RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 SETQ01105 290 aaPredicted RBP16.56■□□□□ 0.24
USP39-206ENST00000448971 MFSD10Q14728 455 aa16.56■□□□□ 0.24
USP39-206ENST00000448971 GALNT17Q6IS24 598 aa16.56■□□□□ 0.24
USP39-206ENST00000448971 HERC6Q8IVU3 1022 aa16.56■□□□□ 0.24
USP39-206ENST00000448971 RETREG2Q8NC44 543 aa16.56■□□□□ 0.24
USP39-206ENST00000448971 DAGLBQ8NCG7 672 aa16.56■□□□□ 0.24
USP39-206ENST00000448971 TBC1D32Q96NH3 1257 aa16.56■□□□□ 0.24
USP39-206ENST00000448971 SDF4Q9BRK5 362 aa16.56■□□□□ 0.24
USP39-206ENST00000448971 BCAS3Q9H6U6 928 aa16.56■□□□□ 0.24
USP39-206ENST00000448971 KCNH7Q9NS40 1196 aa16.56■□□□□ 0.24
USP39-206ENST00000448971 MAFGO15525 162 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 GTPBP6O43824 516 aaPredicted RBP16.55■□□□□ 0.24
USP39-206ENST00000448971 JAK2O60674 1132 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 LPXNO60711 386 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 ATP9AO75110 1047 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 HOXD8P13378 290 aaPredicted RBP16.55■□□□□ 0.24
USP39-206ENST00000448971 PSEN2P49810 448 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 FOSBP53539 338 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 ST3GAL1Q11201 340 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 BFSP2Q13515 415 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 SKIV2LQ15477 1246 aaKnown RBP16.55■□□□□ 0.24
USP39-206ENST00000448971 KIAA0753Q2KHM9 967 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 SPRED2Q7Z698 418 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 PLA2G4DQ86XP0 818 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 C7orf31Q8N865 590 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 CYP2W1Q8TAV3 490 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 KAT2BQ92831 832 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 ZSCAN31Q96LW9 406 aaPredicted RBP16.55■□□□□ 0.24
USP39-206ENST00000448971 GPR20Q99678 358 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 C1QTNF1Q9BXJ1 281 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 BRMS1Q9HCU9 246 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 JPH1Q9HDC5 661 aaPredicted RBP16.55■□□□□ 0.24
USP39-206ENST00000448971 SH2B1Q9NRF2 756 aaPredicted RBP16.55■□□□□ 0.24
USP39-206ENST00000448971 COG5Q9UP83 839 aa16.55■□□□□ 0.24
USP39-206ENST00000448971 DOCK5Q9H7D0 1870 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 FAM86B1E9PN63 330 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 PPFIA4O75335 1185 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 CYP3A4P08684 503 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 FAM86B2P0C5J1 330 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 ARP10275 920 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 TCF7P36402 384 aaPredicted RBP16.54■□□□□ 0.24
USP39-206ENST00000448971 PLA2G5P39877 138 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 TRIM29Q14134 588 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 UTP14CQ5TAP6 766 aaKnown RBP16.54■□□□□ 0.24
USP39-206ENST00000448971 NIPA1Q7RTP0 329 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 TRIM50Q86XT4 487 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 TBCKQ8TEA7 893 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 ARNTL2Q8WYA1 636 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 PHF20Q9BVI0 1012 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 FTOQ9C0B1 505 aaKnown RBP eCLIP16.54■□□□□ 0.24
USP39-206ENST00000448971 TCEAL9Q9UHQ7 104 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 ZNF215Q9UL58 517 aaPredicted RBP16.54■□□□□ 0.24
USP39-206ENST00000448971 PTPRSQ13332 1948 aa16.54■□□□□ 0.24
USP39-206ENST00000448971 CCDC194A0A1B0GVG4 234 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 KIF28PB7ZC32 967 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 DDX39AO00148 427 aaKnown RBP16.53■□□□□ 0.24
USP39-206ENST00000448971 BAIAP3O94812 1187 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 FDPSP14324 419 aaKnown RBP16.53■□□□□ 0.24
USP39-206ENST00000448971 GRB10Q13322 594 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 NONOQ15233 471 aaKnown RBP eCLIP16.53■□□□□ 0.24
USP39-206ENST00000448971 PTGISQ16647 500 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 PRR16Q569H4 304 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 KRT25Q7Z3Z0 450 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 SESTD1Q86VW0 696 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 CRYGNQ8WXF5 182 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 EPHX3Q9H6B9 360 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 AGO4Q9HCK5 861 aaKnown RBP16.53■□□□□ 0.24
USP39-206ENST00000448971 GJB4Q9NTQ9 266 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 SLC9A2Q9UBY0 812 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 TELO2Q9Y4R8 837 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 MYH7BA7E2Y1 1941 aa16.53■□□□□ 0.24
USP39-206ENST00000448971 TANC1Q9C0D5 1861 aa16.52■□□□□ 0.24
USP39-206ENST00000448971 NFASCO94856 1347 aa16.52■□□□□ 0.24
USP39-206ENST00000448971 IGLV3-22A0A075B6J6 115 aa16.52■□□□□ 0.24
USP39-206ENST00000448971 H3BRB1 525 aa16.52■□□□□ 0.24
USP39-206ENST00000448971 MEIS1O00470 390 aa16.52■□□□□ 0.24
USP39-206ENST00000448971 KRT2P35908 639 aa16.52■□□□□ 0.24
USP39-206ENST00000448971 ITGB3BPQ13352 177 aaPredicted RBP16.52■□□□□ 0.24
USP39-206ENST00000448971 NPY5RQ15761 445 aa16.52■□□□□ 0.24
USP39-206ENST00000448971 GDF6Q6KF10 455 aaPredicted RBP16.52■□□□□ 0.24
USP39-206ENST00000448971 SEPT1Q8WYJ6 367 aa16.52■□□□□ 0.24
USP39-206ENST00000448971 DHX38Q92620 1227 aaKnown RBP16.52■□□□□ 0.24
USP39-206ENST00000448971 HLA-CQ95604 372 aa16.52■□□□□ 0.24
USP39-206ENST00000448971 ZNF577Q9BSK1 485 aa16.52■□□□□ 0.24
USP39-206ENST00000448971 C16orf70Q9BSU1 422 aa16.52■□□□□ 0.24
USP39-206ENST00000448971 TUT1Q9H6E5 874 aaKnown RBP16.52■□□□□ 0.24
USP39-206ENST00000448971 HDAC6Q9UBN7 1215 aa16.52■□□□□ 0.24
USP39-206ENST00000448971 GTF2IRD1Q9UHL9 959 aa16.52■□□□□ 0.24
USP39-206ENST00000448971 LCHNA4D1U4 455 aa16.51■□□□□ 0.23
USP39-206ENST00000448971 HAS3O00219 553 aa16.51■□□□□ 0.23
USP39-206ENST00000448971 WDR5P61964 334 aaKnown RBP16.51■□□□□ 0.23
USP39-206ENST00000448971 RBL2Q08999 1139 aa16.51■□□□□ 0.23
USP39-206ENST00000448971 TMCO2Q7Z6W1 182 aaPredicted RBP16.51■□□□□ 0.23
USP39-206ENST00000448971 CAGE1Q8TC20 777 aa16.51■□□□□ 0.23
USP39-206ENST00000448971 AFAP1L1Q8TED9 768 aa16.51■□□□□ 0.23
USP39-206ENST00000448971 GLG1Q92896 1179 aa16.51■□□□□ 0.23
USP39-206ENST00000448971 UIMC1Q96RL1 719 aa16.51■□□□□ 0.23
USP39-206ENST00000448971 LLPHQ9BRT6 129 aaKnown RBP16.51■□□□□ 0.23
USP39-206ENST00000448971 BACH2Q9BYV9 841 aa16.51■□□□□ 0.23
USP39-206ENST00000448971 M0R2N6 131 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms