RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 PRRC2BQ5JSZ5 2229 aaKnown RBP13.71□□□□□ -0.21
USP40-210ENST00000454354 IGKV6D-21A0A0A0MT36 114 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 DHX15O43143 795 aaKnown RBP13.71□□□□□ -0.21
USP40-210ENST00000454354 CA3P07451 260 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 CIITAP33076 1130 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 ZNF76P36508 570 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 ACTR2P61160 394 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 DEFB103AP81534 67 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 SETQ01105 290 aaPredicted RBP13.71□□□□□ -0.21
USP40-210ENST00000454354 IKBKEQ14164 716 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 GRIK4Q16099 956 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 PLEKHG4Q58EX7 1191 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 MARCH8Q5T0T0 291 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 TAF2Q6P1X5 1199 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 PLPPR4Q7Z2D5 763 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 TRIM22Q8IYM9 498 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 GLG1Q92896 1179 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 PDRG1Q9NUG6 133 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 TUBE1Q9UJT0 475 aa13.71□□□□□ -0.21
USP40-210ENST00000454354 TTC28Q96AY4 2481 aa13.7□□□□□ -0.22
USP40-210ENST00000454354 TTC3P53804 2025 aa13.7□□□□□ -0.22
USP40-210ENST00000454354 KIF28PB7ZC32 967 aa13.7□□□□□ -0.22
USP40-210ENST00000454354 PPFIA3O75145 1194 aa13.7□□□□□ -0.22
USP40-210ENST00000454354 DEXIO95424 95 aa13.7□□□□□ -0.22
USP40-210ENST00000454354 CCNE2O96020 404 aa13.7□□□□□ -0.22
USP40-210ENST00000454354 MARK3P27448 753 aa13.7□□□□□ -0.22
USP40-210ENST00000454354 SSRP1Q08945 709 aaKnown RBP13.7□□□□□ -0.22
USP40-210ENST00000454354 ADGRE1Q14246 886 aa13.7□□□□□ -0.22
USP40-210ENST00000454354 RUFY4Q6ZNE9 571 aa13.7□□□□□ -0.22
USP40-210ENST00000454354 PLA2G4DQ86XP0 818 aa13.7□□□□□ -0.22
USP40-210ENST00000454354 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
USP40-210ENST00000454354 DBF4BQ8NFT6 615 aa13.7□□□□□ -0.22
USP40-210ENST00000454354 AZI2Q9H6S1 392 aa13.7□□□□□ -0.22
USP40-210ENST00000454354 VPS54Q9P1Q0 977 aa13.7□□□□□ -0.22
USP40-210ENST00000454354 RRN3P2A6NIE6 340 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 IPO5O00410 1097 aaKnown RBP13.69□□□□□ -0.22
USP40-210ENST00000454354 CPLX1O14810 134 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 TLL1O43897 1013 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 GJB5O95377 273 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 RPLP2P05387 115 aaKnown RBP13.69□□□□□ -0.22
USP40-210ENST00000454354 CTSHP09668 335 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 SLC26A2P50443 739 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 STAT5BP51692 787 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 MGAT3Q09327 533 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 PLCB4Q15147 1175 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 ABHD15Q6UXT9 468 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 RASGRP4Q8TDF6 673 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 TNPO1Q92973 898 aaKnown RBP13.69□□□□□ -0.22
USP40-210ENST00000454354 LENG9Q96B70 501 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 TBC1D22BQ9NU19 505 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 NCOR1O75376 2440 aa13.69□□□□□ -0.22
USP40-210ENST00000454354 ATG2AQ2TAZ0 1938 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 M0R2N6 131 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 EDIL3O43854 480 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 EIF5BO60841 1220 aaKnown RBP13.68□□□□□ -0.22
USP40-210ENST00000454354 ARHGEF15O94989 841 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 INSRRP14616 1297 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 TAP1Q03518 808 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 NPY5RQ15761 445 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 CPLX2Q6PUV4 134 aaKnown RBP13.68□□□□□ -0.22
USP40-210ENST00000454354 RSPH3Q86UC2 560 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 USP38Q8NB14 1042 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 DAGLBQ8NCG7 672 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 SEPT8Q92599 483 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 APBB2Q92870 758 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 LARP6Q9BRS8 491 aaKnown RBP13.68□□□□□ -0.22
USP40-210ENST00000454354 ZNF577Q9BSK1 485 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 OSBPL7Q9BZF2 842 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 PCDHA4Q9UN74 947 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 KIAA1671Q9BY89 1806 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 BRWD1Q9NSI6 2320 aa13.68□□□□□ -0.22
USP40-210ENST00000454354 STK36Q9NRP7 1315 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 RBAK-RBAKDNI3L0D1 243 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 DDX39AO00148 427 aaKnown RBP13.67□□□□□ -0.22
USP40-210ENST00000454354 PFKFB2O60825 505 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 CDKL5O76039 1030 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 CHRNA1P02708 482 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 AMHP03971 560 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 POU3F3P20264 500 aaPredicted RBP13.67□□□□□ -0.22
USP40-210ENST00000454354 USP11P51784 963 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 NLRP5P59047 1200 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 KRT76Q01546 638 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 SCRN1Q12765 414 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 STK3Q13188 491 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 FAM160B1Q5W0V3 765 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 ZNF746Q6NUN9 644 aaPredicted RBP13.67□□□□□ -0.22
USP40-210ENST00000454354 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.67□□□□□ -0.22
USP40-210ENST00000454354 TMCO2Q7Z6W1 182 aaPredicted RBP13.67□□□□□ -0.22
USP40-210ENST00000454354 CCDC60Q8IWA6 550 aaPredicted RBP13.67□□□□□ -0.22
USP40-210ENST00000454354 SMAP1Q8IYB5 467 aaPredicted RBP13.67□□□□□ -0.22
USP40-210ENST00000454354 RAD9AQ99638 391 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 C22orf23Q9BZE7 217 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 TPCN1Q9ULQ1 816 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 TRPC6Q9Y210 931 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 PCDHA2Q9Y5H9 948 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 COL1A2P08123 1366 aa13.67□□□□□ -0.22
USP40-210ENST00000454354 POTEB3A0JP26 581 aa13.66□□□□□ -0.22
USP40-210ENST00000454354 LCHNA4D1U4 455 aa13.66□□□□□ -0.22
USP40-210ENST00000454354 IGBP1P78318 339 aa13.66□□□□□ -0.22
USP40-210ENST00000454354 MRPS6P82932 125 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms