown RBP4.83□□□□□ -1.64
RFC4-211ENST00000460408 KIF18BQ86Y91 864 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 RPUSD2Q8IZ73 545 aaKnown RBP4.83□□□□□ -1.64
RFC4-211ENST00000460408 AHI1Q8N157 1196 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 UBR7Q8N806 425 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 IGSF22Q8N9C0 903 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 ZCRB1Q8TBF4 217 aaKnown RBP4.83□□□□□ -1.64
RFC4-211ENST00000460408 FBXW5Q969U6 566 aa4.83□□□□□ -1.64
RFC4-211ENST00000460408 TRMT2BQ96GJ1 504 aaKnown RBP4.83□□□□□ -1.64
RFC4-211ENST00000460408 SCAND2PQ9GZW5 306 aaPredicted RBP4.83□□□□□ -1.64
RFC4-211ENST00000460408 NOP58Q9Y2X3 529 aaKnown RBP4.83□□□□□ -1.64
RFC4-211ENST00000460408 TCRBV5S4A2TA0A5A2 114 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 ZNF561-AS1K7EIQ3 104 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 M0R2C6 588 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 TRAF5O00463 557 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 EYA4O95677 639 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 NTRK1P04629 796 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 AMY2AP04746 511 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 AMY2BP19961 511 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 TACR2P21452 398 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 RPL13P26373 211 aaKnown RBP4.82□□□□□ -1.64
RFC4-211ENST00000460408 NEK4P51957 841 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 HMGA2P52926 109 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 LACTBP83111 547 aaPredicted RBP4.82□□□□□ -1.64
RFC4-211ENST00000460408 SMAD4Q13485 552 aaKnown RBP4.82□□□□□ -1.64
RFC4-211ENST00000460408 DHCR24Q15392 516 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 RGL3Q3MIN7 710 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 TMEM177Q53S58 311 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 FAM47CQ5HY64 1035 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 FAM26FQ5R3K3 315 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 WWC2Q6AWC2 1192 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 UBE2R2Q712K3 238 aaPredicted RBP4.82□□□□□ -1.64
RFC4-211ENST00000460408 OTOP1Q7RTM1 612 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 OTOP3Q7RTS5 596 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 LGI4Q8N135 537 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 Q8N1X5 172 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 CHST13Q8NET6 341 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 SH3RF2Q8TEC5 729 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.82□□□□□ -1.64
RFC4-211ENST00000460408 DDX11Q96FC9 970 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 WNK4Q96J92 1243 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 KCNJ15Q99712 375 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 EPB41L1Q9H4G0 881 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 SMURF1Q9HCE7 757 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 PCDH18Q9HCL0 1135 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 INVSQ9Y283 1065 aa4.82□□□□□ -1.64
RFC4-211ENST00000460408 NKRFO15226 690 aaKnown RBP eCLIP4.81□□□□□ -1.64
RFC4-211ENST00000460408 F2P00734 622 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 C8BP07358 591 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 CYP2C8P10632 490 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 PDE6AP16499 860 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 THBS2P35442 1172 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 ACVRL1P37023 503 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 GDF5P43026 501 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 SLC6A11P48066 632 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 DSG1Q02413 1049 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 EMC4Q5J8M3 183 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 CREB3L3Q68CJ9 461 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 CHST14Q8NCH0 376 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 LEO1Q8WVC0 666 aaPredicted RBP4.81□□□□□ -1.64
RFC4-211ENST00000460408 GORASP1Q9BQQ3 440 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 C11orf84Q9BUA3 381 aaPredicted RBP4.81□□□□□ -1.64
RFC4-211ENST00000460408 SLC6A20Q9NP91 592 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 B4GALT6Q9UBX8 382 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 ATP8A1Q9Y2Q0 1164 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 COA3Q9Y2R0 106 aaPredicted RBP4.81□□□□□ -1.64
RFC4-211ENST00000460408 TSC22D4Q9Y3Q8 395 aa4.81□□□□□ -1.64
RFC4-211ENST00000460408 hCG_2014768A0A024R1R8 64 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 MROH6A6NGR9 719 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 ZNF891A8MT65 544 aaPredicted RBP4.8□□□□□ -1.64
RFC4-211ENST00000460408 CYR61O00622 381 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 GSTA4O15217 222 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 TADA3O75528 432 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 DGKIO75912 1065 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 SLPIP03973 132 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 APPP05067 770 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms