RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 CIITAP33076 1130 aa22.11■■□□□ 1.13
CSPG5-203ENST00000456150 POLR2FP61218 127 aaKnown RBP22.11■■□□□ 1.13
CSPG5-203ENST00000456150 RAD51AP2Q09MP3 1159 aa22.11■■□□□ 1.13
CSPG5-203ENST00000456150 USH1GQ495M9 461 aa22.11■■□□□ 1.13
CSPG5-203ENST00000456150 BTNL9Q6UXG8 535 aa22.11■■□□□ 1.13
CSPG5-203ENST00000456150 LENG9Q96B70 501 aa22.11■■□□□ 1.13
CSPG5-203ENST00000456150 CALCOCO1Q9P1Z2 691 aa22.11■■□□□ 1.13
CSPG5-203ENST00000456150 SYNPO2Q9UMS6 1093 aa22.11■■□□□ 1.13
CSPG5-203ENST00000456150 COL2A1P02458 1487 aaPredicted RBP22.11■■□□□ 1.13
CSPG5-203ENST00000456150 LRRIQ3A6PVS8 624 aaPredicted RBP22.11■■□□□ 1.13
CSPG5-203ENST00000456150 GIT2Q14161 759 aa22.11■■□□□ 1.13
CSPG5-203ENST00000456150 RBM26Q5T8P6 1007 aaKnown RBP22.11■■□□□ 1.13
CSPG5-203ENST00000456150 CCDC102AQ96A19 550 aa22.11■■□□□ 1.13
CSPG5-203ENST00000456150 OSBPL9Q96SU4 736 aa22.11■■□□□ 1.13
CSPG5-203ENST00000456150 P2RX7Q99572 595 aaKnown RBP22.11■■□□□ 1.13
CSPG5-203ENST00000456150 ZNF277Q9NRM2 450 aaPredicted RBP22.11■■□□□ 1.13
CSPG5-203ENST00000456150 VPS18Q9P253 973 aa22.11■■□□□ 1.13
CSPG5-203ENST00000456150 TRAF3IP3Q9Y228 551 aa22.11■■□□□ 1.13
CSPG5-203ENST00000456150 YDJCA8MPS7 323 aa22.1■■□□□ 1.13
CSPG5-203ENST00000456150 C2orf54Q08AI8 447 aa22.1■■□□□ 1.13
CSPG5-203ENST00000456150 RTKN2Q8IZC4 609 aa22.1■■□□□ 1.13
CSPG5-203ENST00000456150 KCTD17Q8N5Z5 321 aa22.1■■□□□ 1.13
CSPG5-203ENST00000456150 SUPT20HQ8NEM7 779 aa22.1■■□□□ 1.13
CSPG5-203ENST00000456150 DRC1Q96MC2 740 aa22.1■■□□□ 1.13
CSPG5-203ENST00000456150 SPATA31C1P0DKV0 1188 aa22.1■■□□□ 1.13
CSPG5-203ENST00000456150 NR2F2P24468 414 aa22.1■■□□□ 1.13
CSPG5-203ENST00000456150 TNNT3P45378 269 aaPredicted RBP22.1■■□□□ 1.13
CSPG5-203ENST00000456150 SNAP25P60880 206 aa22.1■■□□□ 1.13
CSPG5-203ENST00000456150 RASSF7Q02833 373 aa22.1■■□□□ 1.13
CSPG5-203ENST00000456150 TRAF1Q13077 416 aa22.1■■□□□ 1.13
CSPG5-203ENST00000456150 FRMD5Q7Z6J6 570 aa22.1■■□□□ 1.13
CSPG5-203ENST00000456150 TEX2Q8IWB9 1127 aa22.1■■□□□ 1.13
CSPG5-203ENST00000456150 COL4A5P29400 1685 aa22.09■■□□□ 1.13
CSPG5-203ENST00000456150 FAM86B1E9PN63 330 aa22.09■■□□□ 1.13
CSPG5-203ENST00000456150 TLR2O60603 784 aa22.09■■□□□ 1.13
CSPG5-203ENST00000456150 FAM86B2P0C5J1 330 aa22.09■■□□□ 1.13
CSPG5-203ENST00000456150 PABPC4Q13310 644 aaKnown RBP eCLIP22.09■■□□□ 1.13
CSPG5-203ENST00000456150 KNOP1Q1ED39 458 aaKnown RBP22.09■■□□□ 1.13
CSPG5-203ENST00000456150 CCDC181Q5TID7 509 aa22.09■■□□□ 1.13
CSPG5-203ENST00000456150 REEP2Q9BRK0 252 aa22.09■■□□□ 1.13
CSPG5-203ENST00000456150 CALUO43852 315 aaPredicted RBP22.08■■□□□ 1.13
CSPG5-203ENST00000456150 GH2P01242 217 aa22.08■■□□□ 1.13
CSPG5-203ENST00000456150 CYP3A4P08684 503 aa22.08■■□□□ 1.13
CSPG5-203ENST00000456150 KCNH2Q12809 1159 aa22.08■■□□□ 1.13
CSPG5-203ENST00000456150 EPM2AIP1Q7L775 607 aaPredicted RBP22.08■■□□□ 1.13
CSPG5-203ENST00000456150 CRACR2AQ9BSW2 395 aa22.08■■□□□ 1.13
CSPG5-203ENST00000456150 POLR3CQ9BUI4 534 aaPredicted RBP22.08■■□□□ 1.13
CSPG5-203ENST00000456150 AIPL1Q9NZN9 384 aa22.08■■□□□ 1.13
CSPG5-203ENST00000456150 PIK3CDO00329 1044 aa22.08■■□□□ 1.12
CSPG5-203ENST00000456150 PAFAH1B1P43034 410 aa22.08■■□□□ 1.12
CSPG5-203ENST00000456150 AARSP49588 968 aaKnown RBP eCLIP22.08■■□□□ 1.12
CSPG5-203ENST00000456150 PSMC6P62333 389 aa22.08■■□□□ 1.12
CSPG5-203ENST00000456150 RAPGEF1Q13905 1077 aa22.08■■□□□ 1.12
CSPG5-203ENST00000456150 ASIC2Q16515 512 aa22.08■■□□□ 1.12
CSPG5-203ENST00000456150 CCNI2Q6ZMN8 369 aaPredicted RBP22.08■■□□□ 1.12
CSPG5-203ENST00000456150 SFR1Q86XK3 245 aa22.08■■□□□ 1.12
CSPG5-203ENST00000456150 COG1Q8WTW3 980 aa22.08■■□□□ 1.12
CSPG5-203ENST00000456150 PSMD1Q99460 953 aa22.08■■□□□ 1.12
CSPG5-203ENST00000456150 HDAC9Q9UKV0 1011 aa22.08■■□□□ 1.12
CSPG5-203ENST00000456150 BRCA1P38398 1863 aaKnown RBP22.07■■□□□ 1.12
CSPG5-203ENST00000456150 MEIS1O00470 390 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 PDXKO00764 312 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 MSH4O15457 936 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 N4BP1O75113 896 aaKnown RBP22.07■■□□□ 1.12
CSPG5-203ENST00000456150 ZNF76P36508 570 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 GYS2P54840 703 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 SLC18A3Q16572 532 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 DALRD3Q5D0E6 543 aaKnown RBP22.07■■□□□ 1.12
CSPG5-203ENST00000456150 NFRKBQ6P4R8 1299 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 GPIHBP1Q8IV16 184 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 SPATA4Q8NEY3 305 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 GANQ9H2C0 597 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 TDRD3Q9H7E2 651 aaKnown RBP22.07■■□□□ 1.12
CSPG5-203ENST00000456150 ARMCX3Q9UH62 379 aaPredicted RBP22.07■■□□□ 1.12
CSPG5-203ENST00000456150 SALL4Q9UJQ4 1053 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 VAV3Q9UKW4 847 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 FAN1Q9Y2M0 1017 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 CASP5P51878 434 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 NAP1L1P55209 391 aaKnown RBP22.07■■□□□ 1.12
CSPG5-203ENST00000456150 RNF14Q9UBS8 474 aa22.07■■□□□ 1.12
CSPG5-203ENST00000456150 A0A0U1RQG5 324 aaPredicted RBP22.06■■□□□ 1.12
CSPG5-203ENST00000456150 TBCAO75347 108 aaKnown RBP22.06■■□□□ 1.12
CSPG5-203ENST00000456150 KLHL30Q0D2K2 578 aa22.06■■□□□ 1.12
CSPG5-203ENST00000456150 BMT2Q1RMZ1 405 aa22.06■■□□□ 1.12
CSPG5-203ENST00000456150 KLHDC7AQ5VTJ3 777 aa22.06■■□□□ 1.12
CSPG5-203ENST00000456150 ANKRD13CQ8N6S4 541 aa22.06■■□□□ 1.12
CSPG5-203ENST00000456150 PLCB1Q9NQ66 1216 aa22.06■■□□□ 1.12
CSPG5-203ENST00000456150 HPCAL4Q9UM19 191 aa22.06■■□□□ 1.12
CSPG5-203ENST00000456150 OPLAHO14841 1288 aa22.05■■□□□ 1.12
CSPG5-203ENST00000456150 EYA4O95677 639 aa22.05■■□□□ 1.12
CSPG5-203ENST00000456150 AFPP02771 609 aaKnown RBP22.05■■□□□ 1.12
CSPG5-203ENST00000456150 LMAN1P49257 510 aa22.05■■□□□ 1.12
CSPG5-203ENST00000456150 NAB2Q15742 525 aa22.05■■□□□ 1.12
CSPG5-203ENST00000456150 GRIPAP1Q4V328 841 aa22.05■■□□□ 1.12
CSPG5-203ENST00000456150 TBC1D5Q92609 795 aa22.05■■□□□ 1.12
CSPG5-203ENST00000456150 CSRNP1Q96S65 589 aa22.05■■□□□ 1.12
CSPG5-203ENST00000456150 TLR10Q9BXR5 811 aa22.05■■□□□ 1.12
CSPG5-203ENST00000456150 TYW1Q9NV66 732 aaKnown RBP22.05■■□□□ 1.12
CSPG5-203ENST00000456150 HERC5Q9UII4 1024 aaKnown RBP22.05■■□□□ 1.12
CSPG5-203ENST00000456150 PRR12Q9ULL5 1215 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms