RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 UBIAD1Q9Y5Z9 338 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 ERICH2A1L162 156 aa13.69□□□□□ -0.22
LMCD1-206ENST00000456506 LINC01565O15544 149 aa13.69□□□□□ -0.22
LMCD1-206ENST00000456506 MBTPS2O43462 519 aa13.69□□□□□ -0.22
LMCD1-206ENST00000456506 DDAH1O94760 285 aa13.69□□□□□ -0.22
LMCD1-206ENST00000456506 MMP1P03956 469 aa13.69□□□□□ -0.22
LMCD1-206ENST00000456506 PPFIA1Q13136 1202 aa13.69□□□□□ -0.22
LMCD1-206ENST00000456506 GRIK4Q16099 956 aa13.69□□□□□ -0.22
LMCD1-206ENST00000456506 CATIPQ7Z7H3 387 aa13.69□□□□□ -0.22
LMCD1-206ENST00000456506 GIMAP8Q8ND71 665 aaPredicted RBP13.69□□□□□ -0.22
LMCD1-206ENST00000456506 SMARCC2Q8TAQ2 1214 aa13.69□□□□□ -0.22
LMCD1-206ENST00000456506 DNAJB3Q8WWF6 145 aa13.69□□□□□ -0.22
LMCD1-206ENST00000456506 C11orf84Q9BUA3 381 aaPredicted RBP13.69□□□□□ -0.22
LMCD1-206ENST00000456506 ERAP1Q9NZ08 941 aa13.69□□□□□ -0.22
LMCD1-206ENST00000456506 TUBE1Q9UJT0 475 aa13.69□□□□□ -0.22
LMCD1-206ENST00000456506 CDY2AQ9Y6F7 541 aa13.69□□□□□ -0.22
LMCD1-206ENST00000456506 TSHZ1Q6ZSZ6 1077 aa13.68□□□□□ -0.22
LMCD1-206ENST00000456506 RALYLQ86SE5 291 aaKnown RBP13.68□□□□□ -0.22
LMCD1-206ENST00000456506 NLRX1Q86UT6 975 aa13.68□□□□□ -0.22
LMCD1-206ENST00000456506 SEPT1Q8WYJ6 367 aa13.68□□□□□ -0.22
LMCD1-206ENST00000456506 P2RX5Q93086 422 aa13.68□□□□□ -0.22
LMCD1-206ENST00000456506 RRP36Q96EU6 259 aaKnown RBP13.68□□□□□ -0.22
LMCD1-206ENST00000456506 MSLNLQ96KJ4 702 aa13.68□□□□□ -0.22
LMCD1-206ENST00000456506 MTA3Q9BTC8 594 aa13.68□□□□□ -0.22
LMCD1-206ENST00000456506 RWDD3Q9Y3V2 267 aa13.68□□□□□ -0.22
LMCD1-206ENST00000456506 MRPL42Q9Y6G3 142 aaKnown RBP13.68□□□□□ -0.22
LMCD1-206ENST00000456506 SH2B2O14492 632 aaPredicted RBP13.67□□□□□ -0.22
LMCD1-206ENST00000456506 NCK2O43639 380 aa13.67□□□□□ -0.22
LMCD1-206ENST00000456506 MARK3P27448 753 aa13.67□□□□□ -0.22
LMCD1-206ENST00000456506 MRPS6P82932 125 aaKnown RBP13.67□□□□□ -0.22
LMCD1-206ENST00000456506 ADAM15Q13444 863 aa13.67□□□□□ -0.22
LMCD1-206ENST00000456506 SART3Q15020 963 aaKnown RBP13.67□□□□□ -0.22
LMCD1-206ENST00000456506 UBE2SQ16763 222 aa13.67□□□□□ -0.22
LMCD1-206ENST00000456506 ADGRD2Q7Z7M1 963 aa13.67□□□□□ -0.22
LMCD1-206ENST00000456506 CMTR1Q8N1G2 835 aaKnown RBP13.67□□□□□ -0.22
LMCD1-206ENST00000456506 RUFY2Q8WXA3 655 aa13.67□□□□□ -0.22
LMCD1-206ENST00000456506 PLVAPQ9BX97 442 aa13.67□□□□□ -0.22
LMCD1-206ENST00000456506 ALG13Q9NP73 1137 aaKnown RBP13.67□□□□□ -0.22
LMCD1-206ENST00000456506 JADE2Q9NQC1 790 aa13.67□□□□□ -0.22
LMCD1-206ENST00000456506 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
LMCD1-206ENST00000456506 SQORQ9Y6N5 450 aa13.67□□□□□ -0.22
LMCD1-206ENST00000456506 PLXNA3P51805 1871 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 EYA4O95677 639 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 INSRRP14616 1297 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 CD52P31358 61 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 NHLH1Q02575 133 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 SMAD4Q13485 552 aaKnown RBP13.66□□□□□ -0.22
LMCD1-206ENST00000456506 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
LMCD1-206ENST00000456506 HERC4Q5GLZ8 1057 aaPredicted RBP13.66□□□□□ -0.22
LMCD1-206ENST00000456506 HFE2Q6ZVN8 426 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 ALYREFQ86V81 257 aaKnown RBP13.66□□□□□ -0.22
LMCD1-206ENST00000456506 CMTR2Q8IYT2 770 aaKnown RBP13.66□□□□□ -0.22
LMCD1-206ENST00000456506 CTCFLQ8NI51 663 aaPredicted RBP13.66□□□□□ -0.22
LMCD1-206ENST00000456506 CUL5Q93034 780 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 CDHR1Q96JP9 859 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 FBXL18Q96ME1 805 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 LZTS2Q9BRK4 669 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 TMX1Q9H3N1 280 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 SMARCAD1Q9H4L7 1026 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 CLEC1BQ9P126 229 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 FAM50BQ9Y247 325 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 RBM8AQ9Y5S9 174 aaKnown RBP13.66□□□□□ -0.22
LMCD1-206ENST00000456506 MYO15AQ9UKN7 3530 aa13.66□□□□□ -0.22
LMCD1-206ENST00000456506 IGSF9BQ9UPX0 1349 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 DENND4AQ7Z401 1863 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 PRC1O43663 620 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 GLP2RO95838 553 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 ITGB1P05556 798 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 RXRAP19793 462 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 KIF5BP33176 963 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 LIFRP42702 1097 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 MTMR1Q13613 665 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 CLUL1Q15846 466 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 TYW1BQ6NUM6 668 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 CYP2W1Q8TAV3 490 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 SPPL3Q8TCT6 385 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 TRAPPC12Q8WVT3 735 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 KCNH6Q9H252 994 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 PSTPIP2Q9H939 334 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 PKD2L1Q9P0L9 805 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 MUTYHQ9UIF7 546 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 PCDHA6Q9UN73 950 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 PCDHA8Q9Y5H6 950 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 PCDHA2Q9Y5H9 948 aa13.65□□□□□ -0.22
LMCD1-206ENST00000456506 KDM3AQ9Y4C1 1321 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 IGKV6D-21A0A0A0MT36 114 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 hCG_1642624A0A1W2PR95 340 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 MAFGO15525 162 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 GATMP50440 423 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 ITGB3BPQ13352 177 aaPredicted RBP13.64□□□□□ -0.23
LMCD1-206ENST00000456506 PLCB4Q15147 1175 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 NAALADL2Q58DX5 795 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 EP400NLQ6ZTU2 488 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 TMTC3Q6ZXV5 915 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 RSPH3Q86UC2 560 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 RNF135Q8IUD6 432 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 NPAS4Q8IUM7 802 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 GLG1Q92896 1179 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 LSG1Q9H089 658 aaKnown RBP13.64□□□□□ -0.23
LMCD1-206ENST00000456506 JPH1Q9HDC5 661 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms