RNA–Protein interactions for RNA: ENST00000460100.1

IMP4-207, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-207ENST00000460100 KIF3AQ9Y496 699 aa16.36■□□□□ 0.21
IMP4-207ENST00000460100 PCDHA10Q9Y5I2 948 aa16.36■□□□□ 0.21
IMP4-207ENST00000460100 MAFBQ9Y5Q3 323 aaPredicted RBP16.36■□□□□ 0.21
IMP4-207ENST00000460100 NRCAMQ92823 1304 aa16.36■□□□□ 0.21
IMP4-207ENST00000460100 MYH9P35579 1960 aaKnown RBP16.35■□□□□ 0.21
IMP4-207ENST00000460100 LAMA3Q16787 3333 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 C17orf102A2RUQ5 167 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 WDR64B1ANS9 1081 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 GAS7O60861 476 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 ATP4AP20648 1035 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 PLCB4Q15147 1175 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 C16orf59Q7L2K0 433 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 NOSTRINQ8IVI9 506 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 RDM1Q8NG50 284 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 CAGE1Q8TC20 777 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 WNT8BQ93098 351 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 INTS4Q96HW7 963 aaKnown RBP16.35■□□□□ 0.21
IMP4-207ENST00000460100 TEKT3Q9BXF9 490 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 UNC45AQ9H3U1 944 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 SETD4Q9NVD3 440 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 VAV3Q9UKW4 847 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 SMC3Q9UQE7 1217 aa16.35■□□□□ 0.21
IMP4-207ENST00000460100 TANC1Q9C0D5 1861 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 MBLAC1A4D2B0 266 aaPredicted RBP16.34■□□□□ 0.21
IMP4-207ENST00000460100 K7ELQ4 463 aaPredicted RBP16.34■□□□□ 0.21
IMP4-207ENST00000460100 TREHO43280 583 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 PSAPP07602 524 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 CSF2RAP15509 400 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 MARK3P27448 753 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 SFNP31947 248 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 JAK3P52333 1124 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 FPGSQ05932 587 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 PPP2R5CQ13362 524 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 MARCH8Q5T0T0 291 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 SWSAP1Q6NVH7 229 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 TRAF7Q6Q0C0 670 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 TMEM199Q8N511 208 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 LMBR1Q8WVP7 490 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 MTMR9Q96QG7 549 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 UBE2OQ9C0C9 1292 aaKnown RBP16.34■□□□□ 0.21
IMP4-207ENST00000460100 ZNF302Q9NR11 478 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 DISC1Q9NRI5 854 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 NOD1Q9Y239 953 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 IGSF9BQ9UPX0 1349 aa16.34■□□□□ 0.21
IMP4-207ENST00000460100 IQCF3P0C7M6 154 aa16.33■□□□□ 0.2
IMP4-207ENST00000460100 GNAT1P11488 350 aa16.33■□□□□ 0.2
IMP4-207ENST00000460100 INSRRP14616 1297 aa16.33■□□□□ 0.2
IMP4-207ENST00000460100 TRAPPC10P48553 1259 aa16.33■□□□□ 0.2
IMP4-207ENST00000460100 SPIRE1Q08AE8 756 aa16.33■□□□□ 0.2
IMP4-207ENST00000460100 ORC2Q13416 577 aaPredicted RBP16.33■□□□□ 0.2
IMP4-207ENST00000460100 BFSP2Q13515 415 aa16.33■□□□□ 0.2
IMP4-207ENST00000460100 GPNMBQ14956 572 aa16.33■□□□□ 0.2
IMP4-207ENST00000460100 HABP4Q5JVS0 413 aaKnown RBP16.33■□□□□ 0.2
IMP4-207ENST00000460100 FAM160B1Q5W0V3 765 aa16.33■□□□□ 0.2
IMP4-207ENST00000460100 TDHQ8IZJ6 230 aa16.33■□□□□ 0.2
IMP4-207ENST00000460100 ATP8B4Q8TF62 1192 aa16.33■□□□□ 0.2
IMP4-207ENST00000460100 ATP6V0A1Q93050 837 aa16.33■□□□□ 0.2
IMP4-207ENST00000460100 POTEB3A0JP26 581 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 RRN3P2A6NIE6 340 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 BACH1O14867 736 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 ZNF862O60290 1169 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 CKBP12277 381 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 TOB1P50616 345 aaPredicted RBP16.32■□□□□ 0.2
IMP4-207ENST00000460100 CCL23P55773 120 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 PPFIA1Q13136 1202 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 PPIGQ13427 754 aaKnown RBP eCLIP16.32■□□□□ 0.21e-7■■□□□ 11.7
IMP4-207ENST00000460100 SCN5AQ14524 2016 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 GRIK4Q16099 956 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 POTEBQ6S5H4 581 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 RPAINQ86UA6 219 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 SLFN12Q8IYM2 578 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 TNPO1Q92973 898 aaKnown RBP16.32■□□□□ 0.2
IMP4-207ENST00000460100 GABBR1Q9UBS5 961 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 TCEAL9Q9UHQ7 104 aa16.32■□□□□ 0.2
IMP4-207ENST00000460100 TET1Q8NFU7 2136 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 ZBTB42B2RXF5 422 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 EML1O00423 815 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 HBP1O60381 514 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 SELPP16109 830 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 SHHQ15465 462 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 C9orf50Q5SZB4 431 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 LARP1BQ659C4 914 aaKnown RBP16.31■□□□□ 0.2
IMP4-207ENST00000460100 PDXDC2PQ6P474 469 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 CCDC155Q8N6L0 562 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 RETREG2Q8NC44 543 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 SCLYQ96I15 445 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 TMEM60Q9H2L4 133 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 IL23AQ9NPF7 189 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 SAMM50Q9Y512 469 aa16.31■□□□□ 0.2
IMP4-207ENST00000460100 COL1A2P08123 1366 aa16.3■□□□□ 0.2
IMP4-207ENST00000460100 CHMP2AO43633 222 aa16.3■□□□□ 0.2
IMP4-207ENST00000460100 NEMFO60524 1076 aa16.3■□□□□ 0.2
IMP4-207ENST00000460100 CAND2O75155 1236 aa16.3■□□□□ 0.2
IMP4-207ENST00000460100 STBD1O95210 358 aa16.3■□□□□ 0.2
IMP4-207ENST00000460100 RFC2P35250 354 aa16.3■□□□□ 0.2
IMP4-207ENST00000460100 CALCRLQ16602 461 aa16.3■□□□□ 0.2
IMP4-207ENST00000460100 UGCGQ16739 394 aa16.3■□□□□ 0.2
IMP4-207ENST00000460100 LRIT3Q3SXY7 679 aa16.3■□□□□ 0.2
IMP4-207ENST00000460100 TMEM240Q5SV17 173 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms