RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 DHTKD1Q96HY7 919 aaPredicted RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 PIH1D3Q9NQM4 214 aaKnown RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 ATP8A2Q9NTI2 1148 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 SH3BP5O60239 455 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 CYP2E1P05181 493 aaPredicted RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 MCF2P10911 925 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 FKBP1AP62942 108 aaKnown RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 CXCL9Q07325 125 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 TBC1D10BQ4KMP7 808 aaPredicted RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 ANKRD27Q96NW4 1050 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.55□□□□□ -0.72
UFD1-205ENST00000459854 LSM14BQ9BX40 385 aaKnown RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 ZNF408Q9H9D4 720 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 LTBP3Q9NS15 1303 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 TCP10L2B9ZVM9 353 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 MEFVO15553 781 aaPredicted RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 PRDX5P30044 214 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 LONRF3Q496Y0 759 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 MAPKAPK5Q8IW41 473 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 ANKRD7Q92527 254 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 OSBPL5Q9H0X9 879 aaPredicted RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 PARP1P09874 1014 aaKnown RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 TCP10Q12799 353 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 HADHQ16836 314 aaKnown RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 DCUN1D2Q6PH85 259 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 ANO5Q75V66 913 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 CABP7Q86V35 215 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 PSMB7Q99436 277 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 DHX36Q9H2U1 1008 aaKnown RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 C4AP0C0L4 1744 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 FAM205AQ6ZU69 1335 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 XRCC5P13010 732 aaKnown RBP10.54□□□□□ -0.72
UFD1-205ENST00000459854 VPS41P49754 854 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 KPNA2P52292 529 aaKnown RBP10.54□□□□□ -0.72
UFD1-205ENST00000459854 AP2B1P63010 937 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 SNX1Q13596 522 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 ME3Q16798 604 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 HHIPL2Q6UWX4 724 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 TBC1D1Q86TI0 1168 aaPredicted RBP10.54□□□□□ -0.72
UFD1-205ENST00000459854 ZC3H18Q86VM9 953 aaKnown RBP10.54□□□□□ -0.72
UFD1-205ENST00000459854 VGLL2Q8N8G2 317 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 C3orf20Q8ND61 904 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 PI4K2BQ8TCG2 481 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 PICK1Q9NRD5 415 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 LRWD1Q9UFC0 647 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 RGPD3A6NKT7 1758 aaPredicted RBP10.54□□□□□ -0.72
UFD1-205ENST00000459854 RGPD4Q7Z3J3 1758 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 MROH7-TTC4A0A0A0MT08 1334 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 CLRN2A0PK11 232 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 E7ENQ6 273 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 KLRK1P26718 216 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 NOSTRINQ8IVI9 506 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 MYOCDQ8IZQ8 938 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 CEP70Q8NHQ1 597 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 U2AF1L4Q8WU68 220 aaKnown RBP10.54□□□□□ -0.72
UFD1-205ENST00000459854 DPH5Q9H2P9 285 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 NDUFA13Q9P0J0 144 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 TNS1Q9HBL0 1735 aaKnown RBP10.54□□□□□ -0.72
UFD1-205ENST00000459854 RFX7Q2KHR2 1363 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 LAD1O00515 517 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 LONP1P36776 959 aaKnown RBP10.54□□□□□ -0.72
UFD1-205ENST00000459854 UPF3AQ9H1J1 476 aaKnown RBP10.54□□□□□ -0.72
UFD1-205ENST00000459854 FAM207AQ9NSI2 230 aaPredicted RBP10.54□□□□□ -0.72
UFD1-205ENST00000459854 SAP30BPQ9UHR5 308 aaKnown RBP10.54□□□□□ -0.72
UFD1-205ENST00000459854 PCDHA7Q9UN72 937 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 ANGPTL3Q9Y5C1 460 aa10.54□□□□□ -0.72
UFD1-205ENST00000459854 PODXLO00592 558 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 STX1BP61266 288 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 CAV1Q03135 178 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 MMEL1Q495T6 779 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 KMT5BQ4FZB7 885 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 DPF2Q92785 391 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 CSRNP1Q96S65 589 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 SH2D4AQ9H788 454 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 NDE1Q9NXR1 346 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 RPAP1Q9BWH6 1393 aaPredicted RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 INHBAP08476 426 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 VEGFAP15692 232 aaPredicted RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 ZBED6P86452 979 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 ZMYM1Q5SVZ6 1142 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 RSPH3Q86UC2 560 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 NLRP14Q86W24 1093 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 MAP7D3Q8IWC1 876 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 USP28Q96RU2 1077 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 CACYBPQ9HB71 228 aaKnown RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 ADARB2Q9NS39 739 aaKnown RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 RCOR1Q9UKL0 485 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 SCN7AQ01118 1682 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 NUP98P52948 1817 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 GRID2IPA4D2P6 1211 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 MCF2LO15068 1137 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 WDR46O15213 610 aaKnown RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 TRAPPC10P48553 1259 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 DHX9Q08211 1270 aaKnown RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 TRMT44Q8IYL2 757 aaKnown RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 SYT2Q8N9I0 419 aaPredicted RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 DNM3Q9UQ16 869 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms