RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 IGHDP01880 384 aa10.96□□□□□ -0.65
EPB41-208ENST00000460378 RPL13P26373 211 aaKnown RBP10.96□□□□□ -0.65
EPB41-208ENST00000460378 GPM6BQ13491 265 aa10.96□□□□□ -0.65
EPB41-208ENST00000460378 ARMC5Q96C12 935 aa10.96□□□□□ -0.65
EPB41-208ENST00000460378 ZNF521Q96K83 1311 aa10.96□□□□□ -0.65
EPB41-208ENST00000460378 BCRP11274 1271 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 GOLGA8FQ08AF8 430 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 GOLGA8DPQ0D2H9 430 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 FERMT3Q86UX7 667 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 USP38Q8NB14 1042 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 GTPBP4Q9BZE4 634 aaKnown RBP10.96□□□□□ -0.66
EPB41-208ENST00000460378 IL23AQ9NPF7 189 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 C1orf112Q9NSG2 853 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 ZMYM6O95789 1325 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 ABHD14A-ACY1A0A1B0GW23 586 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 K7ERI5 159 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 PSMC6P62333 389 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 ELAVL2Q12926 359 aaKnown RBP10.96□□□□□ -0.66
EPB41-208ENST00000460378 PGBD3Q8N328 593 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 TBCKQ8TEA7 893 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 TRIB2Q92519 343 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 UBN1Q9NPG3 1134 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 CLDND1Q9NY35 253 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 FRMD4BQ9Y2L6 1034 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 PCDHB13Q9Y5F0 798 aa10.96□□□□□ -0.66
EPB41-208ENST00000460378 ATAT1Q5SQI0 421 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 NECAB1Q8N987 351 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 RNF34Q969K3 372 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 ALDH2P05091 517 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 USP8P40818 1118 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 GRB14Q14449 540 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 SASS6Q6UVJ0 657 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 PXMP2Q9NR77 195 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 BTBD7Q9P203 1132 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 FAN1Q9Y2M0 1017 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 A0A1W2PQ45 241 aaPredicted RBP10.95□□□□□ -0.66
EPB41-208ENST00000460378 A0A1W2PQY0 241 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 QARSP47897 775 aaKnown RBP10.95□□□□□ -0.66
EPB41-208ENST00000460378 TGS1Q96RS0 853 aaKnown RBP10.95□□□□□ -0.66
EPB41-208ENST00000460378 MMS19Q96T76 1030 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 SPZ1Q9BXG8 430 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 MMRN2Q9H8L6 949 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.95□□□□□ -0.66
EPB41-208ENST00000460378 N4BP2Q86UW6 1770 aaPredicted RBP10.95□□□□□ -0.66
EPB41-208ENST00000460378 ZC3H11AO75152 810 aaKnown RBP eCLIP10.95□□□□□ -0.666e-6■□□□□ 11.2
EPB41-208ENST00000460378 P4HBP07237 508 aaKnown RBP10.95□□□□□ -0.66
EPB41-208ENST00000460378 MXD4Q14582 209 aaPredicted RBP10.95□□□□□ -0.66
EPB41-208ENST00000460378 LY6KQ17RY6 165 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 KANK3Q6NY19 840 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
EPB41-208ENST00000460378 SYTL5Q8TDW5 730 aaPredicted RBP10.95□□□□□ -0.66
EPB41-208ENST00000460378 FAM20AQ96MK3 541 aa10.95□□□□□ -0.66
EPB41-208ENST00000460378 NFIBO00712 420 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 APOA5Q6Q788 366 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 PDILTQ8N807 584 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 CYP39A1Q9NYL5 469 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 NRCAMQ92823 1304 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 PAPPAQ13219 1627 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 YWHAEP62258 255 aaKnown RBP10.94□□□□□ -0.66
EPB41-208ENST00000460378 CREMQ03060 361 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 NR1H3Q13133 447 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 GRIK4Q16099 956 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 EFCAB12Q6NXP0 572 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 NFRKBQ6P4R8 1299 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 CABP7Q86V35 215 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 GANCQ8TET4 914 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 MAF1Q9H063 256 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 SNX25Q9H3E2 840 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 RPF1Q9H9Y2 349 aaKnown RBP10.94□□□□□ -0.66
EPB41-208ENST00000460378 LGR5O75473 907 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 NLRP11P59045 1033 aaKnown RBP10.94□□□□□ -0.66
EPB41-208ENST00000460378 TMTC3Q6ZXV5 915 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 ZNF589Q86UQ0 364 aaPredicted RBP10.94□□□□□ -0.66
EPB41-208ENST00000460378 NME8Q8N427 588 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 NAT10Q9H0A0 1025 aaKnown RBP10.94□□□□□ -0.66
EPB41-208ENST00000460378 THEGQ9P2T0 379 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 STK39Q9UEW8 545 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 Q9Y3F1 56 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 COL18A1P39060 1754 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 SH2B2O14492 632 aaPredicted RBP10.94□□□□□ -0.66
EPB41-208ENST00000460378 OR52Z1P0C646 297 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 LAG3P18627 525 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 NFKBIBQ15653 356 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 KYAT1Q16773 422 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 CNKSR3Q6P9H4 555 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 TBC1D10CQ8IV04 446 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 SH3GLB2Q9NR46 395 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 SLC38A7Q9NVC3 462 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 SLC8A2Q9UPR5 921 aa10.94□□□□□ -0.66
EPB41-208ENST00000460378 H7C4K7 107 aa10.93□□□□□ -0.66
EPB41-208ENST00000460378 C2CD2LO14523 706 aa10.93□□□□□ -0.66
EPB41-208ENST00000460378 PRPF3O43395 683 aaKnown RBP10.93□□□□□ -0.66
EPB41-208ENST00000460378 MAGEA10P43363 369 aaPredicted RBP10.93□□□□□ -0.66
EPB41-208ENST00000460378 ATXN3P54252 364 aaPredicted RBP10.93□□□□□ -0.66
EPB41-208ENST00000460378 IFRD2Q12894 506 aaPredicted RBP10.93□□□□□ -0.66
EPB41-208ENST00000460378 SLFNL1Q499Z3 407 aa10.93□□□□□ -0.66
EPB41-208ENST00000460378 BBXQ8WY36 941 aaPredicted RBP10.93□□□□□ -0.66
EPB41-208ENST00000460378 ZNF274Q96GC6 653 aaPredicted RBP10.93□□□□□ -0.66
EPB41-208ENST00000460378 TEPSINQ96N21 525 aa10.93□□□□□ -0.66
EPB41-208ENST00000460378 PDCD2LQ9BRP1 358 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms