RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 TUBE1Q9UJT0 475 aa10.15□□□□□ -0.78
DEPDC1B-202ENST00000453022 UBIAD1Q9Y5Z9 338 aa10.15□□□□□ -0.78
DEPDC1B-202ENST00000453022 MYH9P35579 1960 aaKnown RBP10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 GRM6O15303 877 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 SSTR3P32745 418 aaPredicted RBP10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 LTBRP36941 435 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 ZP2Q05996 745 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 MTMR1Q13613 665 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 PUS10Q3MIT2 529 aaKnown RBP10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 FBXO47Q5MNV8 452 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 CASC1Q6TDU7 716 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 DNAJB3Q8WWF6 145 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 SEPT1Q8WYJ6 367 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 CLP1Q92989 425 aaKnown RBP10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 ZNF689Q96CS4 500 aaPredicted RBP10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 PCYT2Q99447 389 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 LZTS2Q9BRK4 669 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 MTA3Q9BTC8 594 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 PSTPIP2Q9H939 334 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 AGO3Q9H9G7 860 aaKnown RBP10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 ERAP1Q9NZ08 941 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 CDY2AQ9Y6F7 541 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 ZNF318Q5VUA4 2279 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 POTEB3A0JP26 581 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 PRR33A8MZF0 331 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 ENPP3O14638 875 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 MCM5P33992 734 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 BMPR1AP36894 532 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 GNAQP50148 359 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 DLX2Q07687 328 aaPredicted RBP10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 HYAL1Q12794 435 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 CTC1Q2NKJ3 1217 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 POTEBQ6S5H4 581 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 NFXL1Q6ZNB6 911 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 TSHZ1Q6ZSZ6 1077 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 CRIPAKQ8N1N5 446 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 CDHR1Q96JP9 859 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 TMEM87BQ96K49 555 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 LSG1Q9H089 658 aaKnown RBP10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 CLDND1Q9NY35 253 aa10.14□□□□□ -0.79
DEPDC1B-202ENST00000453022 USP34Q70CQ2 3546 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 CCDC69A6NI79 296 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 SLC27A2O14975 620 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 DGKIO75912 1065 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 RB1P06400 928 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 CD52P31358 61 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 LIFRP42702 1097 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 IGBP1P78318 339 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 MRPS6P82932 125 aaKnown RBP10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 CAMK1Q14012 370 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 EP400NLQ6ZTU2 488 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 TMTC3Q6ZXV5 915 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 CCDC82Q8N4S0 544 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 GLG1Q92896 1179 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 C11orf84Q9BUA3 381 aaPredicted RBP10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 LRRC2Q9BYS8 371 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 FAM49AQ9H0Q0 323 aaPredicted RBP10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 LMAN2LQ9H0V9 348 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 SMARCAD1Q9H4L7 1026 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 JADE2Q9NQC1 790 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 PCDHA6Q9UN73 950 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 PCDHA8Q9Y5H6 950 aa10.13□□□□□ -0.79
DEPDC1B-202ENST00000453022 C19orf67A6NJJ6 358 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 SPDYE3A6NKU9 549 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 TBX10O75333 385 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 CSPG5O95196 566 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 MMP1P03956 469 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 CALM1P0DP23 149 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 CALM2P0DP24 149 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 CALM3P0DP25 149 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 INSRRP14616 1297 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 GTF2F1P35269 517 aaKnown RBP eCLIP10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 IRX6P78412 446 aaPredicted RBP10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 BTG3Q14201 252 aaPredicted RBP10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 TYW1BQ6NUM6 668 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 HEATR3Q7Z4Q2 680 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 RSPH3Q86UC2 560 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 RTN4RL1Q86UN2 441 aaPredicted RBP10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 CYP2W1Q8TAV3 490 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 TRAPPC12Q8WVT3 735 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 JPH1Q9HDC5 661 aaPredicted RBP10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 SLC9A2Q9UBY0 812 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 RWDD3Q9Y3V2 267 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 MRPL42Q9Y6G3 142 aaKnown RBP10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 CNTNAP5Q8WYK1 1306 aa10.12□□□□□ -0.79
DEPDC1B-202ENST00000453022 IGSF9BQ9UPX0 1349 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 LINC01565O15544 149 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 DCXO43602 365 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 ALADP13716 330 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 DNAJB1P25685 340 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 TMEM62Q0P6H9 643 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 PLCB4Q15147 1175 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 NECTIN1Q15223 517 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 CLUL1Q15846 466 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 CREB3L3Q68CJ9 461 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 WWC2Q6AWC2 1192 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 MICU3Q86XE3 530 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 ADHFE1Q8IWW8 467 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 TMTC2Q8N394 836 aa10.11□□□□□ -0.79
DEPDC1B-202ENST00000453022 FANCBQ8NB91 859 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms