RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 ATXN2LQ8WWM7 1075 aaKnown RBP16.94■□□□□ 0.3
ATG4B-213ENST00000460211 ATP6V0A1Q93050 837 aa16.94■□□□□ 0.3
ATG4B-213ENST00000460211 ASB2Q96Q27 587 aa16.94■□□□□ 0.3
ATG4B-213ENST00000460211 YBX2Q9Y2T7 364 aaKnown RBP16.94■□□□□ 0.3
ATG4B-213ENST00000460211 GTF3C3Q9Y5Q9 886 aa16.94■□□□□ 0.3
ATG4B-213ENST00000460211 DDX39AO00148 427 aaKnown RBP16.93■□□□□ 0.3
ATG4B-213ENST00000460211 FGBP02675 491 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 IQCF3P0C7M6 154 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 FDPSP14324 419 aaKnown RBP16.93■□□□□ 0.3
ATG4B-213ENST00000460211 KRT2P35908 639 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 STAT5BP51692 787 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 RAB30Q15771 203 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 FAM160B1Q5W0V3 765 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 MIS18BP1Q6P0N0 1132 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 MOXD1Q6UVY6 613 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 CCDC83Q8IWF9 413 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 MICALL1Q8N3F8 863 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 AFAP1L1Q8TED9 768 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 HERVK_113Q902F9 699 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 SCLYQ96I15 445 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 NAP1L4Q99733 375 aaKnown RBP16.93■□□□□ 0.3
ATG4B-213ENST00000460211 WNT8AQ9H1J5 351 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 RNPEPQ9H4A4 650 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 SLC28A3Q9HAS3 691 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 TELO2Q9Y4R8 837 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 EMSYQ7Z589 1322 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 NRCAMQ92823 1304 aa16.93■□□□□ 0.3
ATG4B-213ENST00000460211 BACH1O14867 736 aa16.92■□□□□ 0.3
ATG4B-213ENST00000460211 JAK2O60674 1132 aa16.92■□□□□ 0.3
ATG4B-213ENST00000460211 LGR5O75473 907 aa16.92■□□□□ 0.3
ATG4B-213ENST00000460211 SELPP16109 830 aa16.92■□□□□ 0.3
ATG4B-213ENST00000460211 MARK3P27448 753 aa16.92■□□□□ 0.3
ATG4B-213ENST00000460211 SLC26A2P50443 739 aa16.92■□□□□ 0.3
ATG4B-213ENST00000460211 RABGGTBP53611 331 aa16.92■□□□□ 0.3
ATG4B-213ENST00000460211 MRPS5P82675 430 aaKnown RBP16.92■□□□□ 0.3
ATG4B-213ENST00000460211 HMGN5P82970 282 aaKnown RBP16.92■□□□□ 0.3
ATG4B-213ENST00000460211 ZNF200P98182 395 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-213ENST00000460211 KRT76Q01546 638 aa16.92■□□□□ 0.3
ATG4B-213ENST00000460211 NPY5RQ15761 445 aa16.92■□□□□ 0.3
ATG4B-213ENST00000460211 ZNF746Q6NUN9 644 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-213ENST00000460211 PLPPR4Q7Z2D5 763 aa16.92■□□□□ 0.3
ATG4B-213ENST00000460211 SETD4Q9NVD3 440 aa16.92■□□□□ 0.3
ATG4B-213ENST00000460211 CHD7Q9P2D1 2997 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 CYP3A7-CYP3A51PA0A087WV96 503 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 RRN3P2A6NIE6 340 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 DHX15O43143 795 aaKnown RBP16.91■□□□□ 0.3
ATG4B-213ENST00000460211 DTNBO60941 627 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 ATG7O95352 703 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 ACTN1P12814 892 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 CYP3A7P24462 503 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 MCM2P49736 904 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 RBL2Q08999 1139 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 PPFIA1Q13136 1202 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 SAFBQ15424 915 aaKnown RBP eCLIP16.91■□□□□ 0.3
ATG4B-213ENST00000460211 INF2Q27J81 1249 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 Q4G0T1 1027 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 NEK8Q86SG6 692 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 SERINC5Q86VE9 423 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 SMAP1Q8IYB5 467 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-213ENST00000460211 FAM184AQ8NB25 1140 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 TBC1D32Q96NH3 1257 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 UHRF1Q96T88 793 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-213ENST00000460211 RIT2Q99578 217 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 FTOQ9C0B1 505 aaKnown RBP eCLIP16.91■□□□□ 0.3
ATG4B-213ENST00000460211 GJB4Q9NTQ9 266 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 REV3LO60673 3130 aa16.91■□□□□ 0.3
ATG4B-213ENST00000460211 TREHO43280 583 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 GAS7O60861 476 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 PSAPP07602 524 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 CKBP12277 381 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 MYOGP15173 224 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 GCFC2P16383 781 aaKnown RBP16.9■□□□□ 0.3
ATG4B-213ENST00000460211 HOXC8P31273 242 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 THPOP40225 353 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 LETM2Q2VYF4 491 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 ABHD15Q6UXT9 468 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 PIK3AP1Q6ZUJ8 805 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 LRRC8DQ7L1W4 858 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 DEFB128Q7Z7B8 93 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 DHX38Q92620 1227 aaKnown RBP16.9■□□□□ 0.3
ATG4B-213ENST00000460211 UIMC1Q96RL1 719 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 CTAGE1Q96RT6 745 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 DDX25Q9UHL0 483 aaKnown RBP16.9■□□□□ 0.3
ATG4B-213ENST00000460211 TRPC6Q9Y210 931 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 SAMM50Q9Y512 469 aa16.9■□□□□ 0.3
ATG4B-213ENST00000460211 TCF20Q9UGU0 1960 aaKnown RBP16.89■□□□□ 0.3
ATG4B-213ENST00000460211 ZBBXA8MT70 800 aa16.89■□□□□ 0.29
ATG4B-213ENST00000460211 MSH4O15457 936 aa16.89■□□□□ 0.29
ATG4B-213ENST00000460211 CAND2O75155 1236 aa16.89■□□□□ 0.29
ATG4B-213ENST00000460211 CCNE2O96020 404 aa16.89■□□□□ 0.29
ATG4B-213ENST00000460211 MMP1P03956 469 aa16.89■□□□□ 0.29
ATG4B-213ENST00000460211 GRIK4Q16099 956 aa16.89■□□□□ 0.29
ATG4B-213ENST00000460211 LRCH2Q5VUJ6 765 aa16.89■□□□□ 0.29
ATG4B-213ENST00000460211 PPP2R2DQ66LE6 453 aa16.89■□□□□ 0.29
ATG4B-213ENST00000460211 KRT40Q6A162 431 aa16.89■□□□□ 0.29
ATG4B-213ENST00000460211 PPP4R3AQ6IN85 833 aa16.89■□□□□ 0.29
ATG4B-213ENST00000460211 TAF2Q6P1X5 1199 aa16.89■□□□□ 0.29
ATG4B-213ENST00000460211 RSPH3Q86UC2 560 aa16.89■□□□□ 0.29
ATG4B-213ENST00000460211 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
ATG4B-213ENST00000460211 LENG9Q96B70 501 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms