RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 SETD4Q9NVD3 440 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 TELO2Q9Y4R8 837 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 IGKV6D-21A0A0A0MT36 114 aa18.25■□□□□ 0.51
CD28-203ENST00000458610 TBX3O15119 743 aa18.25■□□□□ 0.51
CD28-203ENST00000458610 CAND2O75155 1236 aa18.25■□□□□ 0.51
CD28-203ENST00000458610 FGBP02675 491 aa18.25■□□□□ 0.51
CD28-203ENST00000458610 IQCF3P0C7M6 154 aa18.25■□□□□ 0.51
CD28-203ENST00000458610 SELPP16109 830 aa18.25■□□□□ 0.51
CD28-203ENST00000458610 HOXC8P31273 242 aa18.25■□□□□ 0.51
CD28-203ENST00000458610 FOSBP53539 338 aa18.25■□□□□ 0.51
CD28-203ENST00000458610 SHHQ15465 462 aa18.25■□□□□ 0.51
CD28-203ENST00000458610 SWSAP1Q6NVH7 229 aa18.25■□□□□ 0.51
CD28-203ENST00000458610 PDXDC2PQ6P474 469 aa18.25■□□□□ 0.51
CD28-203ENST00000458610 PCYT2Q99447 389 aa18.25■□□□□ 0.51
CD28-203ENST00000458610 FOXP1Q9H334 677 aaPredicted RBP18.25■□□□□ 0.51
CD28-203ENST00000458610 TRPC6Q9Y210 931 aa18.25■□□□□ 0.51
CD28-203ENST00000458610 ACTN1P12814 892 aa18.24■□□□□ 0.51
CD28-203ENST00000458610 MARK3P27448 753 aa18.24■□□□□ 0.51
CD28-203ENST00000458610 GRIK4Q16099 956 aa18.24■□□□□ 0.51
CD28-203ENST00000458610 TAF2Q6P1X5 1199 aa18.24■□□□□ 0.51
CD28-203ENST00000458610 RSPH3Q86UC2 560 aa18.24■□□□□ 0.51
CD28-203ENST00000458610 TNFRSF25Q93038 417 aa18.24■□□□□ 0.51
CD28-203ENST00000458610 RNPC3Q96LT9 517 aaKnown RBP18.24■□□□□ 0.51
CD28-203ENST00000458610 UIMC1Q96RL1 719 aa18.24■□□□□ 0.51
CD28-203ENST00000458610 WNT8AQ9H1J5 351 aa18.24■□□□□ 0.51
CD28-203ENST00000458610 DISC1Q9NRI5 854 aa18.24■□□□□ 0.51
CD28-203ENST00000458610 UMODL1Q5DID0 1318 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 POTEB3A0JP26 581 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 TREHO43280 583 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 HBP1O60381 514 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 PSMD10O75832 226 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 CKBP12277 381 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 INSRRP14616 1297 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 ZNF200P98182 395 aaPredicted RBP18.23■□□□□ 0.51
CD28-203ENST00000458610 GUCY1B3Q02153 619 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 PLCB4Q15147 1175 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 POTEBQ6S5H4 581 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 LRRC8DQ7L1W4 858 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 CKAP2LQ8IYA6 745 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 SLFN12Q8IYM2 578 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 LMBR1Q8WVP7 490 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 SCLYQ96I15 445 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 CTAGE1Q96RT6 745 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 SMC3Q9UQE7 1217 aa18.23■□□□□ 0.51
CD28-203ENST00000458610 MAFBQ9Y5Q3 323 aaPredicted RBP18.23■□□□□ 0.51
CD28-203ENST00000458610 THPOP40225 353 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 EPHB4P54760 987 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 ADAM17P78536 824 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 ZNF484Q5JVG2 852 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 TMEM240Q5SV17 173 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 C9orf50Q5SZB4 431 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 ZNF365Q70YC5 407 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 MIER3Q7Z3K6 550 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 ETNPPLQ8TBG4 499 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 ATP8B4Q8TF62 1192 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 BBXQ8WY36 941 aaPredicted RBP18.22■□□□□ 0.51
CD28-203ENST00000458610 FAM167AQ96KS9 214 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.22■□□□□ 0.51
CD28-203ENST00000458610 FTOQ9C0B1 505 aaKnown RBP eCLIP18.22■□□□□ 0.51
CD28-203ENST00000458610 NRBP2Q9NSY0 501 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 GABBR1Q9UBS5 961 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 CEP131Q9UPN4 1083 aa18.22■□□□□ 0.51
CD28-203ENST00000458610 RSPH10B2B2RC85 870 aa18.21■□□□□ 0.51
CD28-203ENST00000458610 DKC1O60832 514 aaKnown RBP eCLIP18.21■□□□□ 0.51
CD28-203ENST00000458610 CD2BP2O95400 341 aaKnown RBP18.21■□□□□ 0.51
CD28-203ENST00000458610 RSPH10BP0C881 870 aa18.21■□□□□ 0.51
CD28-203ENST00000458610 ACRP10323 421 aa18.21■□□□□ 0.51
CD28-203ENST00000458610 ORC2Q13416 577 aaPredicted RBP18.21■□□□□ 0.51
CD28-203ENST00000458610 HIC1Q14526 733 aa18.21■□□□□ 0.51
CD28-203ENST00000458610 EARS2Q5JPH6 523 aaKnown RBP18.21■□□□□ 0.51
CD28-203ENST00000458610 C16orf59Q7L2K0 433 aa18.21■□□□□ 0.51
CD28-203ENST00000458610 CCDC60Q8IWA6 550 aaPredicted RBP18.21■□□□□ 0.51
CD28-203ENST00000458610 HERVK_113Q902F9 699 aa18.21■□□□□ 0.51
CD28-203ENST00000458610 DHX38Q92620 1227 aaKnown RBP18.21■□□□□ 0.51
CD28-203ENST00000458610 UNC45AQ9H3U1 944 aa18.21■□□□□ 0.51
CD28-203ENST00000458610 KCNMB3Q9NPA1 279 aa18.21■□□□□ 0.51
CD28-203ENST00000458610 PCDH10Q9P2E7 1040 aa18.21■□□□□ 0.51
CD28-203ENST00000458610 TUBE1Q9UJT0 475 aa18.21■□□□□ 0.51
CD28-203ENST00000458610 NOL7Q9UMY1 257 aaKnown RBP18.21■□□□□ 0.51
CD28-203ENST00000458610 LTBP2Q14767 1821 aa18.21■□□□□ 0.51
CD28-203ENST00000458610 COL1A2P08123 1366 aa18.2■□□□□ 0.5
CD28-203ENST00000458610 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.2■□□□□ 0.5
CD28-203ENST00000458610 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.2■□□□□ 0.5
CD28-203ENST00000458610 MBLAC1A4D2B0 266 aaPredicted RBP18.2■□□□□ 0.5
CD28-203ENST00000458610 H3BQV1 296 aa18.2■□□□□ 0.5
CD28-203ENST00000458610 CHMP2AO43633 222 aa18.2■□□□□ 0.5
CD28-203ENST00000458610 SLC37A4O43826 429 aa18.2■□□□□ 0.5
CD28-203ENST00000458610 TRAPPC10P48553 1259 aa18.2■□□□□ 0.5
CD28-203ENST00000458610 FXR1P51114 621 aaKnown RBP eCLIP18.2■□□□□ 0.5
CD28-203ENST00000458610 IGBP1P78318 339 aa18.2■□□□□ 0.5
CD28-203ENST00000458610 TRIM71Q2Q1W2 868 aaKnown RBP18.2■□□□□ 0.5
CD28-203ENST00000458610 GPR153Q6NV75 609 aa18.2■□□□□ 0.5
CD28-203ENST00000458610 DEFB128Q7Z7B8 93 aa18.2■□□□□ 0.5
CD28-203ENST00000458610 RPAINQ86UA6 219 aa18.2■□□□□ 0.5
CD28-203ENST00000458610 GJB2P29033 226 aa18.19■□□□□ 0.5
CD28-203ENST00000458610 PPP2R5CQ13362 524 aa18.19■□□□□ 0.5
CD28-203ENST00000458610 CALCRLQ16602 461 aa18.19■□□□□ 0.5
CD28-203ENST00000458610 ZNF618Q5T7W0 954 aa18.19■□□□□ 0.5
CD28-203ENST00000458610 NOSTRINQ8IVI9 506 aa18.19■□□□□ 0.5
CD28-203ENST00000458610 NME8Q8N427 588 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms