RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 RIC8AQ9NPQ8 531 aa6.26□□□□□ -1.41
VPS41-209ENST00000457055 CRTAC1Q9NQ79 661 aa6.26□□□□□ -1.41
VPS41-209ENST00000457055 XPO7Q9UIA9 1087 aaKnown RBP6.26□□□□□ -1.41
VPS41-209ENST00000457055 MBD1Q9UIS9 605 aaPredicted RBP6.26□□□□□ -1.41
VPS41-209ENST00000457055 GTF2A1LQ9UNN4 478 aa6.26□□□□□ -1.41
VPS41-209ENST00000457055 ATP10BO94823 1461 aa6.26□□□□□ -1.41
VPS41-209ENST00000457055 TMEM82A0PJX8 343 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 HRKO00198 91 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 PRAMEF1O95521 474 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 SYPP08247 313 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 ATF3P18847 181 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 PI3P19957 117 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 HOXC13P31276 330 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 SNX16P57768 344 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 EXOSC10Q01780 885 aaKnown RBP6.25□□□□□ -1.41
VPS41-209ENST00000457055 NUCB1Q02818 461 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 BIRC3Q13489 604 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 BBS9Q3SYG4 887 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 PARP10Q53GL7 1025 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 TSHZ3Q63HK5 1081 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 ZCCHC8Q6NZY4 707 aaKnown RBP6.25□□□□□ -1.41
VPS41-209ENST00000457055 FBXL19Q6PCT2 694 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 KSR2Q6VAB6 950 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 ERMP1Q7Z2K6 904 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 SNX32Q86XE0 403 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 TMEM151BQ8IW70 566 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 LINC00116Q8NCU8 138 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 APPL2Q8NEU8 664 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 GIMAP1Q8WWP7 306 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 TAF4BQ92750 862 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 SKA1Q96BD8 255 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 HHIPL1Q96JK4 782 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 SPAG5Q96R06 1193 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 LZTS2Q9BRK4 669 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 PTPRHQ9HD43 1115 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 COPRSQ9NQ92 184 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 METTL5Q9NRN9 209 aaKnown RBP6.25□□□□□ -1.41
VPS41-209ENST00000457055 SIRT5Q9NXA8 310 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 INPP5FQ9Y2H2 1132 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.25□□□□□ -1.41
VPS41-209ENST00000457055 PAXBP1Q9Y5B6 917 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 SUPT16HQ9Y5B9 1047 aaKnown RBP6.25□□□□□ -1.41
VPS41-209ENST00000457055 IRAK3Q9Y616 596 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 CFAP65Q6ZU64 1925 aaKnown RBP6.25□□□□□ -1.41
VPS41-209ENST00000457055 UGGT2Q9NYU1 1516 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 FHOD3Q2V2M9 1422 aa6.25□□□□□ -1.41
VPS41-209ENST00000457055 ROBO2Q9HCK4 1378 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 IQCA1LA6NCM1 817 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 KIAA0754O94854 1291 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 SRGNP10124 158 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 SKILP12757 684 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 IDEP14735 1019 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 GPSM2P81274 684 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 PDE1CQ14123 709 aaPredicted RBP6.24□□□□□ -1.41
VPS41-209ENST00000457055 MORC3Q14149 939 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 RASA3Q14644 834 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 SEPT7Q16181 437 aaKnown RBP6.24□□□□□ -1.41
VPS41-209ENST00000457055 NFE2Q16621 373 aaPredicted RBP6.24□□□□□ -1.41
VPS41-209ENST00000457055 AMOTQ4VCS5 1084 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 ZPBP2Q6X784 338 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 C17orf50Q8WW18 174 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 TBC1D20Q96BZ9 403 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 SIGLEC10Q96LC7 697 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 KCNC2Q96PR1 638 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 RWDD1Q9H446 243 aaPredicted RBP6.24□□□□□ -1.41
VPS41-209ENST00000457055 KCNQ5Q9NR82 932 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 DIAPH3Q9NSV4 1193 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 HOXC10Q9NYD6 342 aa6.24□□□□□ -1.41
VPS41-209ENST00000457055 SHTN1A0MZ66 631 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 SMTNL1A8MU46 457 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 FAM25EA8MYX2 175 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 CPLX1O14810 134 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 SIGLEC6O43699 453 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 TRIM13O60858 407 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 CLEC3AO75596 197 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 ATE1O95260 518 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 XBP1P17861 261 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 SDHBP21912 280 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 STIP1P31948 543 aaKnown RBP6.23□□□□□ -1.41
VPS41-209ENST00000457055 EIF4A3P38919 411 aaKnown RBP6.23□□□□□ -1.41
VPS41-209ENST00000457055 MAGEA8P43361 318 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 EPHB3P54753 998 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 FANCCQ00597 558 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 WDR45BQ5MNZ6 344 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 CDCP2Q5VXM1 449 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 ANO1Q5XXA6 986 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 VPS37DQ86XT2 251 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 PGBD4Q96DM1 585 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 FCRL2Q96LA5 508 aaPredicted RBP6.23□□□□□ -1.41
VPS41-209ENST00000457055 RMDN2Q96LZ7 410 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 NCAPGQ9BPX3 1015 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 PRDM14Q9GZV8 571 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 DONSONQ9NYP3 566 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 EFCAB5A4FU69 1503 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 STRCP1A6NGW2 1772 aa6.23□□□□□ -1.41
VPS41-209ENST00000457055 ATP10AO60312 1499 aa6.22□□□□□ -1.41
VPS41-209ENST00000457055 ZMYM4Q5VZL5 1548 aa6.22□□□□□ -1.41
VPS41-209ENST00000457055 A0A0G2JLL6 359 aaPredicted RBP6.22□□□□□ -1.41
VPS41-209ENST00000457055 C19orf81C9J6K1 198 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms