RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 PI4K2BG5E9Z4 385 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 ENPP3O14638 875 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 FOSP01100 380 aaPredicted RBP24.64■■□□□ 1.54
CPNE1-220ENST00000458038 RXRAP19793 462 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 BMPR1AP36894 532 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 COL19A1Q14993 1142 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 UBE2SQ16763 222 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 FBXO47Q5MNV8 452 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 IER5Q5VY09 327 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 TSHZ1Q6ZSZ6 1077 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 HEATR3Q7Z4Q2 680 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 CCDC82Q8N4S0 544 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 DNAJB3Q8WWF6 145 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 JPH1Q9HDC5 661 aaPredicted RBP24.64■■□□□ 1.54
CPNE1-220ENST00000458038 RBM28Q9NW13 759 aaKnown RBP24.64■■□□□ 1.54
CPNE1-220ENST00000458038 SLC9A2Q9UBY0 812 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 HCN4Q9Y3Q4 1203 aa24.64■■□□□ 1.54
CPNE1-220ENST00000458038 MARK3P27448 753 aa24.63■■□□□ 1.53
CPNE1-220ENST00000458038 MARCH8Q5T0T0 291 aa24.63■■□□□ 1.53
CPNE1-220ENST00000458038 GJD3Q8N144 294 aa24.63■■□□□ 1.53
CPNE1-220ENST00000458038 CLP1Q92989 425 aaKnown RBP24.63■■□□□ 1.53
CPNE1-220ENST00000458038 MXRA8Q9BRK3 442 aa24.63■■□□□ 1.53
CPNE1-220ENST00000458038 FTHL17Q9BXU8 183 aa24.63■■□□□ 1.53
CPNE1-220ENST00000458038 GLT8D2Q9H1C3 349 aa24.63■■□□□ 1.53
CPNE1-220ENST00000458038 NFASCO94856 1347 aa24.62■■□□□ 1.53
CPNE1-220ENST00000458038 CTNNB1P35222 781 aa24.62■■□□□ 1.53
CPNE1-220ENST00000458038 MRPS6P82932 125 aaKnown RBP24.62■■□□□ 1.53
CPNE1-220ENST00000458038 TCEAL5Q5H9L2 206 aa24.62■■□□□ 1.53
CPNE1-220ENST00000458038 PPP1R18Q6NYC8 613 aa24.62■■□□□ 1.53
CPNE1-220ENST00000458038 MICU3Q86XE3 530 aa24.62■■□□□ 1.53
CPNE1-220ENST00000458038 ANO2Q9NQ90 1003 aa24.62■■□□□ 1.53
CPNE1-220ENST00000458038 KCNH7Q9NS40 1196 aa24.62■■□□□ 1.53
CPNE1-220ENST00000458038 CDY2AQ9Y6F7 541 aa24.62■■□□□ 1.53
CPNE1-220ENST00000458038 ADGRA3Q8IWK6 1321 aa24.61■■□□□ 1.53
CPNE1-220ENST00000458038 hCG_1642624A0A1W2PR95 340 aa24.61■■□□□ 1.53
CPNE1-220ENST00000458038 hCG_1984214I3L0E3 225 aa24.61■■□□□ 1.53
CPNE1-220ENST00000458038 M0QZ92 97 aa24.61■■□□□ 1.53
CPNE1-220ENST00000458038 INSRRP14616 1297 aa24.61■■□□□ 1.53
CPNE1-220ENST00000458038 PLPPR4Q7Z2D5 763 aa24.61■■□□□ 1.53
CPNE1-220ENST00000458038 ZNF713Q8N859 430 aaPredicted RBP24.61■■□□□ 1.53
CPNE1-220ENST00000458038 SDF4Q9BRK5 362 aa24.61■■□□□ 1.53
CPNE1-220ENST00000458038 PLVAPQ9BX97 442 aa24.61■■□□□ 1.53
CPNE1-220ENST00000458038 CD320Q9NPF0 282 aa24.61■■□□□ 1.53
CPNE1-220ENST00000458038 RIC8AQ9NPQ8 531 aa24.61■■□□□ 1.53
CPNE1-220ENST00000458038 SLC26A2P50443 739 aa24.6■■□□□ 1.53
CPNE1-220ENST00000458038 APOA5Q6Q788 366 aa24.6■■□□□ 1.53
CPNE1-220ENST00000458038 ZNF689Q96CS4 500 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-220ENST00000458038 RC3H2Q9HBD1 1191 aaKnown RBP24.6■■□□□ 1.53
CPNE1-220ENST00000458038 PKD2L1Q9P0L9 805 aa24.6■■□□□ 1.53
CPNE1-220ENST00000458038 PRKAG3Q9UGI9 489 aa24.6■■□□□ 1.53
CPNE1-220ENST00000458038 PCDHA2Q9Y5H9 948 aa24.6■■□□□ 1.53
CPNE1-220ENST00000458038 ALADP13716 330 aa24.59■■□□□ 1.53
CPNE1-220ENST00000458038 NAPAP54920 295 aa24.59■■□□□ 1.53
CPNE1-220ENST00000458038 IGBP1P78318 339 aa24.59■■□□□ 1.53
CPNE1-220ENST00000458038 IRX6P78412 446 aaPredicted RBP24.59■■□□□ 1.53
CPNE1-220ENST00000458038 BTG3Q14201 252 aaPredicted RBP24.59■■□□□ 1.53
CPNE1-220ENST00000458038 CEP55Q53EZ4 464 aa24.59■■□□□ 1.53
CPNE1-220ENST00000458038 NME8Q8N427 588 aa24.59■■□□□ 1.53
CPNE1-220ENST00000458038 KHSRPQ92945 711 aaKnown RBP eCLIP24.59■■□□□ 1.538e-8■■■□□ 15.7
CPNE1-220ENST00000458038 PCYT2Q99447 389 aa24.59■■□□□ 1.53
CPNE1-220ENST00000458038 LRRC2Q9BYS8 371 aa24.59■■□□□ 1.53
CPNE1-220ENST00000458038 TRPC6Q9Y210 931 aa24.59■■□□□ 1.53
CPNE1-220ENST00000458038 LOXHD1Q8IVV2 1947 aa24.59■■□□□ 1.53
CPNE1-220ENST00000458038 RBAK-RBAKDNI3L0D1 243 aa24.58■■□□□ 1.53
CPNE1-220ENST00000458038 DGKIO75912 1065 aa24.58■■□□□ 1.53
CPNE1-220ENST00000458038 LINC00271P0C7V0 271 aa24.58■■□□□ 1.53
CPNE1-220ENST00000458038 IL9P15248 144 aa24.58■■□□□ 1.53
CPNE1-220ENST00000458038 SSTR3P32745 418 aaPredicted RBP24.58■■□□□ 1.53
CPNE1-220ENST00000458038 STAT5BP51692 787 aa24.58■■□□□ 1.53
CPNE1-220ENST00000458038 ACTR2P61160 394 aa24.58■■□□□ 1.53
CPNE1-220ENST00000458038 COL9A3Q14050 684 aaPredicted RBP24.58■■□□□ 1.53
CPNE1-220ENST00000458038 NAALADL2Q58DX5 795 aa24.58■■□□□ 1.53
CPNE1-220ENST00000458038 WWC2Q6AWC2 1192 aa24.58■■□□□ 1.53
CPNE1-220ENST00000458038 RAB11FIP4Q86YS3 637 aa24.58■■□□□ 1.53
CPNE1-220ENST00000458038 NEK1Q96PY6 1258 aa24.58■■□□□ 1.53
CPNE1-220ENST00000458038 CNTNAP5Q8WYK1 1306 aa24.58■■□□□ 1.52
CPNE1-220ENST00000458038 H3BQ06 376 aaPredicted RBP24.57■■□□□ 1.52
CPNE1-220ENST00000458038 STAG3L1P0CL83 205 aa24.57■■□□□ 1.52
CPNE1-220ENST00000458038 ADCY7P51828 1080 aa24.57■■□□□ 1.52
CPNE1-220ENST00000458038 AP3B2Q13367 1082 aa24.57■■□□□ 1.52
CPNE1-220ENST00000458038 NIPA1Q7RTP0 329 aa24.57■■□□□ 1.52
CPNE1-220ENST00000458038 P2RX5Q93086 422 aa24.57■■□□□ 1.52
CPNE1-220ENST00000458038 FAM49AQ9H0Q0 323 aaPredicted RBP24.57■■□□□ 1.52
CPNE1-220ENST00000458038 CLDND1Q9NY35 253 aa24.57■■□□□ 1.52
CPNE1-220ENST00000458038 TRPV2Q9Y5S1 764 aa24.57■■□□□ 1.52
CPNE1-220ENST00000458038 SMIM35A0A1B0GVV1 85 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 MEIS1O00470 390 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 ZBTB43O43298 467 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 ATG7O95352 703 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 CD52P31358 61 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 RCAN1P53805 252 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 EXOSC10Q01780 885 aaKnown RBP24.56■■□□□ 1.52
CPNE1-220ENST00000458038 PLCB4Q15147 1175 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 RTN1Q16799 776 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 CTC1Q2NKJ3 1217 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 TSGA10IPQ3SY00 556 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 BMP2KLQ5H9B9 411 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 EP400NLQ6ZTU2 488 aa24.56■■□□□ 1.52
CPNE1-220ENST00000458038 DHX32Q7L7V1 743 aaKnown RBP24.56■■□□□ 1.52
CPNE1-220ENST00000458038 NPAS4Q8IUM7 802 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms