RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 BANK1Q8NDB2 785 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 RASSF8Q8NHQ8 419 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 PPTC7Q8NI37 304 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 LRRC15Q8TF66 581 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 SEPT1Q8WYJ6 367 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 CDK5RAP3Q96JB5 506 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 TIGD1Q96MW7 591 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 DDX19AQ9NUU7 478 aaKnown RBP15.75■□□□□ 0.11
SHMT2-203ENST00000449049 USP25Q9UHP3 1055 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 NOP56O00567 594 aaKnown RBP15.74■□□□□ 0.11
SHMT2-203ENST00000449049 ACTN4O43707 911 aaKnown RBP15.74■□□□□ 0.11
SHMT2-203ENST00000449049 LONRF3Q496Y0 759 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 OR6J1Q8NGC5 347 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 DHX58Q96C10 678 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 LXNQ9BS40 222 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 WDR81Q562E7 1941 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 IGSF9BQ9UPX0 1349 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 KINO60870 393 aaKnown RBP15.74■□□□□ 0.11
SHMT2-203ENST00000449049 LYPLA2O95372 231 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 INHAP05111 366 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 CCND3P30281 292 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-203ENST00000449049 TCF7P36402 384 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-203ENST00000449049 STAT6P42226 847 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 QARSP47897 775 aaKnown RBP15.74■□□□□ 0.11
SHMT2-203ENST00000449049 LBX1P52954 281 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 CTTNQ14247 550 aaKnown RBP15.74■□□□□ 0.11
SHMT2-203ENST00000449049 ZRSR1Q15695 479 aaKnown RBP15.74■□□□□ 0.11
SHMT2-203ENST00000449049 PDXDC2PQ6P474 469 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 POTEGQ6S5H5 508 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 TLK2Q86UE8 772 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 CCDC60Q8IWA6 550 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-203ENST00000449049 PLIN2Q99541 437 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 CUEDC2Q9H467 287 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 WRAP73Q9P2S5 460 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-203ENST00000449049 STK17AQ9UEE5 414 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 KIAA1024Q9UPX6 916 aa15.74■□□□□ 0.11
SHMT2-203ENST00000449049 EMSYQ7Z589 1322 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 DUSP11O75319 330 aaKnown RBP15.73■□□□□ 0.11
SHMT2-203ENST00000449049 LGR5O75473 907 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 SLFN14P0C7P3 912 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 HOXD8P13378 290 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-203ENST00000449049 PSMC5P62195 406 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 UGCGQ16739 394 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 KRBA2Q6ZNG9 492 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 CTU1Q7Z7A3 348 aaKnown RBP15.73■□□□□ 0.11
SHMT2-203ENST00000449049 TPH2Q8IWU9 490 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 AFAP1L1Q8TED9 768 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 AFG1LQ8WV93 481 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 LENG1Q96BZ8 264 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-203ENST00000449049 ZSWIM4Q9H7M6 989 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 BLOC1S4Q9NUP1 217 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 GABBR1Q9UBS5 961 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 SERTAD1Q9UHV2 236 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 SWSAP1Q6NVH7 229 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 KCNK18Q7Z418 384 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 C4orf19Q8IY42 314 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 ATP6V0A1Q93050 837 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 PCYT2Q99447 389 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 MAGEF1Q9HAY2 307 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 MAFBQ9Y5Q3 323 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-203ENST00000449049 PCNTO95613 3336 aa15.73■□□□□ 0.11
SHMT2-203ENST00000449049 A6NJR5 290 aa15.72■□□□□ 0.11
SHMT2-203ENST00000449049 DYNC1LI2O43237 492 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-203ENST00000449049 DKC1O60832 514 aaKnown RBP eCLIP15.72■□□□□ 0.11
SHMT2-203ENST00000449049 MMP3P08254 477 aa15.72■□□□□ 0.11
SHMT2-203ENST00000449049 CNGA1P29973 690 aa15.72■□□□□ 0.11
SHMT2-203ENST00000449049 NKX3-2P78367 333 aa15.72■□□□□ 0.11
SHMT2-203ENST00000449049 ELOA2Q8IYF1 753 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-203ENST00000449049 CNNM3Q8NE01 707 aa15.72■□□□□ 0.11
SHMT2-203ENST00000449049 RAD54LQ92698 747 aa15.72■□□□□ 0.11
SHMT2-203ENST00000449049 CLSTN2Q9H4D0 955 aa15.72■□□□□ 0.11
SHMT2-203ENST00000449049 ZNF302Q9NR11 478 aa15.72■□□□□ 0.11
SHMT2-203ENST00000449049 BACH1O14867 736 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 FAM160B1Q5W0V3 765 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 CEP57L1Q8IYX8 460 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 LARP4BQ92615 738 aaKnown RBP15.71■□□□□ 0.11
SHMT2-203ENST00000449049 NACC1Q96RE7 527 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 UPF3AQ9H1J1 476 aaKnown RBP15.71■□□□□ 0.11
SHMT2-203ENST00000449049 TMEM63CQ9P1W3 806 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 LOXHD1Q8IVV2 1947 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 E9PMD0 336 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 ZNF862O60290 1169 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 PPFIA4O75335 1185 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 GJA9P57773 515 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 PSMC6P62333 389 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 KANK3Q6NY19 840 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 SH3RF1Q7Z6J0 888 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 AP5M1Q9H0R1 490 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 KBTBD4Q9NVX7 518 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 DNM3Q9UQ16 869 aa15.71■□□□□ 0.11
SHMT2-203ENST00000449049 CEP350Q5VT06 3117 aa15.71■□□□□ 0.1
SHMT2-203ENST00000449049 SYNRGQ9UMZ2 1314 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 FRMPD3Q5JV73 1810 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 CTAGE5O15320 804 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 STBD1O95210 358 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 EYA4O95677 639 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 RARBP10826 455 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 XRCC6P12956 609 aaKnown RBP eCLIP15.7■□□□□ 0.1
SHMT2-203ENST00000449049 CPT1AP50416 773 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 STAT5BP51692 787 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms