RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TRIM5Q9C035 493 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 ASCC2Q9H1I8 757 aaPredicted RBP11.5□□□□□ -0.57
HERC4-207ENST00000460168 MEIS1O00470 390 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 IKBKBO14920 756 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 GAS7O60861 476 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 OATP04181 439 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 MYCLP12524 364 aaPredicted RBP11.5□□□□□ -0.57
HERC4-207ENST00000460168 MYL5Q02045 173 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 PABPC4Q13310 644 aaKnown RBP eCLIP11.5□□□□□ -0.57
HERC4-207ENST00000460168 SNAPC2Q13487 334 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 PGM5Q15124 567 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 PAGR1Q9BTK6 254 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 TRIM9Q9C026 710 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 PXMP2Q9NR77 195 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 BLOC1S4Q9NUP1 217 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 POTEB3A0JP26 581 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 UNCXA6NJT0 531 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 IPO5O00410 1097 aaKnown RBP11.49□□□□□ -0.57
HERC4-207ENST00000460168 AP5Z1O43299 807 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 CHMP2AO43633 222 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 MYBL2P10244 700 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 ARP10275 920 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 ITGB5P18084 799 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 HERVK_113P62684 666 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 ASIC1P78348 528 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 MCM6Q14566 821 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 ECM1Q16610 540 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 TMEM119Q4V9L6 283 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 POTEBQ6S5H4 581 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 SYT10Q6XYQ8 523 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 SMYD4Q8IYR2 804 aaPredicted RBP11.49□□□□□ -0.57
HERC4-207ENST00000460168 RAD54LQ92698 747 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 CCDC47Q96A33 483 aaKnown RBP11.49□□□□□ -0.57
HERC4-207ENST00000460168 PURBQ96QR8 312 aaKnown RBP11.49□□□□□ -0.57
HERC4-207ENST00000460168 GBA2Q9HCG7 927 aaPredicted RBP11.49□□□□□ -0.57
HERC4-207ENST00000460168 KCNH7Q9NS40 1196 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 VAV3Q9UKW4 847 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 BLOC1S6Q9UL45 172 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 KIAA1024Q9UPX6 916 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 STK24Q9Y6E0 443 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 FRMPD4Q14CM0 1322 aa11.49□□□□□ -0.57
HERC4-207ENST00000460168 RBM47A0AV96 593 aaKnown RBP11.48□□□□□ -0.57
HERC4-207ENST00000460168 SOCS7O14512 581 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 TRIM66O15016 1216 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 PEX10O60683 326 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 PSMD10O75832 226 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 CELF2O95319 508 aaKnown RBP11.48□□□□□ -0.57
HERC4-207ENST00000460168 GJA5P36382 358 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 FKBP1BP68106 108 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 MTMR1Q13613 665 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 PDCD2Q16342 344 aaPredicted RBP11.48□□□□□ -0.57
HERC4-207ENST00000460168 HYIQ5T013 277 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 WDR78Q5VTH9 848 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 NAIF1Q69YI7 327 aaPredicted RBP11.48□□□□□ -0.57
HERC4-207ENST00000460168 KLHL10Q6JEL2 608 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 C2orf69Q8N8R5 385 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 LSM14AQ8ND56 463 aaKnown RBP11.48□□□□□ -0.57
HERC4-207ENST00000460168 CHST13Q8NET6 341 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 SLC5A5Q92911 643 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 SH3GL3Q99963 347 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 PDCD2LQ9BRP1 358 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 WDR11Q9BZH6 1224 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 A1CFQ9NQ94 594 aaKnown RBP11.48□□□□□ -0.57
HERC4-207ENST00000460168 CYP39A1Q9NYL5 469 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.48□□□□□ -0.57
HERC4-207ENST00000460168 BTBD7Q9P203 1132 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 POTEFA5A3E0 1075 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 SLC26A4O43511 780 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 MED24O75448 989 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 SSBP05455 408 aaKnown RBP eCLIP11.48□□□□□ -0.57
HERC4-207ENST00000460168 BCRP11274 1271 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 OSBPP22059 807 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 RPA1P27694 616 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 MRPS9P82933 396 aaKnown RBP11.48□□□□□ -0.57
HERC4-207ENST00000460168 CYP4A11Q02928 519 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 IFT88Q13099 833 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 SLC5A9Q2M3M2 681 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 ZNF658Q5TYW1 1059 aaPredicted RBP11.48□□□□□ -0.57
HERC4-207ENST00000460168 POTEGQ6S5H5 508 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 POTEEQ6S8J3 1075 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 OTOP1Q7RTM1 612 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 KCNK18Q7Z418 384 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 NCAPG2Q86XI2 1143 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 CATSPER3Q86XQ3 398 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 ANKRD35Q8N283 1001 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 TXLNBQ8N3L3 684 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 NSUN6Q8TEA1 469 aaKnown RBP11.48□□□□□ -0.57
HERC4-207ENST00000460168 C7orf25Q9BPX7 421 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 LRRC27Q9C0I9 530 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 SPATC1LQ9H0A9 340 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 PKD2L1Q9P0L9 805 aa11.48□□□□□ -0.57
HERC4-207ENST00000460168 A0A0G2JMZ2 1700 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 IMPDH2P12268 514 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 MKRN3Q13064 507 aaKnown RBP11.47□□□□□ -0.57
HERC4-207ENST00000460168 PPP2R5CQ13362 524 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 KCNB1Q14721 858 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 NCAPHQ15003 741 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 TBC1D25Q3MII6 688 aa11.47□□□□□ -0.57
HERC4-207ENST00000460168 KMT5BQ4FZB7 885 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms