RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 RTN4RL1Q86UN2 441 aaPredicted RBP8.39□□□□□ -1.07
HDLBP-222ENST00000449504 TRIM50Q86XT4 487 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 NPAS4Q8IUM7 802 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 THNSL1Q8IYQ7 743 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 LMBR1Q8WVP7 490 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 LINC01599Q8WXQ3 324 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 RUBCNQ92622 972 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 GPKOWQ92917 476 aaPredicted RBP eCLIP8.39□□□□□ -1.07
HDLBP-222ENST00000449504 MS4A3Q96HJ5 214 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 RTP3Q9BQQ7 232 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 EHMT1Q9H9B1 1298 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 FBXL21Q9UKT6 434 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 RIF1Q5UIP0 2472 aaKnown RBP8.39□□□□□ -1.07
HDLBP-222ENST00000449504 CCDC171Q6TFL3 1326 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 FSD2A1L4K1 749 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 DHX16O60231 1041 aaKnown RBP8.38□□□□□ -1.07
HDLBP-222ENST00000449504 NPR3P17342 541 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 HOXB8P17481 243 aaPredicted RBP8.38□□□□□ -1.07
HDLBP-222ENST00000449504 RFX1P22670 979 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 NOVP48745 357 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 SP4Q02446 784 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 UBE3AQ05086 875 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 CDC37Q16543 378 aaPredicted RBP8.38□□□□□ -1.07
HDLBP-222ENST00000449504 FBXO47Q5MNV8 452 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
HDLBP-222ENST00000449504 TSHZ3Q63HK5 1081 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 TMEM184AQ6ZMB5 413 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 RSPH3Q86UC2 560 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 TDRD5Q8NAT2 981 aaKnown RBP8.38□□□□□ -1.07
HDLBP-222ENST00000449504 PANK1Q8TE04 598 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 DNAJB3Q8WWF6 145 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 USP26Q9BXU7 913 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 AGO3Q9H9G7 860 aaKnown RBP8.38□□□□□ -1.07
HDLBP-222ENST00000449504 VAT1LQ9HCJ6 419 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 ENTPD7Q9NQZ7 604 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 AAASQ9NRG9 546 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 ECHDC1Q9NTX5 307 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 MRPL11Q9Y3B7 192 aaKnown RBP8.38□□□□□ -1.07
HDLBP-222ENST00000449504 CDY2AQ9Y6F7 541 aa8.38□□□□□ -1.07
HDLBP-222ENST00000449504 DCDC2BA2VCK2 349 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 HIDE1A8MVS5 230 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 ATMINO43313 823 aaPredicted RBP8.37□□□□□ -1.07
HDLBP-222ENST00000449504 SCG2P13521 617 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 CA8P35219 290 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 ATXN1P54253 815 aaKnown RBP8.37□□□□□ -1.07
HDLBP-222ENST00000449504 MGAT3Q09327 533 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 KCNC3Q14003 757 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 TPRNQ4KMQ1 711 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 RARS2Q5T160 578 aaKnown RBP8.37□□□□□ -1.07
HDLBP-222ENST00000449504 KIAA0319Q5VV43 1072 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 PDE12Q6L8Q7 609 aaKnown RBP8.37□□□□□ -1.07
HDLBP-222ENST00000449504 KANK3Q6NY19 840 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 TSHZ1Q6ZSZ6 1077 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 SIRT2Q8IXJ6 389 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 SIX5Q8N196 739 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 C12orf76Q8N812 135 aaPredicted RBP8.37□□□□□ -1.07
HDLBP-222ENST00000449504 CASP10Q92851 521 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 NECTIN4Q96NY8 510 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 TCF25Q9BQ70 676 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 PDCD2LQ9BRP1 358 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 ADAM7Q9H2U9 754 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 ERVK-5Q9HDB9 667 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 HCSTQ9UBK5 93 aa8.37□□□□□ -1.07
HDLBP-222ENST00000449504 DBR1Q9UK59 544 aaKnown RBP8.37□□□□□ -1.07
HDLBP-222ENST00000449504 ZNF215Q9UL58 517 aaPredicted RBP8.37□□□□□ -1.07
HDLBP-222ENST00000449504 TBKBP1A7MCY6 615 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 FSCN2O14926 492 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 TGFB3P10600 412 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 HOXA13P31271 388 aaPredicted RBP8.36□□□□□ -1.07
HDLBP-222ENST00000449504 MTHFRP42898 656 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 ADAM17P78536 824 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 TMEM62Q0P6H9 643 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 QRICH1Q2TAL8 776 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 SPECC1Q5M775 1068 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 TAF2Q6P1X5 1199 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 ZC3H14Q6PJT7 736 aaKnown RBP8.36□□□□□ -1.07
HDLBP-222ENST00000449504 CYFIP1Q7L576 1253 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 TMC7Q7Z402 723 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 VSIG10LQ86VR7 867 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 ADGRF4Q8IZF3 695 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 ZDHHC14Q8IZN3 488 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 PLCD3Q8N3E9 789 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 IL31RAQ8NI17 732 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 FTHL17Q9BXU8 183 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 LRRCC1Q9C099 1032 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 FAM49AQ9H0Q0 323 aaPredicted RBP8.36□□□□□ -1.07
HDLBP-222ENST00000449504 PUF60Q9UHX1 559 aaKnown RBP8.36□□□□□ -1.07
HDLBP-222ENST00000449504 TELO2Q9Y4R8 837 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 PCDHB7Q9Y5E2 793 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 CACNA1GO43497 2377 aa8.36□□□□□ -1.07
HDLBP-222ENST00000449504 DMDP11532 3685 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 NRCAMQ92823 1304 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 ORC4O43929 436 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 CFHP08603 1231 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 SNHG28P0DPA3 235 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 C7P10643 843 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 MARK3P27448 753 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 CCND2P30279 289 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 IGBP1P78318 339 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 MRPS6P82932 125 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms